Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04852
- Subject:
- NR_109856.1
- Aligned Length:
- 1637
- Identities:
- 836
- Gaps:
- 801
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGCAACCCCATAAGGTAGCACGCCGTTACCCGTGGGGAGCGTTTCCGCCATTTTTGAAAATTAATTGGGAAGG 74
Query 1 -----------------------------ATGGCAGCCTTTGCAGTGGAACCTCAGGGGCCCGCGTTAGGATCT 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TACTGGTTTTAAGTGTAGTTGCCGACGCAATGGCAGCCTTTGCAGTGGAACCTCAGGGGCCCGCGTTAGGATCT 148
Query 46 GAACCAATGATGCTGGGTTCACCCACATCTCCAAAGCCAGGAGTTAATGCCCAGTTCTTACCTGGATTTTTAAT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAACCAATGATGCTGGGTTCACCCACATCTCCAAAGCCAGGAGTTAATGCCCAGTTCTTACCTGGATTTTTAAT 222
Query 120 GGGGGATTTGCCAGCTCCGGTGACTCCACAACCTCGATCAATTAGTGGCCCTTCAGTAGGAGTAATGGAAATGA 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGGGATTTGCCAGCTCCGGTGACTCCACAACCTCGATCAATTAGTGGCCCTTCAGTAGGAGTAATGGAAATGA 296
Query 194 GATCACCTTTACTTGCAGGTGGGTCACCACCACAACCAGTTGTACCAGCTCATAAAGATAAAAGTGGCGCTCCA 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATCACCTTTACTTGCAGGTGGGTCACCACCACAACCAGTTGTACCAGCTCATAAAGATAAAAGTGGCGCTCCA 370
Query 268 CCAGTTAGAAGTATATATGATGACATTTCTAGCCCAGGACTTGGATCAACACCTTTAACTTCAAGAAGACAGCC 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCAGTTAGAAGTATATATGATGACATTTCTAGCCCAGGACTTGGATCAACACCTTTAACTTCAAGAAGACAGCC 444
Query 342 AAACATTTCAGTAATGCAGAGTCCTCTTGTTGGAGTTACATCTACTCCTGGAACAGGGCAAAGTATGTTTAGTC 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAACATTTCAGTAATGCAGAGTCCTCTTGTTGGAGTTACATCTACTCCTGGAACA------------------- 499
Query 416 CAGCAAGTATCGGTCAGCCACGAAAGACGACATTATCTCCTGCCCAGTTGGATCCTTTTTATACTCAAGGAGAT 489
Sbjct 500 -------------------------------------------------------------------------- 499
Query 490 TCTTTGACTTCAGAAGATCACCTCGATGACTCTTGGGTGACTGTATTTGGGTTTCCTCAAGCATCTGCTTCCTA 563
|||||||||||||||||||||||||
Sbjct 500 -------------------------------------------------GGTTTCCTCAAGCATCTGCTTCCTA 524
Query 564 CATATTACTACAATTTGCACAGTATGGGAATATCTTAAAACATGTGATGTCTAATACAGGAAATTGGATGCATA 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 525 CATATTACTACAATTTGCACAGTATGGGAATATCTTAAAACATGTGATGTCTAATACAGGAAATTGGATGCATA 598
Query 638 TTCGTTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAGATGGGAGGATTTTTGGAGAATCCATCATG 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 TTCGTTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAGATGGGAGGATTTTTGGAGAATCCATCATG 672
Query 712 ATTGGTGTAAAACCATGTATTGACAAAAGTGTTATGGAAAGCAGTGACAGATGTGCTTTATCATCTCCATCTTT 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 673 ATTGGTGTAAAACCATGTATTGACAAAAGTGTTATGGAAAGCAGTGACAGATGTGCTTTATCATCTCCATCTTT 746
Query 786 AGCCTTTACACCACCAATCAAAACTCTAGGTACACCAACACAACCTGGAAGTACTCCTAGGATTTCTACCATGA 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 747 AGCCTTTACACCACCAATCAAAACTCTAGGTACACCAACACAACCTGGAAGTACTCCTAGGATTTCTACCATGA 820
Query 860 GACCTCTTGCTACAGCATACAAAGCCTCTACTAGTGATTATCAGGTTATTTCTGACAGACAAACGCCAAAAAAA 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 821 GACCTCTTGCTACAGCATACAAAGCCTCTACTAGTGATTATCAGGTTATTTCTGACAGACAAACGCCAAAAAAA 894
Query 934 GATGAAAGTCTTGTATCCAAAGCAATGGAGTACATGTTTGGCTGG----------------------------- 978
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 GATGAAAGTCTTGTATCCAAAGCAATGGAGTACATGTTTGGCTGGTAGTAGAACACCAAGAAGGAGGTTGCTAC 968
Query 979 -------------------------------------------------------------------------- 978
Sbjct 969 ACTAAAACAGAGTTAGCAGAGTGCTGCTGGTTCCTTCGGTTAGTTATATAACTGTTCCTGCAGTATTGGATAGC 1042
Query 979 -------------------------------------------------------------------------- 978
Sbjct 1043 TATCTCATACTTCTTTTAGAAAGAAGCCTTTTTCATTAAGGATACAACCTATTTGTAGCTCGCACTTTAAAAGA 1116
Query 979 -------------------------------------------------------------------------- 978
Sbjct 1117 TGCTTGAGATACATTTTAAAGAAAACTAAAAATCCCTGTAAATAGGATTTTGTGCTTTCTGTAACAGTGCATGC 1190
Query 979 -------------------------------------------------------------------------- 978
Sbjct 1191 TTCAGCACAGAAAACTCAGCATTGATTATTGTAAATTAAATAACTGAAATTGTGGTGAGACGTCATAGTCTTCA 1264
Query 979 -------------------------------------------------------------------------- 978
Sbjct 1265 TGAGAACGTGGGGGTGAATTTCATGAAGGGGAACTATAGTTATTTCTACCGACACAAATATTATAATTAGCAAT 1338
Query 979 -------------------------------------------------------------------------- 978
Sbjct 1339 TTGAATTATGGTCTTTTAATTTAGATAGTATTTAATATTTTAATTATCCTTGTTTGTATATGTCCTGTCACAGA 1412
Query 979 -------------------------------------------------------------------------- 978
Sbjct 1413 GTGTCCTCTTGGTGTATTCTAAAACGAGCATTCTTTTAAAAAACCTAAAGTTTCTTGATAATAAACATTGTCAA 1486
Query 979 --------- 978
Sbjct 1487 TGATATGTG 1495
