Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04637
- Subject:
- NR_046406.1
- Aligned Length:
- 3065
- Identities:
- 1062
- Gaps:
- 2003
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCTAGTGGCGGCAGGTGCAGGTGGCCGCGCGGCATCCTGGGGCTTGCAGTCTCCCGAGCGTTCTGTTGTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTGCCTACAATTTTAGGGAACCTAATAAAAGGGTGGTCGGTATGTTTTTATTTGGGTGTGTACTTTTGTTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCGCTTTTTCGCTATGCATTAAGTACGGACTTTAGGACTCAACTAGTACCAGGAAGAAAAAGACCGGACATTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCACCTGTTTGTTATACAGCGAAGGGGAAAAATTGGGAAGAAATCCTCAAGCTACAAGAAAAATAACCAGAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTACACTTTAGCCTGCAGTGACTTATATCCTGGTGTCCTAAGTCCACCTAAGTCAGTTTTGCAATAAGAGGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCAAGTTTGGTTTTCTTGGAGCTTGCATCAGTTGGTTGCATCATCCCTGAGTAGAAGATTTGCGGTTGCAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAATAAGGTACAGAGCTTCTCCAGCGGGAAAGTGCATGTCTGCACGGCACGAGCCCACGCACCGCAGAACAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTGCCAGGTCTCCTCAGAGACCCTCGCAGGAACCTAACAATGAAATCCAGTTGTCCAGTCTTGATTTGTGGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGTAAGGAGAATCCGAGGCCAGTGGGCAATCCGCCCACTGTTGGGAGCGACTGACCTCACGAATCAATAATTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTTTTGACTAGGAAGTGCAGCGGTTCTTGGGGGGAGGGGCTGGACTGGGTGGCGGACGCGAGGAGCAACGGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCCCGAACCTCTCCCCCGCCCCTACTATCTTGGCCTACATTTTCCCGCTCCGTCCCGGGACCTGGACACCCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATCCACGAAAAGCAACTCGCGCTCGAGAACAGCTCTCGTACCCTTCTACGTGATCTGCACCTTTAAGCTCACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCATCCCAAACCGGACCCCGGAGGCACCACCCACATCCGTCTAACATCACTTCCTTCAGAGTTTGAAAAAAAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATCTGGGAAGTAGAGGTGTTGTGCTGAGCGGCGCTCGGCGAACTGTGTGGACCGTCTGCTGGGACTCCGGCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCGTCCGCTCAGCCCCGTGGCCCCGCGCACCTACTGCCATGGAGACGCGGCCTCGTCTCGGGGCCACCTGTTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGGGCTTCAGTTTCCTGCTCCTCGTCATCTCTTCTGATGGACATAATGGGCTTGGAAAGGGTTTTGGAGATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATATTCATTGGAGGACACTGGAAGATGGGAAGAAAGAAGCAGCTGCCAGCTGAACCTGGGCCTAGCTGGCGTAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AACTCCTGTTTCCATAGAAACAAGAGGGTCTGTAAAAGTCAAGGGAGACAGGAAGAGCAGTTTGCACTTCCGGC 1332
Query 1 --------------------------------------------------------------------ATGCCG 6
||||||
Sbjct 1333 TTACGTCGGAGACGCGTACAACCCGGAAGTTGGCGCAGCGCGGTTGCCAATGGTCGCTCCCTGAGAGGATGCCG 1406
Query 7 CTCGTGGTGTTTTGCGGGCTGCCGTACAGCGGCAAGAGCCGGCGTGCTGAAGAGTTGCGCGTGGCGCTGGCTGC 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CTCGTGGTGTTTTGCGGGCTGCCGTACAGCGGCAAGAGCCGGCGTGCTGAAGAGTTGCGCGTGGCGCTGGCTGC 1480
Query 81 CGAGGGCCGCGCGGTGTACGTGGTGGACGACGCAGCTGTCCTGGGCGCAGAGGACCCAGCGGTGTACGGCGATT 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGAGGGCCGCGCGGTGTACGTGGTGGACGACGCAGCTGTCCTGGGCGCAGAGGACCCAGCGGTGTACGGCGATT 1554
Query 155 CTGCCCGTGAGAAGGCATTGCGTGGAGCTCTGCGAGCCTCCGTGGAACGGCGCCTGAGTCGCCACGACGTGGTC 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTGCCCGTGAGAAGGCATTGCGTGGAGCTCTGCGAGCCTCCGTGGAACGGCGCCTGAGTCGCCACGACGTGGTC 1628
Query 229 ATCCTGGACTCGCTTAACTACATCAAAGGTTTCCGTTACGAGCTCTACTGCCTGGCACGGGCGGCGCGCACCCC 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ATCCTGGACTCGCTTAACTACATCAAAGGTTTCCGTTACGAGCTCTACTGCCTGGCACGGGCGGCGCGCACCCC 1702
Query 303 GCTCTGCCTGGTCTACTGCGTACGGCCCGGCGGCCCGATCGCGGGACCTCAGGTGGCGGGCGCGAACGAGAACC 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GCTCTGCCTGGTCTACTGCGTACGGCCCGGCGGCCCGATCGCGGGACCTCAGGTGGCGGGCGCGAACGAGAACC 1776
Query 377 CTGGCCGGAACGTCAGTGTGAGTTGGCGGCCACGCGCTGAGGAGGACGGGAGAGCCCAGGCGGCGGGCAGCAGC 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTGGCCGGAACGTCAGTGTGAGTTGGCGGCCACGCGCTGAGGAGGACGGGAGAGCCCAGGCGGCGGGCAGCAGC 1850
Query 451 GTCCTCAGGGAACTGCATACTGCGGACTCTGTAGTAAATGGAAGTGCCCAGGCCGACGTACCCAAGGAACTGGA 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GTCCTCAGGGAACTGCATACTGCGGACTCTGTAGTAAATGGAAGTGCCCAGGCCGACGTACCCAAGGAACTGGA 1924
Query 525 GCGAGAAGAATCCGGGGCTGCGGAGTCTCCAGCTCTTGTGACTCCGGATTCAGAGAAATCTGCAAAGCATGGGT 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GCGAGAAGAATCCGGGGCTGCGGAGTCTCCAGCTCTTGTGACTCCGGATTCAGAGAAATCTGCAAAGCATGGGT 1998
Query 599 CCGGTGCCTTTTACTCTCCCGAACTCCTGGAGGCCCTAACGCTGCGCTTTGAGGCTCCCGATTCTCGGAATCGC 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CCGGTGCCTTTTACTCTCCCGAACTCCTGGAGGCCCTAACGCTGCGCTTTGAGGCTCCCGATTCTCGGAATCGC 2072
Query 673 TGGGACCGGCCTTTATTCACTTTGGTGGGCCTAGAGGAGCCGTTGCCCCTGGCGGGGATCCGCTCTGCCCTGTT 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGGGACCGGCCTTTATTCACTTTGGTGGGCCTAGAGGAGCCGTTGCCCCTGGCGGGGATCCGCTCTGCCCTGTT 2146
Query 747 TGAGAACCGGGCCCCACCACCCCATCAGTCTACGCAGTCCCAGCCCCTCGCCTCCGGCAGCTTTCTGCACCAGT 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TGAGAACCGGGCCCCACCACCCCATCAGTCTACGCAGTCCCAGCCCCTCGCCTCCGGCAGCTTTCTGCACCAGT 2220
Query 821 TGGACCAGGTCACGAGTCAAGTACTGGCCGGATTGATGGAAGCGCAGAAGAGCGCTGTCCCCGGGGACTTGCTC 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TGGACCAGGTCACGAGTCAAGTACTGGCCGGATTGATGGAAGCGCAGAAGAGCGCTGTCCCCGGGGACTTGCTC 2294
Query 895 ACGCTTCCTGGTACCACAGAGCACTTGCGGTTTACCCGGCCCTTGACCATGGCAGAACTGAGTCGCCTTCGTCG 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 ACGCTTCCTGGTACCACAGAGCACTTGCGGTTTACCCGGCCCTTGACCATGGCAGAACTGAGTCGCCTTCGTCG 2368
Query 969 CCAGTTTATTTCGTACACTAAAATGCATCCCAACAATGAGAACTTGCCGCAACTGGCCAACATGTTTCTTCAGT 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CCAGTTTATTTCGTACACTAAAATGCATCCCAACAATGAGAACTTGCCGCAACTGGCCAACATGTTTCTTCAGT 2442
Query 1043 ATTTGAGCCAGAGCCTGCAC------------------------------------------------------ 1062
||||||||||||||||||||
Sbjct 2443 ATTTGAGCCAGAGCCTGCACTGACCAGAGGAGGTAGGGGGGAAGCCATGGCTTCTGATCTCCACTCCACTTTAT 2516
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2517 TTCTCTGGGAAAAATAGGCTGCAGGTCTCCAGAGCATATCGATGCAGTACTGTACTAGAGCTGTTGTGACTGAT 2590
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2591 TCACTCAAACTTTCCTGCATACCCCTGTGCCAGGCCTTGGGTTTACAGCATAAGTTCAGACTAAAGAGAATGGA 2664
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2665 GAACTATTGTGGTGCAACCTGGCAAATCCCTCAGAGGACAGAGCTAAGGTGGACAGGGATTACCTAGATTGGAT 2738
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2739 CCTACTTGGGCTATCACAGAGCATTGACCATTGGCTTCCCTCATCTGAGGCGTGGGAGAGCAGACTGGATAGAT 2812
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2813 GAGAATTGTTTTAAAACAATTGTGAACAGAAACTGAAGATGGTACAGTTCTACATCTGCACCTGCCCTTTTTTC 2886
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2887 ATACCACAAAAGTATTTTTTGAGTACTGTACTGACTTTTTGCTAGTTTCTATTCTGGGACCGAGTTCACAGATA 2960
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2961 AATCCATTGGTTTGTATCCTTGAGAAACTTTGTTTTTGTGGAAGTAAGAAAGTTATCTACTAGATTATTTCCTC 3034
Query 1063 ------------------------------- 1062
Sbjct 3035 TAATAAAATCTTTTAAAATAGTCTACTGGAA 3065
