Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04855
• Subject: XM_017003317.1
• Aligned Length: 1329
• Identities: 884
• Gaps: 426

Alignment

Query    1  ATGGTGCCCAGCTCTCCGCGCGCGCTCTTCCTTCTGCTCCTGATCCTCGCCTGCCCCGAGCCGCGGGCTTCCCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGTGCCCAGCTCTCCGCGCGCGCTCTTCCTTCTGCTCCTGATCCTCGCCTGCCCCGAGCCGCGGGCTTCCCA  74

Query   75  GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCTGAAGGGCCAGGAGACAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCTGAAGGGCCAGGAGACAC  148

Query  149  GCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGTGGGCCCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGTGGGCCCA  222

Query  223  GATGCCCTTCCAGTTTCCTGCCCGGCTCTGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCAAGTACTTAGT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GATGCCCTTCCAGTTTCCTGCCCGGCTCTGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCAAGTACTTAGT  296

Query  297  GGATCACGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGATCACGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCA  370

Query  371  ATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAGTGAATGCTCCAGCCAGCCTTGTCAAAATGGT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAGTGAATGCTCCAGCCAGCCTTGTCAAAATGGT  444

Query  445  GGTACATGTGTAGAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTACATGTGTAGAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCA  518

Query  519  TCAGGCCCAGACT-------------------------------------------------------------  531
            |||||||||||||                                                             
Sbjct  519  TCAGGCCCAGACTGCCGCCCCCGAGGGCAGCGTGGCCGGCGACTCCGCCTTCAGCCGCGCGCCGCGCTGTGCGC  592

Query  532  --------------------------------------------------------------------------  531
                                                                                      
Sbjct  593  AGGTGGAGCGGGCTCAGCACTGCAGCTGCGAGGCCGGATTCCACCTGAGCGGCGCCGCCGGCGACAGCGTCTGC  666

Query  532  ---GACGTGAACGAGTGTGAGCTCTACGGGCAGGAGGGGCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC  602
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGGACGTGAACGAGTGTGAGCTCTACGGGCAGGAGGGGCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC  740

Query  603  CCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGATACCGAACTCTGGCTGACGGGAAGAGCTGTGAGGATGTGG  676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGATACCGAACTCTGGCTGACGGGAAGAGCTGTGAGGATGTGG  814

Query  677  ATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCATCAACACCGGTGGAAGCTTCCAGTGT  750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCATCAACACCGGTGGAAGCTTCCAGTGT  888

Query  751  GTCAGCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGAAGACGTCTCCATTCCAGTGTGAGCGGAA  824
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||   ||||| 
Sbjct  889  GTCAGCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGAAGACGTCTCCATT----TG---GCGGA-  954

Query  825  CCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCCATT-----ACCTCTCTCT  893
                        ||| ||                      |||| .|..|.||||.|||     ||| ||.|  
Sbjct  955  ------------GGA-AG----------------------AAGA-AAAATACTTCTATTTGAGAACC-CTAT--  989

Query  894  GCCTTCCAACCTGAAGACGCCCATCACGCTCTTCCGCATGGCCACAGCCTCTGCCCCCGGCCGAGCTGGGCCCA  967
                       |||.|               ||  |||||                               |||
Sbjct  990  -----------TGAGG---------------TT--GCATG-------------------------------CCA  1004

Query  968  ACAGCCTGCGGTTTGGGATCGTGGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACT  1041
            ||         ||..|||                               |||     ||||||||..|.|.|..
Sbjct 1005  AC---------TTCTGGA-------------------------------GAT-----GTTCAGACAAGAAAAAA  1033

Query 1042  GGGGATCTGA-------TCCTTGTGCAGAACCTGGAGGGGCCTCAGACGCTGGAGGTGGACGTCGACATGTCGG  1108
            .|..||.|||       |||                                                      
Sbjct 1034  AGAAATGTGAAAGAGTTTCC------------------------------------------------------  1053

Query 1109  AATACCTGGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGGTCACCATCTTTGTATCCCCCTATGACTTC  1179
                                                                                   
Sbjct 1054  -----------------------------------------------------------------------  1053