Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04659
Subject:
XM_011246395.2
Aligned Length:
1932
Identities:
1497
Gaps:
219

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGTAACAGCCACCCTCTTCGCCCCTTTACTGCAGTGGGGGAAATCGATCATGTGCACATTTTGTCTGAGCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TATTGGTGCCTTGTTGATTGGTGAAGAATATGGTGATGTCACGTTTGTTGTGGAAAAGAAGCACTTTCCTGCCC  148

Query    1  --------------------ATGTGC---------AGAGCATTATTATATGGTGGAATGCGAGAGTCTCAGCCT  45
                                |.||||         .||||||||.|.|||||.||.|||||||||||.|||||.
Sbjct  149  ACAGGGTAATTTTAGCAGCGAGGTGCCAATATTTTCGAGCATTACTGTATGGCGGGATGCGAGAGTCGCAGCCC  222

Query   46  GAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAAGCATTCACAATGCTACTCAAATATATCTACACTGGGCG  119
            ||||||||.||.|||||||||||||||||.||.||.||.|||||.|||||.||||.||||||||||||.|||||
Sbjct  223  GAAGCAGAGATCCCTCTCCAAGACACCACGGCCGAGGCTTTCACGATGCTCCTCAGATATATCTACACGGGGCG  296

Query  120  GGCAACGCTGACAGATGAGAAGGAGGAGGTGCTGCTGGACTTTTTGAGCCTGGCTCATAAATATGGATTTCCAG  193
            |||.|||||.||.|||||||||||||||||||||||||||||..|||||||||||||.|||||.||||||||||
Sbjct  297  GGCGACGCTCACTGATGAGAAGGAGGAGGTGCTGCTGGACTTCCTGAGCCTGGCTCACAAATACGGATTTCCAG  370

Query  194  AGCTAGAGGATTCTACCTCTGAGTATCTCTGCACCATACTTAACATTCAGAATGTCTGCATGACTTTTGATGTT  267
            ||||.|||||.|||||.|||||||||||||||||||||||.|||||||||||||||||.|||||.|||||||||
Sbjct  371  AGCTGGAGGACTCTACTTCTGAGTATCTCTGCACCATACTGAACATTCAGAATGTCTGTATGACCTTTGATGTT  444

Query  268  GCCAGTCTCTACTCACTTCCCAAGTTAACTTGTATGTGCTGCATGTTTATGGATAGGAATGCTCAGGAAGTCCT  341
            ||||||||||||||.||||||||||||||||||||||||||||||||.|||||.||.|||||||||||.||.||
Sbjct  445  GCCAGTCTCTACTCGCTTCCCAAGTTAACTTGTATGTGCTGCATGTTCATGGACAGAAATGCTCAGGAGGTGCT  518

Query  342  CTCAAGTGAAGGTTTCCTCTCCCTTTCTAAGACAGCACTTTTAAACATCGTGTTAAGAGACTCATTTGCAGCTC  415
            ..|.||.||.||.|||||||||||.||.|||||||||||..|.||.|||||.||||||||.||.|||||.||||
Sbjct  519  GGCCAGCGACGGCTTCCTCTCCCTGTCCAAGACAGCACTCCTGAATATCGTCTTAAGAGATTCGTTTGCTGCTC  592

Query  416  CCGAAAAAGATATTTTCCTAGCCTTATTAAACTGGTGTAAGCACAATTCAAAGGAGAATCATGCTGAAATCATG  489
            |.||.||||||||||||.|||||||.|||||||||||||||||||||.||||.|||||||||||||||||||||
Sbjct  593  CTGAGAAAGATATTTTCTTAGCCTTGTTAAACTGGTGTAAGCACAATGCAAAAGAGAATCATGCTGAAATCATG  666

Query  490  CAGGCTGTGCGTTTACCTCTCATGAGCCTCACAGAGCTTCTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCC  563
            |||||||||||.||||||||.|||||||||||.|||||||||||.||.||||||||.||||||||..|||||||
Sbjct  667  CAGGCTGTGCGCTTACCTCTAATGAGCCTCACTGAGCTTCTGAACGTCGTGAGGCCATCAGGACTCTTGTCTCC  740

Query  564  TGATGCCATCCTGGATGCCATTAAAGTGCGATCTGAGAGCCGGGATATGGACCTCAATTATAGAGGCATGCTCA  637
            .|||||.||.||.||||||||.||||||||.||.|||||||||||||||||||||||.||.|||||||||||||
Sbjct  741  GGATGCTATTCTTGATGCCATCAAAGTGCGGTCGGAGAGCCGGGATATGGACCTCAACTACAGAGGCATGCTCA  814

Query  638  TACCAGAAGAAAACATTGCAACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAGCTGAAATCAGCCTTATTA  711
            ||||.|||||||||||||||||||||||||||||.||.||.|||||.||.||.||||||||.||.|||||..|.
Sbjct  815  TACCTGAAGAAAACATTGCAACTATGAAGTATGGGGCTCAGGTTGTGAAAGGAGAGCTGAAGTCGGCCTTGCTG  888

Query  712  GATGGTGATACTCAAAATTATGATTTGGATCATGGATTTTCAAGGCACCCAATTGATGATGACTGCCGTTCCGG  785
            ||||||||.||||||||.|||||.|||||||||||||||||..|||||||.|||||||||||||||||.||.||
Sbjct  889  GATGGTGACACTCAAAACTATGACTTGGATCATGGATTTTCCCGGCACCCCATTGATGATGACTGCCGCTCTGG  962

Query  786  CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAATCACATACGGATACTCTTGTGGGACCGAGATAGCCGGT  859
            |||.|||||.|||||.||.|||||.||||||||.||.||||||||..|||||.||||||||||.||.|||||||
Sbjct  963  CATTGAGATCAAGCTTGGCCAGCCGTCCATTATAAACCACATACGTCTACTCCTGTGGGACCGTGACAGCCGGT  1036

Query  860  CTTACTCATACTTCATTGAAGTGTCAATGGATGAACTTGATTGGGTCAGAGTGATAGATCATTCACAATATCTG  933
            ||||.||.|||||.|||||||||||.|||||.||||||||||||.||||||||||.|||||.|||||.||.|||
Sbjct 1037  CTTATTCCTACTTTATTGAAGTGTCCATGGACGAACTTGATTGGATCAGAGTGATCGATCACTCACATTACCTG  1110

Query  934  TGTCGTTCTTGGCAGAAATTATATTTTCCAGCCCGTGTCTGCAGTGGAGATGGA-GTCTCACTATGGTGCCCAC  1006
            |||||.||||||||.||.||.|||||.|||||||||||||||||       ||| .|||..|.|.|.|||    
Sbjct 1111  TGTCGGTCTTGGCAAAAGTTGTATTTCCCAGCCCGTGTCTGCAG-------GGACCTCTTGCCAGGATGC----  1173

Query 1007  TCTGGTCTCG--AACTCCTGAGCTCAAG----CAATCCTCCCTCCTTGGCCTTCCAAAGTG--CAGGTATATTC  1072
                ||.|.|  ||.||  .||..||||    |||..||                ||||.|  .||||||||.|
Sbjct 1174  ----GTGTGGGAAAATC--AAGGACAAGGACACAAAGCT----------------AAAGAGATAAGGTATATCC  1225

Query 1073  GAATTGTTGGGACTCACAACACAGTGAACAAGATTTTTCACATTGTGGCTTTTGAATGTATGTTTACAAACAAA  1146
            ||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct 1226  GAATAGTTGGGACTCACAACACAGTGAACAAGATTTTCCACATTGTGGCTTTTGAATGCATGTTTACAAACAAA  1299

Query 1147  ACCTTCACTCTTGAGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGTGAT  1220
            .|||||||.||.||||||||.||||||||||||.||||||||||.|||||.||.||.|||||||||||||||||
Sbjct 1300  GCCTTCACCCTGGAGAAGGGCCTGATAGTTCCCCTGGAGAATGTGGCAACGATCGCAGATTGTGCCAGTGTGAT  1373

Query 1221  TGAAGGAGTCAGTCGGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAATTATGACTGGGATTCTGGCTACA  1294
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1374  TGAAGGAGTCAGTCGGAGCCGGAATGCCTTGCTGAATGGGGACACTAAGAATTATGACTGGGACTCTGGCTACA  1447

Query 1295  CATGTCACCAGCTAGGAAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTACATGATTGGGTCAATACGGTTA  1368
            |.||.||||||||.||.||||||||.||||||||||||.|||||||.||.|||||.|||||.||||||||||||
Sbjct 1448  CGTGCCACCAGCTGGGCAGTGGTGCCATTGTGGTTCAGCTGGCACAGCCATACATAATTGGCTCAATACGGTTA  1521

Query 1369  CTACTTTGGGATTGTGATGATCGAAGCTATAGCTACTACGTTGAGGTTTCTACCAACCAGCAACAGTGGACCAT  1442
            .||||.|||||.||.||||||||||||||.||||||||.|||||||||||.|||||.|||||.|||||||||||
Sbjct 1522  TTACTCTGGGACTGCGATGATCGAAGCTACAGCTACTATGTTGAGGTTTCCACCAATCAGCAGCAGTGGACCAT  1595

Query 1443  GGTTGCTGACAGAACTAAAGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCA  1516
            |||.||.||||||||.|||||.|||||||||||||||||||||||.|||||||||||.||||||||.|||||||
Sbjct 1596  GGTGGCCGACAGAACGAAAGTGTCCTGCAAGTCCTGGCAGTCAGTCACTTTTGAAAGACAGCCTGCATCCTTCA  1669

Query 1517  TCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCAGAGCAGCAG  1590
            ||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1670  TCCGAATCGTCGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCGGAGCAGCAG  1743

Query 1591  AGCAGCCAGAAGGAGGAAAATAGTGAGGAATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGCAGCTCGACTC  1664
            ||||.||||||||||||.|..||||||||..|.||||||||||||.|||||....||..|||||||||||||.|
Sbjct 1744  AGCAACCAGAAGGAGGACAGCAGTGAGGAGCCAGGGACAGGGGACCCCAGCACCCCCAATCAGCAGCTCGACCC  1817

Query 1665  CCATGCGCTGCGGGCGCCTAGTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGC  1738
            .|||||.|..|||||.||.||.|.||||||||||||..|.||.||||||.|.|||||||||||.|||||||..|
Sbjct 1818  TCATGCACCACGGGCACCCAGCGCCAGCTCACTACCACCGAGTCCAGGCCCTAACTCACGCTCACCCAACCAAC  1891

Query 1739  AGCACCAA  1746
            ||.|||||
Sbjct 1892  AGAACCAA  1899

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