Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04667
- Subject:
- NR_037951.1
- Aligned Length:
- 3816
- Identities:
- 736
- Gaps:
- 3063
Alignment
Query 1 ATGCTTTGGAGGCAGCTCATCTATTGGCAACTGCTGGCTTTGTTTTTCCTCCCTTTTTGCCTGTGTCAAGATGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ATACATGGAGGTGAGCGGAAGAACTAATAAAGTGGTGGCAAGAATAGTGCAAAGCC----ACCAGCAGACTGGC 144
|| ||.|||| ||| .|||.|...||.||
Sbjct 1 ----------------------------------GT-----GAGTAGT-----GCCTCCTCCCATCTCTCTTGC 30
Query 145 -CGTAGCGG-CTCCAGGAGGGAGAAAGTGAGAGAGCGGAGCC--ATCCTAAAACTGGGACTGTGGATAATAACA 214
|.| || ||| |..|||| ||| ||| .|||| |.|| ||
Sbjct 31 TCCT---GGTCTC----------ATCGTGA-----CGG-GCCTGGTCCT--------GCCT-----------CA 66
Query 215 C-TTCTAC--AGACCTAAAATCCCTGAGACCAGATGAGCTACCGCACCCCGAGGTAGATGACCTAGC-CCAGAT 284
| ||||.| .|| |||| ||||| |||.|||| ||| | |||||
Sbjct 67 CTTTCTGCCATGA-CTAA-----------------GAGCT------CCCTGAGG-------CCT--CTCCAGA- 106
Query 285 CACCACATTCTGGGGCCAGTCTCCACAAACCGGAGGACTACCCCCAGACTGCAGTAAGTGTTGTCATGGAGACT 358
..||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107 --------------AGCAGTCTCCACAAACCGGAGGACTACCCCCAGACTGCAGTAAGTGTTGTCATGGAGACT 166
Query 359 ACAGCTTTCGAGGCTACCAAGGCCCCCCTGGGCCACCGGGCCCTCCTGGCATTCCAGGAAACCATGGAAACAAT 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 ACAGCTTTCGAGGCTACCAAGGCCCCCCTGGGCCACCGGGCCCTCCTGGCATTCCAGGAAACCATGGAAACAAT 240
Query 433 GGCAACAATGGAGCCACTGGTCATGAAGGAGCCAAAGGTGAGAAGGGCGACAAAGGTGACCTGGGGCCTCGAGG 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GGCAACAATGGAGCCACTGGTCATGAAGGAGCCAAAGGTGAGAAGGGCGACAAAGGTGACCTGGGGCCTCGAGG 314
Query 507 GGAGCGGGGGCAGCATGGCCCCAAAGGAGAGAAGGGCTACCCGGGGATTCCACCAGAACTTCAGATTGCATTCA 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 GGAGCGGGGGCAGCATGGCCCCAAAGGAGAGAAGGGCTACCCGGGGATTCCACCAGAACTTCAGATTGCATTCA 388
Query 581 TGGCTTCTCTGGCAACCCACTTCAGCAATCAGAACAGTGGGATTATCTTCAGCAGTGTTGAGACCAACATTGGA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 389 TGGCTTCTCTGGCAACCCACTTCAGCAATCAGAACAGTGGGATTATCTTCAGCAGTGTTGAGACCAACATTGGA 462
Query 655 AACTTCTTTGATGTCATGACTGGTAGATTTGGGGCCCCAGTATCAGGTGTGTATTTCTTCACCTTCAGCATGAT 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 463 AACTTCTTTGATGTCATGACTGGTAGATTTGGGGCCCCAGTATCAGGTGTGTATTTCTTCACCTTCAGCATGAT 536
Query 729 GAAGCATGAGGATGTTGAGGAAGTGTATGTGTACCTTATGCACAATGGCAACACAGTCTTCAGCATGTACAGCT 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 GAAGCATGAGGATGTTGAGGAAGTGTATGTGTACCTTATGCACAATGGCAACACAGTCTTCAGCATGTACAGCT 610
Query 803 ATGAAATGAAGGGCAAATCAGATACATCCAGCAATCATGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTTGG 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 ATGAAATGAAGGGCAAATCAGATACATCCAGCAATCATGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTTGG 684
Query 877 CTGCGAATGGGCAATGGCGCTCTCCATGGGGACCACCAACGCTTCTCCACCTTTGCAGGATTCCTGCTCTTTGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 685 CTGCGAATGGGCAATGGCGCTCTCCATGGGGACCACCAACGCTTCTCCACCTTTGCAGGATTCCTGCTCTTTGA 758
Query 951 AACTAAG------------------------------------------------------------------- 957
|||||||
Sbjct 759 AACTAAGTGTCATGGAGAAACTCCAGCTGGGCCCAGAGATTCTGCAGCGGGAAAATCCAAGGCTTATTTATGCC 832
Query 958 -------------------------------------------------------------------------- 957
Sbjct 833 AGGCTGAGTGGATTTGGCCAGTCAGGAAGCTTCTGCCGGTTAGCTGGCCACGATATCAACTATTTGGCTTTGTC 906
Query 958 -------------------------------------------------------------------------- 957
Sbjct 907 AGGTGGAAGGAACAGCATATTTAAGTTCTTTTCTGTGGAAAACTCAGAAATTGAGTCTGTGGGAAGCACCTCGA 980
Query 958 -------------------------------------------------------------------------- 957
Sbjct 981 GGACAGAACATGTTGGATGGTGGAGCACCTTTCTATACGACTTACAGGACAGCAGATGGGGAATTCATGGCTGT 1054
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1055 TGGAGCAATAGAACCCCAGTTCTACGAGCTGCTGATCAAAGGACTTGGACTAAAGTCTGATGAACTTCCCAATC 1128
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1129 AGATGAGCATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGATGTATTTGCAGAGAAGACGAAGGCAGAG 1202
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1203 TGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGA 1276
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1277 TCACAACAAGGAACGGGGCTCGTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGT 1350
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1351 TAAACACCCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAGGAGATACTTGAAGAA 1424
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1425 TTTGGATTCAGCCGCGAAGAGATTTATCAGCTTAACTCAGATAAAATCATTGAAAGTAATAAGGTAAAAGCTAG 1498
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1499 TCTCTAACTTCCAGGCCCACGGCTCAAGTGAATTTGAATACTGCATTTACAGTGTAGAGTAACACATAACATTG 1572
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1573 TATGCATGGAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA 1646
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1647 TTCTACAGTGATGATTGAATTCTAAAAATGGTTATCATTAGGGCTTTTGATTTATAAAACTTTGGGTACTTATA 1720
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1721 CTAAATTATGGTAGTTATTCTGCCTTCCAGTTTGCTTGATATATTTGTTGATATTAAGATTCTTGACTTATATT 1794
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1795 TTGAATGGGTTCTAGTGAAAAAGGAATGATATATTCTTGAAGACATCGATATACATTTATTTACACTCTTGATT 1868
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1869 CTACAATGTAGAAAATGAGGAAATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTG 1942
Query 958 -------------------------------------------------------------------------- 957
Sbjct 1943 CATCCAGGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAAGCACATTCCAAACTTTAGCAACAGTTATCACAC 2016
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2017 TTTGTAATTTGCAAAGAAAAGTTTCACCTGTATTGAATCAGAATGCCTTCAACTGAAAAAAACATATCCAAAAT 2090
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2091 AATGAGGAAATGTGTTGGCTCACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAA 2164
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2165 CTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTCCATGTGTTTGATTTCTCCTCAGGC 2238
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2239 TGGTAGCAAGTTCTGGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGATCTCAGGACCCCCCAGCAA 2312
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2313 GTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACCTGTCTTTGACAAAGAAGACGGGA 2386
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2387 TTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAACTTCCTAAAGGCATGTGAGGAAGGGG 2460
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2461 TAGATTCCACAATCTAATCCGGGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATA 2534
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2535 AGGTCCATTCTGCGCAGTATCTCAACTGCCGTTCAACAATCGCAAGAGGAAGGTGGAGCAGGTTTCTTCATCTT 2608
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2609 ACAGTTGAGAAAACAGAGACTCAGAAGGGCTTCTTAGTTCATGTTTCCCTTAGCGCCTCAGTGATTTTTTCATG 2682
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2683 GTGGCTTAGGCCAAAAGAAATATCTAACCATTCAATTTATAAATAATTAGGTCCCCAACGAATTAAATATTATG 2756
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2757 TCCTACCAACTTATTAGCTGCTTGAAAAATATAATACACATAAATAAAAAAATATATTTTTCATTTCTATTTCA 2830
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2831 TTGTTAATCACAACTACTTACTAAGGAGATGTATGCACCTATTGGACACTGTGCAACTTCTCACCTGGAATGAG 2904
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2905 ATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCATATAGTACTTGATTTTTTATCAGATGGCCT 2978
Query 958 -------------------------------------------------------------------------- 957
Sbjct 2979 GGAAAACCCAGTCTCACAAAAATATGAAATTATCAGAAGGATTATAGTGCAATCTTATGTTGAAAGAATGAACT 3052
Query 958 -------------------------------------------------------------------------- 957
Sbjct 3053 ACCTCACTAGTAGTTCACGTGATGTCTGACAGATGTTGAGTTTCATTGTGTTTGTGTGTTCAAATTTTTAAATA 3126
Query 958 -------------------------------------------------------------------------- 957
Sbjct 3127 TTCTGAGATACTCTTGTGAGGTCACTCTAATGCCCTGGGTGCCTTGGCACAGTTTTAGAAATACCAGTTGAAAA 3200
Query 958 -------------------------------------------------------------------------- 957
Sbjct 3201 TATTTGCTCAGGAATATGCAACTAGGAAGGGGCAGAATCAGAATTTAAGCTTTCATATTCTAGCCTTCAGTCTT 3274
Query 958 -------------------------------------------------------------------------- 957
Sbjct 3275 GTTCTTCAACCATTTTTAGGAACTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGC 3348
Query 958 -------------------------------------------------------------------------- 957
Sbjct 3349 CAAGAGTTCGAGACCAGCCTGGGGAACTTGGCTGGACCTCCGTTTCTACGAAATAAAAATAAAAAAATTATCCA 3422
Query 958 -------------------------------------------------------------------------- 957
Sbjct 3423 GGTATGGTGGTGTGTGCCTGTAGTCCTATCTACTCAAGGGTGGGGCAGGAGGATCACTTGAGCCCAGGAATTTG 3496
Query 958 -------------------------------------------------------------------------- 957
Sbjct 3497 AGGCCACAGTGAATTAGGATTGCACCACTGCACTCTAGCCCAGGCAACAGAACAAGAACCTGTCTCTAAATAAA 3570
Query 958 ------------------------------------------ 957
Sbjct 3571 TAAATAAAAATAATAATAATAAAAAAGATGTTTTCCCTACAA 3612
