Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04487
• Subject: NM_001001877.1
• Aligned Length: 1212
• Identities: 574
• Gaps: 612

Alignment

Query    1  ATGGCACATGTTTCTTCAGAAACTCAAGATGTTTCCCCCAAAGATGAATTAACTGCTTCAGAAGCCTCCACTAG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCACATGTTTCTTCAGAAACTCAAGATGTTTCCCCCAAAGATGAATTAACTGCTTCAGAAGCCTCCACTAG  74

Query   75  GTCTCCATTGTGTGAACACACCTTCCCTGGGGACTCAGACTTACGGTCAATGATTGAAGAACATGCTTTTCAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GTCTCCATTGTGTGAACACACCTTCCCTGGGGACTCAGACTTACGGTCAATGATTGAAGAACATGCTTTTCAGG  148

Query  149  TTTTGTCACAAGGATCCTTGTTAGAAAGTCCAAGTTACACAGTTTGTGTCTCTGAGCCAGATAAAGATGATGAT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTTTGTCACAAGGATCCTTGTTAGAAAGTCCAAGTTACACAGTTTGTGTCTCTGAGCCAGATAAAGATGATGAT  222

Query  223  TTTCTTTCTCTGAACTTTCCCAGGAAACTTTGGAAAATAGTGGAAAGTGACCAATTCAAGTCTATTTCATGGGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTTCTTTCTCTGAACTTTCCCAGGAAACTTTGGAAAATAGTGGAAAGTGACCAATTCAAGTCTATTTCATGGGA  296

Query  297  TGAGAATGGAACTTGCATAGTGATTAATGAAGAACTCTTCAAGAAAGAAATTTTGGAAACAAAGGCTCCTTACA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGAGAATGGAACTTGCATAGTGATTAATGAAGAACTCTTCAAGAAAGAAATTTTGGAAACAAAGGCTCCTTACA  370

Query  371  GAATATTTCAAACTGATGCTATCAAAAGTTTTGTTCGACAGCTCAACCTTTATGGATTTAGTAAAATTCAACAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAATATTTCAAACTGATGCTATCAAAAGTTTTGTTCGACAGCTCAACCTTTATGGATTTAGTAAAATTCAACAG  444

Query  445  AATTTTCAAAGATCTGCCTTTCTAGCCACCTTTCTGTCAGAAGAGAAAGAATCGTCTGTCTTAAGCAAGTTAAA  518
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||..
Sbjct  445  AATTTTCAAAGATCTGCCTTTCTAGCCACCTTTCTGTCAGAAGAGAAAGAATCGTCTGTCTTAAGCAAGATACG  518

Query  519  GTTCTATTATAATCCAAATTTCAAGCGTGGCTATCCCCAACTTTTAGTAAGAGTGAAGAGAAGAATTGGTGTTA  592
            .||| |..|.|||..||.||||.||       |||..||||||         .||||.|.|.|.|||..||||.
Sbjct  519  CTTC-ACCAAAATGAAACTTTCCAG-------ATCTTCAACTT---------ATGAAAACAGGTATTTATGTTG  575

Query  593  AAAATGCTTCACCTATATCTAC-TTTATTCAACGAAGATT--------TCAACAAGAAGCATTTTAGAGCAGGG  657
            .||.|              ||| ||||   ||.||.||.|        |||                       
Sbjct  576  CAACT--------------TACATTTA---AAAGATGAGTCGAATTACTCA-----------------------  609

Query  658  GCTAACATGGAGAATCATAATTCTGCCTTAGCTGCTGAAGCTAGTGAAGAAAGTTTATTTTCAGCCTCTAAAAA  731
                                                                                      
Sbjct  610  --------------------------------------------------------------------------  609

Query  732  TTTAAATATGCCTCTAACAAGGGAATCTTCTGTCAGACAGATAATTGCAAATTCATCTGTCCCCATTAGAAGTG  805
                                                                                      
Sbjct  610  --------------------------------------------------------------------------  609

Query  806  GTTTCCCTCCTCCTTCACCTTCAACCTCAGTTGGACCATCAGAACAAATTGCAACAGATCAACATGCTATTTTA  879
                                                                                      
Sbjct  610  --------------------------------------------------------------------------  609

Query  880  AATCAGTTGACCACTATTCATATGCACTCTCATAGTACCTACATGCAAGCAAGGGGCCACATTGTGAATTTTAT  953
                                                                                      
Sbjct  610  --------------------------------------------------------------------------  609

Query  954  TACAACCACAACTTCTCAATACCACATCATATCTCCCTTACAAAATGGTTATTTTGGGCTGACAGTGGAACCAT  1027
                                                                                      
Sbjct  610  --------------------------------------------------------------------------  609

Query 1028  CTGCTGTTCCCACACGATATCCTCTGGTATCAGTCAATGAGGCTCCATATCGTAACATGCTACCAGCAGGCAAC  1101
                                                                                      
Sbjct  610  --------------------------------------------------------------------------  609

Query 1102  CCGTGGTTGCAAATGCCTACGATCGCTGATAGATCAGCTGCCCCTCATTCCAGGCTAGCTCTTCAACCATCACC  1175
                                                                                      
Sbjct  610  --------------------------------------------------------------------------  609

Query 1176  ACTGGACAAATATCACCCTAATTACAAC  1203
                                        
Sbjct  610  ----------------------------  609