Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04817
- Subject:
- XM_006501253.3
- Aligned Length:
- 1358
- Identities:
- 798
- Gaps:
- 433
Alignment
Query 1 ATGTCTTTGGTGGACTTGGGAAAGAGGTTGCTAGAAGCAGCAAGAAAAGGCCAAGATGATGAAGTGAGAACGTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GATGGCAAATGGCGCCCCATTCACCACAGACTGGCTTGGAACATCACCCCTCCACCTTGCAGCTCAATATGGTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATTATTCCACAGCAGAAGTACTCCTTCGAGCAGGTGTTAGCAGGGATGCCCGGACTAAAGTAGACAGGACCCCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTGCACATGGCTGCAGCCGATGGACATGCGCACATCGTGGAACTGCTTGTTCGGAATGGTGCAGATGTGAATGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAAGGACATGCTGAAGATGACAGCTTTGCATTGGGCCACAGAGCGCCACCATCGAGATGTCGTAGAGTTACTTA 370
||||||.|||||||||||.||||.|||||||||||||.|||.||.||.||||||||.||||||||||
Sbjct 1 -------ATGCTGCAGATGACAGCTCTGCACTGGGCCACAGAGCACCATCACCGGGATGTCGTCGAGTTACTTA 67
Query 371 TCAAATATGGAGCTGATGTCCATGCTTTCAGCAAATTTGATAAATCAGCCTTTGACATAGCTCTGGAGAAAAAC 444
||||||||||||||||||||.|.|||||.||||||||||||||.||.||||||||||||||..|||||||||||
Sbjct 68 TCAAATATGGAGCTGATGTCTACGCTTTTAGCAAATTTGATAAGTCTGCCTTTGACATAGCAATGGAGAAAAAC 141
Query 445 AATGCTGAGATTTTGGTCATCCTCCAGGAAGCAATGCAGAATCAGGTGAATGTTAATCCA-GAGAGAGCCAACC 517
|||.||||||||||||||||.||.||||||||||||||||||||||||||...||| ||| |||||||||||||
Sbjct 142 AATACTGAGATTTTGGTCATGCTTCAGGAAGCAATGCAGAATCAGGTGAACACTAA-CCACGAGAGAGCCAACC 214
Query 518 CTGTGACTGACCCTGTGAGTATGGCTGCTCCATTCATCTTCACGTCGGGTGAGGTTGTTAACCTCGCAAGCCTT 591
|.|||.||.|||||||||.|.||.|||||||.|||||||||||.||.||.|||||..||||||||||.|||.||
Sbjct 215 CAGTGGCTAACCCTGTGACTGTGACTGCTCCGTTCATCTTCACCTCTGGAGAGGTCATTAACCTCGCTAGCTTT 288
Query 592 ATTTCTTCAACCAACACCAAAACAACCTCAGGTGACCCCCATGCCTCAACAGTACAGTTTTCAAATTCTACCAC 665
.|.||||||.|||||||||||.||||||||| |||| |||
Sbjct 289 GTCTCTTCAGCCAACACCAAAGCAACCTCAG-------------CTCA---------TTT-------------- 326
Query 666 CTCAGTGCTGGCTACCCTTGCAGCTCTTGCTGAGGCATCAGTCCCCCTCTCCAACTCACACAGAGCCACAGCCA 739
Sbjct 327 -------------------------------------------------------------------------- 326
Query 740 ATACAGAGGAAATTATAGAAGGAAATTCCGTTGACTCATCAATCCAGCAAGTAATGGGGAGTGGAGGCCAGAGG 813
|||.|||||...||||||||||||..|||||||.||.|.|||||||||..||||||||||||||||||||
Sbjct 327 ----AGAAGAAATGGAAGAAGGAAATTCTCTTGACTCCTCGACCCAGCAAGTGGTGGGGAGTGGAGGCCAGAGG 396
Query 814 GTCATCACCATAGTGACTGATGGAGTCCCTCTGGGTAATATCCAAACTTCAATCCCTACTGGAGGCATTGGCCA 887
|||||||||||.||||||||||||||||||||||||||.||||||||.|||.|||||.||||||||||||||||
Sbjct 397 GTCATCACCATCGTGACTGATGGAGTCCCTCTGGGTAACATCCAAACATCACTCCCTGCTGGAGGCATTGGCCA 470
Query 888 GCCATTTATTGTAACTGTGCAAGATGGACAGCAAGTTCTAACTGTACCTGCTGGTAAGGTTGCAGAGGAGACTG 961
||||||||||||||||.||||||||||||||||||||||||||||.|||||||||.||||||||||||||||..
Sbjct 471 GCCATTTATTGTAACTATGCAAGATGGACAGCAAGTTCTAACTGTGCCTGCTGGTCAGGTTGCAGAGGAGACAA 544
Query 962 TAATTAAAGAGGAA------GAAGAAGAGAAGTTGCCACTAACAAAGAAACCAAGGATAGGAGAGAAGACAAAC 1029
|||||.||||.||| |||||||||||.||||||.|....||||.|||||||||.|.|||||.|||||||
Sbjct 545 TAATTGAAGATGAAGAAGAGGAAGAAGAGAAATTGCCATTGGTGAAGAGACCAAGGATGGCAGAGATGACAAAC 618
Query 1030 AGTGTGGAGGAAAGCAAGGAAGGCAATGAAAGAGAGCTACTACAGCAACAACTCCAGGAGGCCAATCGAAGAGC 1103
||.||.|||||||..||||||||||.|||||||||||||||.||||||||.||||||||||||||.||||||||
Sbjct 619 AGGGTTGAGGAAATGAAGGAAGGCAGTGAAAGAGAGCTACTGCAGCAACAGCTCCAGGAGGCCAACCGAAGAGC 692
Query 1104 CCAGGAATACCGACACCAGCTCCTAAAGAAAGAGCAGGAAGCAGAACAGTACCGTCTTAAGCTGGAGGCCATAG 1177
||||||.|||.|||||||||||||.||||||||||||||.||.||.|||||.||.||.|.|||||||||.||.|
Sbjct 693 CCAGGAGTACAGACACCAGCTCCTCAAGAAAGAGCAGGAGGCCGAGCAGTATCGGCTCAGGCTGGAGGCTATGG 766
Query 1178 CCCGACAGCAGCCCAA------TGGAGTTGATTTCACCATGGTTGAAGAGGTGGCTGAGGTAGATGCTGTAGTA 1245
|.|..||||||.|||| ||.|||||||.|||||.|.|||||.||.||.|||||.||.|||||||||||.
Sbjct 767 CTCAGCAGCAGACCAACGGAGTTGAAGTTGATGTCACCGTAGTTGAGGAAGTAGCTGAAGTGGATGCTGTAGTG 840
Query 1246 GTCACAGAGGGGGAGTTGGAAGAGAGAGAGACAAAAGTGACTG-GGTCAGCAGGGACCACAGAGCCTCACACTA 1318
||.|||||.|||||...||.|||.||||..|||.||||.| || .|||||.|.|||||||.|||||||||||||
Sbjct 841 GTGACAGAAGGGGACGAGGTAGAAAGAGCAACACAAGTCA-TGAAGTCAGGAAGGACCACGGAGCCTCACACTA 913
Query 1319 GAGTTTCCATGGCAACTGTTTCATCT 1344
..||||||||.|.||||.|||||||.
Sbjct 914 ACGTTTCCATAGAAACTATTTCATCC 939