Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04788
- Subject:
- NR_144475.1
- Aligned Length:
- 2576
- Identities:
- 624
- Gaps:
- 1928
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCGCTCTCCGCGTTCTTCCAGCGCTGTCTTTTTAGTACCACATGCGCAGGCAGGTGATGGCGGCGCTGGTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATCCGGGGCAGCGGAGCAGGGCGGCCGAGACGGCCCTGGCAGAGGTCGGGCCCCTCGGGGCCGCGTGGCCAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGATCCCCCCTGAGATCCTGAAGAACCCTCAGCTGCAGGCAGCAATCCGGGTCCTGCCTTCCAACTACAACTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAGATCCCCAAGACCATCTGGAGGATCCAACAAGCCCAGGCCAAGAAGGTGGCCTTGCAAATGCCGGAAGGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCTCCTCTTTGCCTGTACCATTGTGGATATCTTGGAAAGGTTCACGGAGGCCGAAGTGATGGTGATGGGTGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGACCTACGGGGCTTGCTGTGTGGATGACTTCACAGCGAGGGCCCTGGGAGCTGACTTCTTGGTGCACTACGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCACAGTTGCCTGATTCCCATGGACACCTCGGCCCAAGACTTCCGGGTGCTGTACGTCTTTGTGGACATCCGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGACACTACACACCTCCTGGACTCTCTCCGCCTCACCTTTCCCCCAGCCACTGCCCTTGCCCTGGCAGCCGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGGAGCTGAAAGCCGAGTATCGTGTGAGTGTCCCACAGTGCAAGCCCCTGTCCCCTGGAGAGATCCTGGGCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACATCCCCCCGACTGTCCAAAGAGGTGGAGGCCGTTGTACGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGGCGCGATCTCAGCTCACTGCAAGCTACGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTGGGACTACAGGCGCCCGTCACCACACCCAGCTAAGTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTACAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGTGAGCCACCGCGCCCGGCCAGCCCTGTGGACTTCTAAGCCAGCGAGTGCCTCTTCTGCTGCCCTAAACCACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTTAGCCTCCTTTCCACCCCTGCAGGTATCTTGGAGATGGCCGCTTCCATCTGGAGTCTGTCATGATTGCCAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCAATGTCCCCGCTTACCGGTATGACCCATATAGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAGGCTGCTCGCCAAGAAGCCATAGCCACTGCCCGCTCAGCTAAGTCCTGGGGCCTTATTCTGGGCACTTTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCCGCCAGGGCAGTCCTAAGATCCTGGAGCACCTGGAATCTCGACTCCGAGCCTTGGGCCTTTCCTTTGTGAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGCTGCTCTCTGAGATCTTCCCCAGCAAGCTTAGCCTACTTCCTGAGGTGGATGTGTGGGTGCAGGTGGCATG 1406
Query 1 --------------------------------------ATGGCCGC-GCAGCGACCC----------------- 18
| ||||| ||.|..||||
Sbjct 1407 TCCACGTCTCTCCATTGACTGGGGCACAGCCTTCCCCAA--GCCGCTGCTGACACCCTATGAGGCGGCCGTGGC 1478
Query 19 -CTGCGGGTCCTGTGCCTGGC----------------GGGCTT-----CCGGCAGAGCGAGC-----GGGGCTT 65
|||.|||.|.| |.|||||| ||.||| |.||| ||| |||||
Sbjct 1479 TCTGAGGGACAT-TTCCTGGCAGCAGCCCTACCCGATGGACTTCTACGCTGGC------AGCTCCTTGGGGC-- 1543
Query 66 CC------GTGA--------GAAGACCG---------------GG--------GCGCTGAGGAAGGCGC-TGCG 101
|| |||| .|.||||| || ||||.|.||||||.|| .|.|
Sbjct 1544 CCTGGACGGTGAACCACGGCCAGGACCGCCGTCCCCACGCCCCGGGCCGGCCCGCGCGGGGGAAGGTGCAGGAG 1617
Query 102 GGGT-CGCGC---------CGAGCTCGTG---TGC-----CT-CAGCGGCCCGCAC------------CC---- 140
|||| ||||| || || |||| ||| || ||||.||..|.|| ||
Sbjct 1618 GGGTCCGCGCGTCCCCCTTCG-GC-CGTGGCTTGCGAGGACTGCAGCTGCAGGGACGAGAAGGTGGCGCCGCTG 1689
Query 141 GGTCCCCGAC---CCCCCGGGCCCCGAGGGCGCCAGATCAGACTTCGGGTCCTGCCCTCCGGAGGAGCAGCCTC 211
|.|||..||| |.|||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1690 GCTCCTTGACGCGCTCCCGGGCC--------------TCA------GGGTCCTGCCCTCCGGAGGAGCAGCCTC 1743
Query 212 GAGGCTGGTGGTTTTCAGAGCAGGAGGCCGACGTTTTCTCCGCATTGGAAGAGCCCGCCGTCTGCAGGGGCCTG 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1744 GAGGCTGGTGGTTTTCAGAGCAGGAGGCCGACGTTTTCTCCGCATTGGAAGAGCCCGCCGTCTGCAGGGGCCTG 1817
Query 286 GAGGAATCACTGGGGATGGTGGCACAGGCACTGAACAGGCTGGGGCCTTTTGACGGCCTTCTTGGTTTCAGCCA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1818 GAGGAATCACTGGGGATGGTGGCACAGGCACTGAACAGGCTGGGGCCTTTTGACGGCCTTCTTGGTTTCAGCCA 1891
Query 360 AGGGGCTGCGCTAGCAGCCCTTGTGTGTGCCCTGGGCCAGGCAGGCGATCCCCGCTTCCCCTTGCCACGGTTTA 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1892 AGGGGCTGCGCTAGCAGCCCTTGTGTGTGCCCTGGGCCAGGCAGGCGATCCCCGCTTCCCCTTGCCACGGTTTA 1965
Query 434 TCCTCTTGGTGTCTGGTTTCTGTCCCCGGGGCATTGGGTTCAAGGAATCCATCCTGCAAAGGCCCTTGTCATTG 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1966 TCCTCTTGGTGTCTGGTTTCTGTCCCCGGGGCATTGGGTTCAAGGAATCCATCCTGCAAAGGCCCTTGTCATTG 2039
Query 508 CCTTCGCTCCATGTTTTTGGGGACACTGACAAAGTCATCCCCTCTCAGGAGAGTGTGCAACTGGCCAGCCAATT 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 CCTTCGCTCCATGTTTTTGGGGACACTGACAAAGTCATCCCCTCTCAGGAGAGTGTGCAACTGGCCAGCCAATT 2113
Query 582 TCCCGGAGCCATCACCCTCACCCACTCTGGTGGCCACTTCATTCCAGCAGCTGCACCCCAGCGTCAGGCCTACC 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2114 TCCCGGAGCCATCACCCTCACCCACTCTGGTGGCCACTTCATTCCAGCAGCTGCACCCCAGCGTCAGGCCTACC 2187
Query 656 TCAAGTTCTTGGACCAGTTTGCAGAG------------------------------------------------ 681
||||||||||||||||||||||||||
Sbjct 2188 TCAAGTTCTTGGACCAGTTTGCAGAGTGAAAGATCAAGAAATGTCTCTGCTCCTACATCCAGCTCCTCTAGGGG 2261
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2262 CAGCCTCCGTCATCCATGCCCTCCCAGGACCCTCCACTCACTGCTGTGAGTGCGCCTCACCAGAACCAGTTAAG 2335
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2336 AGACAACTATCAATTCTTGAGACCCAAATTATAAGGGCCCTGCCCTGTACTGAAGAAAAGGGGAGCACAAGGCC 2409
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2410 TTAATGGACATTGACTTGTGAAAACGCAAACATGAATATGGTTGGAGAGCCCTGGATTAGGAGGGTGACATGGG 2483
Query 682 ------------------------------------------------------------ 681
Sbjct 2484 GAAGGCAGAGGCTGGCACCATGGTGACTGCCACATAATAAAGTGGTGATTTGGATTTTGA 2543
