Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04839
- Subject:
- NR_160940.1
- Aligned Length:
- 2193
- Identities:
- 341
- Gaps:
- 1816
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTATCAATGAGACAGCATGGCCCGTACTAAGCAGACTGCCCGCAAGTCGACCGGCGGCAAGGCCCCGAGGAAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCTGGCTACCAAAGCGGCCCGCAAGAGCGCGCCGGCCACGGGCGGGGTGAAGAAGCCGCACCGCTACCGGCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACCGTGGCTCTGCGGGAGATCTGGCGCTACCAGAAGTCTACGGAGCTGCTGATCCGCAAGCTGCCCTTCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGCTGGTACGCGAGATCGCGCAGGACTTTAAGACGGACCTGCGCTTCCAGAGCTCGGCCGTGACGGCGCTGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGCAGGAGGCCAGCGAGGCCTACCTGGTGGGGCTGTTCGAAGACACGAACCTGTGCGCCATCCATGCCAAGC 370
Query 1 -----------ATGC-------------------CAGACCCGTCC--------------------AAATCGGCT 24
|||| |||.|.|.||| |||||.|||
Sbjct 371 GCGTGACCATCATGCCCAAGGACATCCAGTTGGTCAGCCGCATCCGCGGGGAGAGGGCCTAAGCGAAATCCGCT 444
Query 25 CCTGCGCCCAAGAAGGGTTCTAAAAAGGCTGTCACCAAG-GCACAGAAGAAGGACGGCAAGAAGCGCAAGCGCG 97
|||||.|||||||||||.||.|||||||||||.| .||| |..|||||||||||||||.||||||||||||||.
Sbjct 445 CCTGCTCCCAAGAAGGGCTCCAAAAAGGCTGTTA-AAAGAGTGCAGAAGAAGGACGGCGAGAAGCGCAAGCGCA 517
Query 98 GCCGCAAGGAGAGCTATTCTATCTACGTGTACAAGGTGCTGAAGCAGGTGCACCCCGACACCGGCATCTCGTCC 171
||||||||||||||||.||..|.||||||||..||||||||||||||||.||||||||||||||||||||||||
Sbjct 518 GCCGCAAGGAGAGCTACTCCGTTTACGTGTAGGAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCGTCC 591
Query 172 AAGGCCATGGGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCAGCGAGGCCTCCCGCCTGGC 245
||||||||||||||||||||||||||||||||.||||||||||||||||||||..|.|||||.|||||||||||
Sbjct 592 AAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGAGAGGCGTCCCGCCTGGC 665
Query 246 ACACTACAACAAGCGCTCCACCATCACGTCCCGCGAAGTGCAGACGGCCGTTCGCCTGCTGCTGCCCGGCGAGC 319
.||||||||||||||||||||||||||.|||||.||..|.|||||||||||.||||||||||||||||||.|||
Sbjct 666 GCACTACAACAAGCGCTCCACCATCACATCCCGTGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGCAAGC 739
Query 320 TGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCTGTCACCAAGTACACCAGCTCCAAG--------------- 378
||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.
Sbjct 740 TGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCGGTCACCAAGTACACCAGCTCGAACATTTTCTAGCTGAAG 813
Query 379 -------------------------------------------------------------------------- 378
Sbjct 814 TTACTGTTGTTGTCAACTACTCAGCATCCAAAATTTTCACAAGAAAACAAGGTTTTTTCTCTTCAAATTACAGT 887
Query 379 -------------------------------------------------------------------------- 378
Sbjct 888 CCAAAGAGTGGCAAACAAGAAAGATGACAGAGTCCGAAGACCTTAAGATTTCTTTTCTTTGGTCAAGAACTCAT 961
Query 379 -------------------------------------------------------------------------- 378
Sbjct 962 TACACAATGGATGATACATCTTAGGTGGTCCTACTAAAAAGAGACACAAGAATCTAGAGACTATCTCACTGTCA 1035
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1036 ACCAATCCAAGGAACTTTGCTTTAGATGGCCAAAGCCAGAAACAGCAAAGTAGAAGAACTACTAGAGCTTTAAG 1109
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1110 CAGTTCCTTAGTATTTTTCCTTGGCTTATCCAAGCCTGGATACTGGTCCACTTTCCCAAAGTTGGTAAAGAGGT 1183
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1184 AATACAGCTTGGGATTGATTGGATATTGAGACAGAAAGAGAGGGGGAGAGAGAGATATCTAGGTACTGGAGCAG 1257
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1258 CACTAGGCACTCAGAAGAAGGAACACTTGGAGCAAAAAATGAAGGATATAGATTAGTGAAGTGAAGTCAGGAGC 1331
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1332 AAATGATCTCAGTTGCTTTACATGATCAAAGGACAATAACTGCAAATTGCCAGAGGGTAGGTGAAGCTCCATAT 1405
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1406 CACTTTTTAATATTAGTGTTTTAAACACCTAGGAATAGAATATACCTAAAGATAATAGCTTGATTTCCCCACAC 1479
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1480 CCACCTTTGCAATGTTTTGATTTTGCACAAGTCTTGGTTTCTAGTTTGTGGGATTATCATTTTTCATTGCATTG 1553
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1554 AAGGAAAATTCTTTAGGCCAGGAGGGAGTCTAAGACTTCAGACACAGCACAGATACGATCCTGGGCAAGGGTCA 1627
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1628 TTCAGTGTTCTTAAGAAAATTCTAAATCCTAAGGTGTGATGGTTAATATTAGGTGTCAACTTGATAGGATTAAA 1701
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1702 GGATGCCTAGATAGCTAAGTATTGTTTCTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTAACATTTGAGT 1775
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1776 CAGTGGACCAGGAGAGGAAGACTCACCCTCAATGTGGGTTGGCACCATCCAGTCGGCTGCCAGGGTAGCTACAA 1849
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1850 CAAAGCAGGAGAGAGAAGGTGGGCTAAGCTGGCTTGCAGAGTTCTGGCTTTCATCCCTCTCCTGTGCTGGATGC 1923
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1924 CTCCATCCATTCCTCCTGCCTTTGGACATCAGACTCCAGGTTGTTTGGCCTTTGGACTCTTGGACTTAACACCA 1997
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1998 GTGGCTTGCCTGGGGCTTTTGGGCCTTAGGCCACAGACTGAAGGCTGCACTATGGGCTTCCCTACTCTTGAGGC 2071
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2072 TTTTGGACTCAGACTGAACCACTACTGGCTTCTTTCTTCCTCAGCTTGCAGACGGCCCACCGTAGGACATTGCC 2145
Query 379 ----------------------------------------------- 378
Sbjct 2146 TTGTAATCATGTGAGCCAATTCTCCTTAATAAACTCCTTTTAATATA 2192
