Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04982
Subject:
NM_177791.3
Aligned Length:
2851
Identities:
2409
Gaps:
74

Alignment

Query    1  ATGGAGGAGTCTGGCATGGCT-CATGAATCAGCAGAGGACTTGTTTCATTTCAACGTAGGGGGCTGGCATTTCT  73
            |||||||||.||||| .|||| |||||.|||||||||||.||||||||.|||||.||.||||||||||||||||
Sbjct    1  ATGGAGGAGCCTGGC-GGGCTCCATGAGTCAGCAGAGGATTTGTTTCACTTCAATGTCGGGGGCTGGCATTTCT  73

Query   74  CAGTTCCCAGAAGCAAACTCTCTCAGTTTCCAGACTCCCTGCTGTGGAAAGAGGCTTCAGCCTTGACCTCTTCA  147
            ||||||||||.||||||||..|||||||.||||||||.|||.||||||||||||||||||||.|||||||||||
Sbjct   74  CAGTTCCCAGGAGCAAACTTGCTCAGTTCCCAGACTCGCTGTTGTGGAAAGAGGCTTCAGCCCTGACCTCTTCA  147

Query  148  GAAAGCCAGAGGCTATTTATCGACAGAGATGGTTCCACATTTAGGCACGTGCACTATTACCTCTACACCTCCAA  221
            ||.|.||||.||||.||.||.||||||||.||.|||||.||||||||.||||||||||||||||||||.|||||
Sbjct  148  GAGAACCAGCGGCTCTTCATTGACAGAGACGGCTCCACGTTTAGGCATGTGCACTATTACCTCTACACGTCCAA  221

Query  222  ACTCTCCTTCTCCAGTTGTGCAGAACTGAACTTGCTGTATGAGCAAGCATTGGGTTTGCAGCTGATGCCTTTGC  295
            .|||||||||||||||||||||||||||||||||||.|||||||||||..|||||||||||||||||||.||||
Sbjct  222  GCTCTCCTTCTCCAGTTGTGCAGAACTGAACTTGCTCTATGAGCAAGCCCTGGGTTTGCAGCTGATGCCCTTGC  295

Query  296  TGCAGACTCTAGATAACCTGAAGGAAGGGAAACACCATCTACGCGTACGGCCTGCAGACCTACCTGTTGCTGAG  369
            |.|||||.||||||||||||||||||||||.||||||.||.||.||.||||||||.|||.|.|||||.||||||
Sbjct  296  TTCAGACCCTAGATAACCTGAAGGAAGGGAGACACCACCTCCGTGTGCGGCCTGCCGACATTCCTGTGGCTGAG  369

Query  370  AGAGCATCTCTGAACTACTGGCGTACATGGAAGTGTATTAGCAAACCCTCAGAATTTCCAATTAAAAGCCCAGC  443
            ||||||||.||||||||||||||.||||||||||||||.|||||.|||||.||.||||||||.||||||||.||
Sbjct  370  AGAGCATCCCTGAACTACTGGCGGACATGGAAGTGTATCAGCAAGCCCTCGGATTTTCCAATAAAAAGCCCCGC  443

Query  444  CTTTACAGGCCTACATGATAAGGCACCTCTGGGGCTCATGGACACACCCCTGTTAGACACAGAAGAGGAGGTGC  517
            |||.|||||.||.|||||.|||||.|||.||||.||||||||||||||.|||||.||||||||||||||.||||
Sbjct  444  CTTCACAGGTCTTCATGACAAGGCCCCTTTGGGACTCATGGACACACCGCTGTTGGACACAGAAGAGGAAGTGC  517

Query  518  ACTACTGCTTCCTGCCCCTAGACCTGGTGGCCAAATATCCCAGCCTAGTGACTGAAGACAACCTGCTGTGGCTG  591
            |||||||||||.|.|||||.|||.||||||||||.||.||.|||||||||||.||||||||.||||||||||||
Sbjct  518  ACTACTGCTTCTTACCCCTCGACTTGGTGGCCAAGTACCCAAGCCTAGTGACCGAAGACAATCTGCTGTGGCTG  591

Query  592  GCTGAGACGGTGGCCCTCATCGAGTGCGAGTGCAGCGAGTTCCGCTTCATTGTGAATTTTCTTCGCTCACAGAA  665
            |||||.|||||||||||.|||||||||||.||||||||||||||||||||||||||||||||.||||||||.||
Sbjct  592  GCTGAAACGGTGGCCCTGATCGAGTGCGAATGCAGCGAGTTCCGCTTCATTGTGAATTTTCTACGCTCACACAA  665

Query  666  GATTTTACTACCGGATAATTTCTCCAACATTGATGTATTAGAAGCAGAAGTGGAAATTCTGGAAATCCCTGCAC  739
            ||||||||||||.|||||.|||||||||||.|||||.||||||||||||||.|||||||||||||||||||..|
Sbjct  666  GATTTTACTACCAGATAACTTCTCCAACATAGATGTGTTAGAAGCAGAAGTAGAAATTCTGGAAATCCCTGAGC  739

Query  740  TCACTGAAGCCGTAAGGTGGTACCGGATGAA-------------------------------------------  770
            |.||.|||||.|||.|||.||||||||||||                                           
Sbjct  740  TTACAGAAGCTGTACGGTTGTACCGGATGAATATGGCGTTGCAACCAGCGTTGCCAGGGCCGAAGGGAAGCCAG  813

Query  771  --------------------------CATGGGTGGCTGTTCCCCGACCACCTGTTCTCCCCTGAGCCCCGGGAA  818
                                      |.|||||||||||||||.||||.||||..|.||.||.||.||.||.||
Sbjct  814  CTTAGCCTGGAGCAGGAGGAGCCTAGCCTGGGTGGCTGTTCCCGGACCTCCTGCCCACCTCTAAGTCCTGGAAA  887

Query  819  GGGGGCCCGCACAGCCAGCCTGGAGTCCGTGAAACCGCTCTACACAATGGCCCTGGGTCTGCTGGTCAAGTACC  892
            |||||..||.||||||||..|||||||.||||||||.||.|||...|||||||||||.||||||||||||||.|
Sbjct  888  GGGGGGTCGTACAGCCAGTGTGGAGTCTGTGAAACCACTGTACTTGATGGCCCTGGGCCTGCTGGTCAAGTATC  961

Query  893  CGGACTCTGCGCTGGGCCAGCTTCGCATCGAGAGCACGCTAGACGGAAGCCGACTGTACATCACAGGGAATGGC  966
            |.||||||||.|||||.|||||.|||||||||||||||||.|||||||||.||||.||||||||||||||.||.
Sbjct  962  CAGACTCTGCACTGGGACAGCTGCGCATCGAGAGCACGCTGGACGGAAGCAGACTATACATCACAGGGAACGGG  1035

Query  967  GTCCTCTTTCAGCACGTCAAGAACTGGCTGGGGACTTGCCGGCTGCCCCTGACAGAGACCATTTCCGAGGTATA  1040
            |.|||.||.||||||||||.||||||||||||.|||||.||||||||||||||.||||||||.||||||||.||
Sbjct 1036  GCCCTTTTCCAGCACGTCAGGAACTGGCTGGGCACTTGTCGGCTGCCCCTGACTGAGACCATCTCCGAGGTGTA  1109

Query 1041  TGAGCTCTGTGCCTTCCTAGACAAAAGGGACATCACCTACGAGCCAATCAAAGTTGCTTTGAAGACTCATCTGG  1114
            |||||||||.||||||||.|||||.|||||||||||||||||||||||.|||||.|||.|||||||||||||||
Sbjct 1110  TGAGCTCTGCGCCTTCCTGGACAAGAGGGACATCACCTACGAGCCAATGAAAGTGGCTCTGAAGACTCATCTGG  1183

Query 1115  AGCCAAGGACTTTGGCACCCATGGATGTGCTCA---ATGAGTGGACGGCAGAGATCACTGTGTATTCCCCACAA  1185
            ||||||||||||||...|||.||||||||||||   |.||||||||.||.|||.||||..|.||.||.|||||.
Sbjct 1184  AGCCAAGGACTTTGCTGCCCGTGGATGTGCTCAGTGAGGAGTGGACAGCTGAGGTCACGATATACTCACCACAG  1257

Query 1186  CAGATCATCAAAGTGTATGTTGGAAGCCACTGGTACGCAACCACCCTGCAGACACTGCTGAAGTATCCAGAACT  1259
            |||||||||||..|.||||||||||||||.|||||.|||||.|||||||||||.|||.|||||||.||||||||
Sbjct 1258  CAGATCATCAAGCTTTATGTTGGAAGCCATTGGTATGCAACGACCCTGCAGACCCTGATGAAGTACCCAGAACT  1331

Query 1260  GCTGTCCAACCCTCAGAGAGTGTACTGGATCACATATGGACAAACCCTGCTCATCCACGGGGATGGCCAGATGT  1333
            |||.||||||.||||||||||||||||||||.|.||.|||||.|||.|||||||.||||||||.|||||.||||
Sbjct 1332  GCTATCCAACACTCAGAGAGTGTACTGGATCGCCTACGGACAGACCTTGCTCATTCACGGGGACGGCCAAATGT  1405

Query 1334  TCCGACACATTCTCAACTTCCTGAGACTTGGCAAACTGTTTTTACCATCTGAATTTAAGGAATGGCCCCTCTTC  1407
            |||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||.||||||
Sbjct 1406  TCCGACACATTCTCAACTTCCTGAGACTTGGAAAACTGTTTTTACCATCAGAATTTAAGGAATGGCCTCTCTTC  1479

Query 1408  TGCCAGGAGGTGGAGGAATACCACATTCCATCCCTCTCAGAAGCCCTTGCACAATGTGAAGCATACAAGTCATG  1481
            |||||||||||||||||.||.||.||||||.||||||||||||||||.||||||||.|||||||||||||||||
Sbjct 1480  TGCCAGGAGGTGGAGGAGTATCATATTCCAGCCCTCTCAGAAGCCCTGGCACAATGCGAAGCATACAAGTCATG  1553

Query 1482  GACTCAGGAGAAAGAATCTGAAAATGAAGAAGCTTTTTCCATCAGGAGGCTGCATGTGGTGACAGAAGGGCCAG  1555
            |||||||||||||||||||||||||||||||||||||.||||.||||.|||||||||||||||.||||||.|||
Sbjct 1554  GACTCAGGAGAAAGAATCTGAAAATGAAGAAGCTTTTCCCATTAGGAAGCTGCATGTGGTGACCGAAGGGACAG  1627

Query 1556  GGTCACTGGTGGAGTTCAGTAGAGACACTAAAGAAACCACAGCCTACATGCCTGTGGACTTCGAAGACTGCAGT  1629
            ||.||.|||..||||||||.|||||..|.||.|||||||||||||.||||||||||||||||.|.||.||||||
Sbjct 1628  GGCCAATGGCAGAGTTCAGCAGAGATGCCAAGGAAACCACAGCCTGCATGCCTGTGGACTTCCAGGAATGCAGT  1701

Query 1630  GACAGGACTCCATGGAACAAGGCTAAGGGAAACCTGGTCAGGTCCAACCAGATGGATGAGGCTGAGCAGTACAC  1703
            |||||||||||||||||||||||.||.||.||||||..||||||||.|||||||||.||||||||||||||.||
Sbjct 1702  GACAGGACTCCATGGAACAAGGCCAAAGGGAACCTGACCAGGTCCAGCCAGATGGAAGAGGCTGAGCAGTATAC  1775

Query 1704  TCGGCCCATCCAGGTGTCCCTATGCCGAAATGCCAAGAGGGCTGGCAACCCTAGCACATACTCACACTGCCGTG  1777
            .|||.|.||.|||||.|||||.|||.|||||||||||||||..|||||.||.||||||||||||||||||..||
Sbjct 1776  CCGGACTATTCAGGTCTCCCTCTGCAGAAATGCCAAGAGGGGAGGCAATCCCAGCACATACTCACACTGCTCTG  1849

Query 1778  GCTTGTGTACCAATCCTGGACACTGGGGGAGCCACCCTGAGAGCCCCCCAAAGAAGAAATGCACCACAATCAAC  1851
            |.||.|||.||||.||..||||.|||||..|.|||.|||||||.|||||.||||||||.||||||||.||.|||
Sbjct 1850  GTTTATGTGCCAACCCCAGACATTGGGGAGGTCACTCTGAGAGTCCCCCCAAGAAGAAGTGCACCACTATAAAC  1923

Query 1852  CTCACACAGAAATCTGAAACCAAAGACCCTCCCGCCACTCCCATGCAAAAACTCATCTCCCTGGTGAGAGAATG  1925
            ||||||||||||.||||..|||||||||||||.|.|||.|||||||||||||||||.||..|.||.||.|||||
Sbjct 1924  CTCACACAGAAACCTGATGCCAAAGACCCTCCTGTCACCCCCATGCAAAAACTCATATCTTTAGTCAGGGAATG  1997

Query 1926  GGACATGGTCAATTGCAAACAGTGGGAATTCCAGCCACTGACAGCCACACGGAGCAGCCCCTTGGAGGAGGCCA  1999
            ||||||||||||.||.||||||||||||||||||||||||.|||||.|..||||||||.|..||||||||||.|
Sbjct 1998  GGACATGGTCAACTGTAAACAGTGGGAATTCCAGCCACTGCCAGCCTCCAGGAGCAGCTCTGTGGAGGAGGCTA  2071

Query 2000  CCCTGCAGCTCCCCTTGGGAAGCGAGGCTGCTTCCCAGCCCAGCACCTCAGCTGCCTGGAAAGCCCATTCCACA  2073
            .||||||..||||||.||||||.|||||||||.|.|||||..|.|||||||||||.||||||||.|||||||.|
Sbjct 2072  GCCTGCATGTCCCCTCGGGAAGTGAGGCTGCTCCGCAGCCTGGTACCTCAGCTGCTTGGAAAGCTCATTCCATA  2145

Query 2074  GCCTCAGAGAAGGATCCAGGACCACAGGCAGGGGCTGGAGCTGGAGCGAAAGACAAGGGGCCAGAGCCAACCTT  2147
            .||||.|||||||||.|.||.||.|||.|.||..|.||||||||||.||||||||||||.||||||||||||||
Sbjct 2146  ACCTCTGAGAAGGATGCTGGTCCCCAGACTGGACCCGGAGCTGGAGTGAAAGACAAGGGTCCAGAGCCAACCTT  2219

Query 2148  CAAGCCATACTTACCCCCAAAAAGAGCTGGCACCCTGAAGGACTGGAGCAAGCAGAGGACCAAGGAGAGAGAAA  2221
            .|||||||||||.||..|||||||||||...|||||.|||||||||.|||||||||||.|||||||.|||||||
Sbjct 2220  TAAGCCATACTTCCCTACAAAAAGAGCTATTACCCTAAAGGACTGGGGCAAGCAGAGGCCCAAGGACAGAGAAA  2293

Query 2222  GCCCTGCCCCTGAGCAGCCTCTGCCCGAGGCCAGTGAGGTGGACAGCCTAGGGGTTATCCTCAAAGTGACTCAC  2295
            |||||||.|||||||||||||||||..|.||.|..|.|...||||..|.|||||..||||||||||||.|||||
Sbjct 2294  GCCCTGCTCCTGAGCAGCCTCTGCCTAATGCTAACGGGACCGACAATCCAGGGGCCATCCTCAAAGTGGCTCAC  2367

Query 2296  CCCCCCGTGGTGGGCAGCGATGGCTTCTGCATGTTCTTTGAGGACAGCATCATCTATACCACGGAGATGGACAA  2369
            |||||.||||||||.|..|||||||.|||||||||||||||.||||||||.|||||.|||||..|.|||||.||
Sbjct 2368  CCCCCTGTGGTGGGTAATGATGGCTCCTGCATGTTCTTTGAAGACAGCATTATCTACACCACCCAAATGGATAA  2441

Query 2370  CCTCAGGCACACAACACCCACAGCCAGTCCCCAGCCCCAAGAAGTGACTTTCCTGAGTTTCTCTCTGTCCTGGG  2443
            |.|||.|||.|||.|||.|||||||||.|||||.|..|.||||||||||||.|||||.||||||||||||||||
Sbjct 2442  CATCAAGCATACATCACTCACAGCCAGCCCCCAACTTCGAGAAGTGACTTTTCTGAGCTTCTCTCTGTCCTGGG  2515

Query 2444  AAGAGATGTTTTATGCACAGAAATGTCACTGCTTCCTGGCTGACATCATCATGGATTCCATCAGGCAAAAGGAC  2517
            |.|||||||||||||||||||||||||||.||||||||.|.|||||||||.||||||||||||||||||||||.
Sbjct 2516  AGGAGATGTTTTATGCACAGAAATGTCACCGCTTCCTGACCGACATCATCTTGGATTCCATCAGGCAAAAGGAT  2589

Query 2518  CCCAAAGCCATCACAGCCAAGGTGGTCTCCCTGGCCAATCGGCTGTGGACCCTGCACATCAGCCCCAAGCAGTT  2591
            ||||||||.|||||||||||||||||.||.||||||.|.||.||||||||.|||.|||||||||||||||||||
Sbjct 2590  CCCAAAGCTATCACAGCCAAGGTGGTGTCTCTGGCCTACCGACTGTGGACACTGAACATCAGCCCCAAGCAGTT  2663

Query 2592  TGTGGTAGATTTGCTGGCCATCACCGGCTTCAAGGATGACCGGCACACCCAGGAGCGCCTGTACAGCTGGGTGG  2665
            .|||||.|||.|||||||||||.|.|||||||||||||||||||||||.||||||||.||||||||.|||||.|
Sbjct 2664  CGTGGTGGATCTGCTGGCCATCGCTGGCTTCAAGGATGACCGGCACACTCAGGAGCGTCTGTACAGTTGGGTAG  2737

Query 2666  AGCTTACACTGCCCTTCGCCAGGAAATATGGCCGATGCATGGACCTGCTCATCCAGAGGGGCCTGTCTAGGTCT  2739
            ||||.||||||||.||||||||.|||||||||||.|||.||||||||||||||||||||||.|||||.||||||
Sbjct 2738  AGCTCACACTGCCTTTCGCCAGAAAATATGGCCGTTGCGTGGACCTGCTCATCCAGAGGGGACTGTCCAGGTCT  2811

Query 2740  GTCTCTTACTCCATCCTGGGAAAGTACCTACAAGAGGAC  2778
            ||||||||.||..|||||||.|||||..||||.||||.|
Sbjct 2812  GTCTCTTATTCAGTCCTGGGCAAGTATTTACACGAGGGC  2850

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