Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04435
- Subject:
- XR_001741341.1
- Aligned Length:
- 1163
- Identities:
- 663
- Gaps:
- 466
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCTTCCTCCTTTTCACGGCGTCTTGCATTACTATTGTGCGGCTGCAGGAGGTGTCGAGCGGCGTTATTTTTTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGGTTTGCCTTTTTTTTTCTTTTTTTTTTTTTTGGAACCGCGGTTGTTTAAAAGCCTGAGGGAACCTGGAGA 148
Query 1 -----------------------------------------------ATGGACAAAGTGTGTGCTGTTTTTGGA 27
|||||||||||||||||||||||||||
Sbjct 149 GGGGCTCCCACTCCCTACCCTCTTTCCTCCGAGTTTGTGACTCCGAGATGGACAAAGTGTGTGCTGTTTTTGGA 222
Query 28 GGCTCCCGAGGCATTGGCAGAGCTGTGGCCCAGTTAATGGCCCGGAAAGGCTACCGACTGGCGGTCATTGCCAG 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGCTCCCGAGGCATTGGCAGAGCTGTGGCCCAGTTAATGGCCCGGAAAGGCTACCGACTGGCGGTCATTGCCAG 296
Query 102 AAACCTGGAAGGGGCCAAAGCCGCCGCCGGTGACCTCGGCGGAGATCATTTGGCATTTAGCTGTGATGTTGCTA 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAACCTGGAAGGGGCCAAAGCCGCCGCCGGTGACCTCGGCGGAGATCATTTGGCATTTAGCTGTGATGTTGCTA 370
Query 176 AAGAACATGATGTTCAAAATACATTTGAAGAGCTGGAGAAACATTTAGGTCGAGTAAATTTCTTGGTAAATGCA 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGAACATGATGTTCAAAATACATTTGAAGAGCTGGAGAAACATTTAGGTCGAGTAAATTTCTTGGTAAATGCA 444
Query 250 GCTGGTATTAACAGGGATGGTCTTTTAGTAAGAACAAAAACTGAAGATATGGTATCTCAGCTTCATACTAACCT 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCTGGTATTAACAGGGATGGTCTTTTAGTAAGAACAAAAACTGAAGATATGGTATCTCAGCTTCATACTAACCT 518
Query 324 CTTGGGTTCCATGCTGACCTGTAAAGCTGCCATGAGGACTATGATTCAACAACAGGGAGGGTCTATTGTTAATG 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTGGGTTCCATGCTGACCTGTAAAGCTGCCATGAGGACTATGATTCAACAACAGGGAGGGTCTATTGTTAATG 592
Query 398 TAG------------------------------GAAGCATTGTTGGCTTAAAAGGCAACTCTGGCCAGTCCGTT 441
||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TAGGCCACAGAAGGGAGATGCTGCTCCATAAAAGAAGCATTGTTGGCTTAAAAGGCAACTCTGGCCAGTCCGTT 666
Query 442 TACAGTGCCAGTAAAGGAGGATTAGTTGGATTTTCACGTGCTCTTGCTAAAGAGGTAGCAAGAAAGAAAATTAG 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TACAGTGCCAGTAAAGGAGGATTAGTTGGATTTTCACGTGCTCTTGCTAAAGAGGTAGCAAGAAAGAAAATTAG 740
Query 516 AGTGAATGTAGTTGCACCAG-----------------GA--TTTG---------------------------TA 543
|||||||||||||||||||| || |||| ||
Sbjct 741 AGTGAATGTAGTTGCACCAGAGCTATCACAACCACTTGAATTTTGAAGAGGATCTTGAGCTCCAGATGAGAATA 814
Query 544 CA---CA-CAGATATGACGA------------AAGA-CTTGAA---AGAA------------------GAAC-- 577
|| || |.||||..|.|| |||| |.|||| |||| ||||
Sbjct 815 CAGTCCAGCTGATACAATGATTTTAGCTTTATAAGATCCTGAACAGAGAACCCAGCTACATCCTGCCCGAACTT 888
Query 578 -ATTTAAAGAA-------AAAT--AT---TCCTCTTGGGAGGTTTGGA---------------GAAACTATTGA 623
|||||.|||| ||.| || |||.||| |..|.|||| |.|||...|||
Sbjct 889 GATTTACAGAACTGTTTGAACTGCATGGGTCCACTT---ATATATGGATTTTCTTCCGCTTCTGCAACCCCTGA 959
Query 624 GGT-GGCA----CATGCGGTTGTGT--TTCT-TTTAGAATCACCGTATATT----ACA--GGGCATG------- 676
|.| .||| ||..|..||||.| |||| ||.|| |.|||..|| ||| ||| |.|.|||
Sbjct 960 GATAAGCAAGACCAACCCCTTGTCTTCTTCTCTTCAG-ACCACTCTA-ATTTAAGACAATGAGGATGAAGACCT 1031
Query 677 TTCTGGT-----------AGTGGATGGGGGATTACAACTCATTTTG---------------------------- 711
||.||.| |.|..|| |.||| |||||||
Sbjct 1032 TTATGATGACCCACTTCCACTTAAT---GAATT--AACTCAT----CCCAAGAACAGTATCCATAAGGAAGATG 1096
Query 712 ----------------------------------------------------- 711
Sbjct 1097 GAAAAGGGGGACAGAATAAATGTTACCCTAAGAAGTCCAGAGCAACATGGTAC 1149
