Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04863
- Subject:
- NR_033304.2
- Aligned Length:
- 3660
- Identities:
- 459
- Gaps:
- 3147
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCTCCAGCCGCGCTCGCGCCCTCCTTCTCCTACTGCGCTCCCGGCACGGGCCGCGCGCAGGCGGCGCTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATTGCACACGCGGGGGGCGCCGCAGTGTTCGTGGGATGGGGCAGCGGGCTGCCTCTGGCGGCAGGGACACGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CATCCCGGGTTCAGATTTGAGACTCTAGGAAAGTTCTGTGTCAATTACCAGGTTGTGGCTTTCTGCAGGAGCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTACAAATCCTTGCACCTTGGCTGAGGTGCGGGATGGGAAATGCACAGAATCGTCTTGCATTCTCTCACCACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCACTCGACAGCGCAGAGCCCTGAGTGCCAGTTCTCTTCCACCGTCTCAAGTGCCCACTCTGAGGCCCTCTGT 370
Query 1 ----------------------ATGGAACCTGGCCCTGCTCTGGCCTGGCTCCTGCTCCTGAGCCTGCTGGCGG 52
|||||||||.|||||||.||||||||||||||.||.|||||||||.||||.|
Sbjct 371 ATGAGTGACACGCCAGTCTGCCATGGAACCTAGCCCTGCCCTGGCCTGGCTCCTACTGCTGAGCCTGGTGGCTG 444
Query 53 ATTGTCTGAAAGCTGCTCAGTCCCGAGACTTCACAGTGAAAGACATTATCTACCTCCATCCTTCAACCACACCA 126
||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||.
Sbjct 445 ATTGTCTGAAGGCTGCTCAGTCCCGAGACTTCACAGTGAAAGACATAATCTACCTCCACCCTTCAACCACTCCG 518
Query 127 TATCCTGGTGGATTTAAATGTTTCACCTGTGAAAAGGCAGCAGACAATTATGAGTGCAACCGATGGGCTCCAGA 200
|||||||||||.|||||.||||||||||||||.||.|||||||||||||||||.|||||||||||||||||.||
Sbjct 519 TATCCTGGTGGGTTTAAGTGTTTCACCTGTGAGAAAGCAGCAGACAATTATGAATGCAACCGATGGGCTCCTGA 592
Query 201 CATCTACTGCCCTCGAGAGACCAGATACTGCTACACTCAGCACACAATGGAAGTCACAGGAAACAGTATCTCAG 274
|||||||||.||||||||.||||||||||||||||||||||||||.||||||||||||||.|||||.|||||.|
Sbjct 593 CATCTACTGTCCTCGAGACACCAGATACTGCTACACTCAGCACACGATGGAAGTCACAGGGAACAGCATCTCTG 666
Query 275 TCACCAAACGCTGTGTCCCACTGGAAGAGTGCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAG 348
|||||||||||||||||||.|||||.||||||||||||||.||||||.|||||||.|||||.||||||.|||||
Sbjct 667 TCACCAAACGCTGTGTCCCGCTGGAGGAGTGCTTATCCACAGGCTGCCGAGACTCAGAGCACGAAGGCTACAAG 740
Query 349 GTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGC 422
.|||||||.||.||.||||||||||||||||||||..|.|||||.||.||||||||||||||||||||||||||
Sbjct 741 ATCTGCACCTCCTGCTGTGAAGGAAATATCTGTAATCTACCACTCCCTCGAAATGAAACTGATGCCACATTTGC 814
Query 423 CACGACGTCACCTATAAATCAGACAAATGGGCACCCACGCTGTATGTCAGTGATAGTGTCCTGCTTGTGGTTGT 496
.||.||.|||||||||||.|||||.|||||||||||||.||||.|.||||||||.|||||||||||||||.|||
Sbjct 815 TACCACATCACCTATAAACCAGACGAATGGGCACCCACACTGTGTTTCAGTGATCGTGTCCTGCTTGTGGGTGT 888
Query 497 GGTTAGGGCTCATGTTA--------------------------------------------------------- 513
||.|.||.||||..|||
Sbjct 889 GGCTGGGACTCACCTTATAATAACCCTTTCTCTCTACCAAATGTAGATGAGCTCTGTGGGTTTCCCCATGGCCC 962
Query 514 -------------------------------------------------------------------------- 513
Sbjct 963 ATAGTCATGCATGAAGTCATTGGCTTGGCAGTAGTGACACAACACAATCACAGCAACCCCAGACGTCATCGCAG 1036
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1037 CCACCCATTAATTACCATTAACCATGAAGAACAAGCATTGCTTCCATGCTGTCATTTCCAGCCTAGCTACAACC 1110
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1111 CCATCACAGTCAGCCTGTCCCCCCCAATAGATACAGACCCTGATTTCTATACTACAAACCTGTGATTTCACTCC 1184
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1185 AAGAAAGAGTTCTGCATTTATTAATGTCTGGGGTTCTTGCTTCAGAATCCATGCATGAGCTGCAGGAGGCCCTG 1258
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1259 GACCCTCTGAGGAATAAGCTATGGATGCAGGAGGTATCGTTCTTTTCAGGAAAAGAGTAAAGAACCATTGACTT 1332
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1333 AATTGCAATCACACCTGCACCTATAGCTTTAGAAGTTTAAAACTTTAAATCCAAAATAAATGGAATAGTTTCTT 1406
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1407 TGAGATTATGATGGAGTCCCGGAAAGAGTTGAAAGAACTTTGCTCAATTTAATTTCCCCAGTCTCCTTATCTTA 1480
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1481 ACATTGGGAAATGTGTTCCTTCTGCTCTTTGTAGATGTTTTTTTAAAAAGGCAATTATAAAAGTTTGTTGTATT 1554
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1555 TGTAGGAGTGAAAAGAGAAAGAGTTCCTCCAACTTGATGAAATTAGCATCCACAAGATAATGTTATCCCTTCTT 1628
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1629 ATAACTGGGCAGATTGGCCTTGACTCAGTTGCTAATTATGCTTCCTGAGTGCCAGGATTCCAGCTGGACCAGCA 1702
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1703 GGATTATTTTCTCCAGGTGTTGCATTCTAGTCAGATATAGCTGATGTAGTCAGAGAGAGGACTTCAGAATAAAA 1776
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1777 GGAAGCTTTCTGGAGGTTAGTCCTAGCTCATTTGGAAGGCTCCGAAATGGCTAAGCAAAATTCCTTCTCTTTCC 1850
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1851 ACAGTATTTACTGGCACAGAGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGAGAAAGCTCTGGGTTAACTT 1924
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1925 CTCAGTAGATCAATAAGATAAGAGCACACTTGTGCTAGGGTGAGAAAAAGATAGATTGTAAGTAGTATGGTGGT 1998
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1999 CTAAGGAGTACGTTTTGTTTCTCTCTGCTACTGTTTTTGAAGAAGAAAAGACTTTCATTGTCTTTCATGTATTT 2072
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2073 TTTTAACCTAAAAAATTGTGTTTGTTTTCTTCTCCTATGTAAATTCTTTAAATGACATTTATTTTTGTATGGTA 2146
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2147 TAAACTGAAAACTATATTTCAAAAAGAATTCTTTCTTTTTGTTTTTCTGAACAAAATATCAGTTAGAATGCTTG 2220
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2221 CTTTCAAGAGCGGTAGGGATGCTGACCATGGTAGGATTCCTGACCATGGGAAGTTATCTGTGTTCCTTGTACTG 2294
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2295 ATGCTGAAAATGTTACTGTGCTATGGACAAGAGATGTGCATTTGCCTCAAGGGTTTGACTCATTGTTTTCCCAG 2368
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2369 AAATGTTGCCCAAGAAAGATTCAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTGTC 2442
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2443 CACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGATGTTAAAATATATCTGTCCTGCACAGGGAACT 2516
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2517 TTAGCTTAAATTAGAACCCCGCTCAGGCACCAAATCTGAACCGACGGCAGAAACTCTGATGCAAGTCATTGAAG 2590
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2591 TTTCATCACACAGCCTTAATGAAGAGTTTGGCAGGCTTATCAATTTCTTGCTTATAACTGCGGATGGGAGAGCA 2664
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2665 GGAGAGAAAGACCTGTAATAAGCACCTCTTATGTGCCCAGCACTTTGCTAAGCACTTTACATAGTTAGGCCATA 2738
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2739 TAACCGTACATCAATTCTGTAAGAACAGAACATATTGATGTGTACAAATGAAGATCCCAAGGCTCAAAGAAGTT 2812
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2813 TGATAAATGAAGCCTTTTCCTTCAGATTTAGTTTATGTGGGATGTGACATGTTTGAAAAGAAAGAAAAAAAAAA 2886
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2887 CTGGGGGAGGGGGGCTGGAATTTCTCAGCTAGGAAAACCTCTAGGCCTGACTTCATGGGAATTTCCCCATCTTA 2960
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2961 TCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGTGTCCCCTTGTCACTTTTTCTTTGGGGAATAA 3034
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3035 AGTTATAGCTTCCTTATTTATCCTCTGGTAAAGAGAGGAGATAGTTGATCTTGCATCTAAAGATGCTATAAGAC 3108
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3109 AATTAGAATTTGATGTTGTACATGTCTACAAGTACCGTTTTTATGCATGGTCACATTCTACTGACATTTGCCAA 3182
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3183 GTCTGCATGCAATCTGAACAAGAGACAAGGGACTGACCACACAAGAGCCTCCCTGGCTGGTTTTCAGGGATTGG 3256
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3257 GTTCTCAAAGGTATAGGCTGTCCTCACCTGGGGAGTAGTGCCAGCCACAGTACACATGTGCTGCACACATCCAT 3330
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3331 ACTGCCTTTCAAACTATCTTTTTAATTCTCTTGAAAGAATATGGATTTGCTCACCACCCCCAGCCTCAAGAAGC 3404
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3405 CAAGGAGGGACCATTCCTGTAGAAGGTCCAGGACTAGTTACCCATGTGACTGTTGTCACTTTAAACTTCCCATT 3478
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3479 AAACCTCACCATTGGTGATGGCTTAAAATGCAAAGAGCCATGATGTGTATATTAACCTATGTTCTACATATTTA 3552
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3553 TTTTTAGACTTTCTCCAACATCCATGTTAGTATGGGATTAATGCCTAAATGTAAATATTGTACACTTTGTAAAT 3626
Query 514 ---------------------------------- 513
Sbjct 3627 CAATGAATAAAGATTTTAAGTGTGTTTCATTCGG 3660
