Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04787
• Subject: NM_001282489.3
• Aligned Length: 1383
• Identities: 1074
• Gaps: 309

Alignment

Query    1  ATGAACGACCAGTACCACCGGGCAGCCCGGGATGGCTACCTGGAGCTCCTCAAGGAGGCCACCCGAAAGGAGCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAATGCCCCCGACGAGGATGGCATGACCCCCACTCTCTGGGCTGCCTACCATGGCAACCTCGAGTCGCTGCGTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCATTGTGAGCCGCGGGGGTGACCCGGACAAGTGTGACATCTGGGGCAACACACCCCTGCATCTGGCAGCTTCC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AATGGCCACTTGCACTGCCTGTCCTTCCTGGTGTCCTTCGGAGCCAACATCTGGTGCCTAGACAACGACTACCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CACGCCGCTGGACATGGCTGCCATGAAGGGCCACATGGAATGCGTGCGCTACCTGGACTCCATCGCGGCCAAGC  370
                         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  -------------ATGGCTGCCATGAAGGGCCACATGGAATGCGTGCGCTACCTGGACTCCATCGCGGCCAAGC  61

Query  371  AGAGCAGCCTCAACCCCAAGCTGGTGGGTAAGCTGAAGGACAAGGCCTTCCGCGAGGCGGAGCGGCGCATCCGC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   62  AGAGCAGCCTCAACCCCAAGCTGGTGGGTAAGCTGAAGGACAAGGCCTTCCGCGAGGCGGAGCGGCGCATCCGC  135

Query  445  GAGTGCGCCAAGCTGCAGCGGAGGCACCACGAACGCATGGAGCGGCGATACCGGCGCGAGCTGGCCGAGCGTTC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  136  GAGTGCGCCAAGCTGCAGCGGAGGCACCACGAACGCATGGAGCGGCGATACCGGCGCGAGCTGGCCGAGCGTTC  209

Query  519  CGACACCCTCAGCTTCTCCAGCCTCACGTCCAGCACCCTGAGCCGCCGGCTGCAGCATCTGGCGCTGGGCAGCC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  210  CGACACCCTCAGCTTCTCCAGCCTCACGTCCAGCACCCTGAGCCGCCGGCTGCAGCATCTGGCGCTGGGCAGCC  283

Query  593  ACCTGCCGTACTCTCAGGCCACGCTGCACGGCACGGCCAGGGGCAAGACCAAGATGCAGAAGAAGCTGGAGCGG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  284  ACCTGCCGTACTCTCAGGCCACGCTGCACGGCACGGCCAGGGGCAAGACCAAGATGCAGAAGAAGCTGGAGCGG  357

Query  667  CGCAAGCAGGGCGGCGAAGGCACCTTCAAGGTCTCCGAGGATGGGCGCAAGAGCGCCCGCTCGCTCTCGGGCCT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  358  CGCAAGCAGGGCGGCGAAGGCACCTTCAAGGTCTCCGAGGATGGGCGCAAGAGCGCCCGCTCGCTCTCGGGCCT  431

Query  741  GCAGCTGGGCAGCGACGTGATGTTCGTGCGCCAGGGCACCTACGCCAATCCCAAGGAGTGGGGCCGAGCCCCGC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  432  GCAGCTGGGCAGCGACGTGATGTTCGTGCGCCAGGGCACCTACGCCAATCCCAAGGAGTGGGGCCGAGCCCCGC  505

Query  815  TCCGGGACATGTTCCTCTCGGACGAGGACAGCGTCTCCCGTGCCACGCTGGCGGCCGAGCCTGCCCACTCGGAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  506  TCCGGGACATGTTCCTCTCGGACGAGGACAGCGTCTCCCGTGCCACGCTGGCGGCCGAGCCTGCCCACTCGGAG  579

Query  889  GTCAGCACCGACTCAGGCCACGACTCCCTGTTTACCCGCCCCGGCCTGGGCACCATGGTGTTCCGCAGAAATTA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  580  GTCAGCACCGACTCAGGCCACGACTCCCTGTTTACCCGCCCCGGCCTGGGCACCATGGTGTTCCGCAGAAATTA  653

Query  963  CTTGAGCAGTGGGCTGCACGGACTGGGCCGCGAGGATGGGGGTCTGGATGGGGTGGGAGCGCCGCGGGGTCGGC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  654  CTTGAGCAGTGGGCTGCACGGACTGGGCCGCGAGGATGGGGGTCTGGATGGGGTGGGAGCGCCGCGGGGTCGGC  727

Query 1037  TGCAGAGCTCCCCCAGCCTGGACGATGACAGCCTGGGCAGTGCCAACAGCCTGCAGGACCGCAGCTGTGGGGAG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  728  TGCAGAGCTCCCCCAGCCTGGACGATGACAGCCTGGGCAGTGCCAACAGCCTGCAGGACCGCAGCTGTGGGGAG  801

Query 1111  GAGCTGCCCTGGGATGAGCTCGATTTAGGCTTGGACGAGGACCTGGAGCCCGAGACTAGCCCGCTGGAGACCTT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  802  GAGCTGCCCTGGGATGAGCTCGATTTAGGCTTGGACGAGGACCTGGAGCCCGAGACTAGCCCGCTGGAGACCTT  875

Query 1185  CCTGGCCTCTCTGCACATGGAGGACTTTGCCGCCCTCCTGCGGCAGGAGAAGATCGACCTCGAGGCTTTGATGC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  876  CCTGGCCTCTCTGCACATGGAGGACTTTGCCGCCCTCCTGCGGCAGGAGAAGATCGACCTCGAGGCTTTGATGC  949

Query 1259  TGTGCTCTGACCTCGACCTCCGCAGCATCAGCGTCCCACTGGGGCCCCGAAAGAAGATCTTGGGGGCCGTGAGG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  950  TGTGCTCTGACCTCGACCTCCGCAGCATCAGCGTCCCACTGGGGCCCCGAAAGAAGATCTTGGGGGCCGTGAGG  1023

Query 1333  AGGCGGCGGCAGGCGATGGAGCGCCCGCCGGCCCTGGAGGACACAGAGCTA  1383
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1024  AGGCGGCGGCAGGCGATGGAGCGCCCGCCGGCCCTGGAGGACACAGAGCTA  1074