Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04788
- Subject:
- NR_144476.1
- Aligned Length:
- 2635
- Identities:
- 624
- Gaps:
- 1987
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCGCTCTCCGCGTTCTTCCAGCGCTGTCTTTTTAGTACCACATGCGCAGGCAGGTGATGGCGGCGCTGGTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATCCGGGGCAGCGGAGCAGGGCGGCCGAGACGGCCCTGGCAGAGGTCGGGCCCCTCGGGGCCGCGTGGCCAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGATCCCCCCTGAGATCCTGAAGAACCCTCAGCTGCAGGCAGCAATCCGGGTCCTGCCTTCCAACTACAACTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAGATCCCCAAGACCATCTGGAGGATCCAACAAGCCCAGGCCAAGAAGGTGGCCTTGCAAATGCCGGAAGGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCTCCTCTTTGCCTGTACCATTGTGGATATCTTGGAAAGGTTCACGGAGGCCGAAGTGATGGTGATGGGTGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGACCTACGGGGCTTGCTGTGTGGATGACTTCACAGCGAGGGCCCTGGGAGCTGACTTCTTGGTGCACTACGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCACAGTTGCCTGATTCCCATGGACACCTCGGCCCAAGACTTCCGGGTGCTGTACGTCTTTGTGGACATCCGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGACACTACACACCTCCTGGACTCTCTCCGCCTCACCTTTCCCCCAGCCACTGCCCTTGCCCTGGTCAGCACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATTCAGTTTGTGTCGACCTTGCAGGCAGCCGCCCAGGAGCTGAAAGCCGAGTATCGTGTGAGTGTCCCACAGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAAGCCCCTGTCCCCTGGAGAGATCCTGGGCTGCACATCCCCCCGACTGTCCAAAGAGGTGGAGGCCGTTGTGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGTTAAAAATGGGGGCCAAGTAAGTCCTAGAGACATGCGTGTACCCTGGGAGGGAGCCTGAGGTTCATCATCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGAAAGAAACCAAATCTAATGCTCCTTACCTGTGAGCCCGAGGTCACACTGCAAGGTAGGGACCAAACAGGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAGACCTCAGGTTTACTGTCGCTTTCTCCACTGCCCAGTCCATCATCCAGAAGGCTGTGCAGGGTGGGGGCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAATCAGAGGGCCTGATGGGGGTTGAGGGTGGGCTGGAAATGGTGGGAATATAATTGGAGAAGATGGATGGGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGCCCAGGCTGCAGCCCCATTAATTTACCATCCGGACAGCTAACAAGCAGAAGCAGCGTGTCTCCTGCCGCCTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTATTTTAGGTATCTTGGAGATGGCCGCTTCCATCTGGAGTCTGTCATGATTGCCAACCCCAATGTCCCCGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TACCGGTATGACCCATATAGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCATGCAGGCTGCTCGCCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAAGCCATAGCCACTGCCCGCTCAGCTAAGTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCAGTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTAAGATCCTGGAGCACCTGGAATCTCGACTCCGAGCCTTGGGCCTTTCCTTTGTGAGGCTGCTGCTCTCTGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATCTTCCCCAGCAAGCTTAGCCTACTTCCTGAGGTGGATGTGTGGGTGCAGGTGGCATGTCCACGTCTCTCCAT 1480
Query 1 -----------------------ATGGCCGC-GCAGCGACCC------------------CTGCGGGTCCTGTG 32
| ||||| ||.|..|||| |||.|||.|.| |.
Sbjct 1481 TGACTGGGGCACAGCCTTCCCCAA--GCCGCTGCTGACACCCTATGAGGCGGCCGTGGCTCTGAGGGACAT-TT 1551
Query 33 CCTGGC----------------GGGCTT-----CCGGCAGAGCGAGC-----GGGGCTTCC------GTGA--- 71
|||||| ||.||| |.||| ||| ||||| || ||||
Sbjct 1552 CCTGGCAGCAGCCCTACCCGATGGACTTCTACGCTGGC------AGCTCCTTGGGGC--CCTGGACGGTGAACC 1617
Query 72 -----GAAGACCG---------------GG--------GCGCTGAGGAAGGCGC-TGCGGGGT-CGCGC----- 110
.|.||||| || ||||.|.||||||.|| .|.||||| |||||
Sbjct 1618 ACGGCCAGGACCGCCGTCCCCACGCCCCGGGCCGGCCCGCGCGGGGGAAGGTGCAGGAGGGGTCCGCGCGTCCC 1691
Query 111 ----CGAGCTCGTG---TGC-----CT-CAGCGGCCCGCAC------------CC----GGTCCCCGAC---CC 152
|| || |||| ||| || ||||.||..|.|| || |.|||..||| |.
Sbjct 1692 CCTTCG-GC-CGTGGCTTGCGAGGACTGCAGCTGCAGGGACGAGAAGGTGGCGCCGCTGGCTCCTTGACGCGCT 1763
Query 153 CCCGGGCCCCGAGGGCGCCAGATCAGACTTCGGGTCCTGCCCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTT 226
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1764 CCCGGGCC--------------TCA------GGGTCCTGCCCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTT 1817
Query 227 CAGAGCAGGAGGCCGACGTTTTCTCCGCATTGGAAGAGCCCGCCGTCTGCAGGGGCCTGGAGGAATCACTGGGG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1818 CAGAGCAGGAGGCCGACGTTTTCTCCGCATTGGAAGAGCCCGCCGTCTGCAGGGGCCTGGAGGAATCACTGGGG 1891
Query 301 ATGGTGGCACAGGCACTGAACAGGCTGGGGCCTTTTGACGGCCTTCTTGGTTTCAGCCAAGGGGCTGCGCTAGC 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1892 ATGGTGGCACAGGCACTGAACAGGCTGGGGCCTTTTGACGGCCTTCTTGGTTTCAGCCAAGGGGCTGCGCTAGC 1965
Query 375 AGCCCTTGTGTGTGCCCTGGGCCAGGCAGGCGATCCCCGCTTCCCCTTGCCACGGTTTATCCTCTTGGTGTCTG 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1966 AGCCCTTGTGTGTGCCCTGGGCCAGGCAGGCGATCCCCGCTTCCCCTTGCCACGGTTTATCCTCTTGGTGTCTG 2039
Query 449 GTTTCTGTCCCCGGGGCATTGGGTTCAAGGAATCCATCCTGCAAAGGCCCTTGTCATTGCCTTCGCTCCATGTT 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 GTTTCTGTCCCCGGGGCATTGGGTTCAAGGAATCCATCCTGCAAAGGCCCTTGTCATTGCCTTCGCTCCATGTT 2113
Query 523 TTTGGGGACACTGACAAAGTCATCCCCTCTCAGGAGAGTGTGCAACTGGCCAGCCAATTTCCCGGAGCCATCAC 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2114 TTTGGGGACACTGACAAAGTCATCCCCTCTCAGGAGAGTGTGCAACTGGCCAGCCAATTTCCCGGAGCCATCAC 2187
Query 597 CCTCACCCACTCTGGTGGCCACTTCATTCCAGCAGCTGCACCCCAGCGTCAGGCCTACCTCAAGTTCTTGGACC 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2188 CCTCACCCACTCTGGTGGCCACTTCATTCCAGCAGCTGCACCCCAGCGTCAGGCCTACCTCAAGTTCTTGGACC 2261
Query 671 AGTTTGCAGAG--------------------------------------------------------------- 681
|||||||||||
Sbjct 2262 AGTTTGCAGAGTGAAAGATCAAGAAATGTCTCTGCTCCTACATCCAGCTCCTCTAGGGGCAGCCTCCGTCATCC 2335
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2336 ATGCCCTCCCAGGACCCTCCACTCACTGCTGTGAGTGCGCCTCACCAGAACCAGTTAAGAGACAACTATCAATT 2409
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2410 CTTGAGACCCAAATTATAAGGGCCCTGCCCTGTACTGAAGAAAAGGGGAGCACAAGGCCTTAATGGACATTGAC 2483
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2484 TTGTGAAAACGCAAACATGAATATGGTTGGAGAGCCCTGGATTAGGAGGGTGACATGGGGAAGGCAGAGGCTGG 2557
Query 682 --------------------------------------------- 681
Sbjct 2558 CACCATGGTGACTGCCACATAATAAAGTGGTGATTTGGATTTTGA 2602
