Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04996
• Subject: XM_011525603.2
• Aligned Length: 1617
• Identities: 1072
• Gaps: 465

Alignment

Query    1  ATGTCCTGGCCGCGCCGCCTCCTGCTCAGATACCTGTTCCCGGCCCTCCTGCTTCACGGGCTGGGAGAGGGTTC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCCTGGCCGCGCCGCCTCCTGCTCAGATACCTGTTCCCGGCCCTCCTGCTTCACGGGCTGGGAGAGGGTTC  74

Query   75  TGCCCTCCTTCATCCAGACAGCAGGTCTCATCCTAGGTCCTTAGAGAAAAGTGCCTGGAGGGCTTTTAAGGAGT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGCCCTCCTTCATCCAGACAGCAGGTCTCATCCTAGGTCCTTAGAGAAAAGTGCCTGGAGGGCTTTTAAGGAGT  148

Query  149  CACAGTGCCATCACATGCTCAAACATCTCCACAATGGTGCAAGGATCACAGTGCAGATGCCACCTACAATCGAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CACAGTGCCATCACATGCTCAAACATCTCCACAATGGTGCAAGGATCACAGTGCAGATGCCACCTACAATCGAG  222

Query  223  GGCCACTGGGTCTCCACAGGCTGTGAAGTAAGGTCAGGCCCAGAGTTCATCACAAGGTCCTACAGATTCTACCA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGCCACTGGGTCTCCACAGGCTGTGAAGTAAGGTCAGGCCCAGAGTTCATCACAAGGTCCTACAGATTCTACCA  296

Query  297  CAATAACACCTTCAAGGCCTACCAATTTTATTATGGCAGCAACCGGTGCACAAATCCCACTTATACTCTCATCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAATAACACCTTCAAGGCCTACCAATTTTATTATGGCAGCAACCGGTGCACAAATCCCACTTATACTCTCATCA  370

Query  371  TCCGGGGCAAGATCCGCCTCCGCCAGGCCTCCTGGATCATCCGAGGGGGCACGGAAGCCGACTACCAGCTGCAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCGGGGCAAGATCCGCCTCCGCCAGGCCTCCTGGATCATCCGAGGGGGCACGGAAGCCGACTACCAGCTGCAC  444

Query  445  AACGTCCAGGTGATCTGCCACACAGAGGCGGTGGCCGAGAAGCTCGGCCAGCAGGTGAACCGCACATGCCCGGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AACGTCCAGGTGATCTGCCACACAGAGGCGGTGGCCGAGAAGCTCGGCCAGCAGGTGAACCGCACATGCCCGGG  518

Query  519  CTTCCTCGCAGACGGGGGTCCCTGGGTGCAGGACGTGGCCTATGACCTCTGGCGAGAGGAGAACGGCTGTGAGT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTTCCTCGCAGACGGGGGTCCCTGGGTGCAGGACGTGGCCTATGACCTCTGGCGAGAGGAGAACGGCTGTGAGT  592

Query  593  GCACCAAGGCCGTGAACTTTGCCATGCATGAACTTCAGCTCATCCGGGTGGAGAAGCAGTACCTTCACCACAAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GCACCAAGGCCGTGAACTTTGCCATGCATGAACTTCAGCTCATCCGGGTGGAGAAGCAGTACCTTCACCACAAC  666

Query  667  CTCGACCACCTGGTCGAGGAGCTCTTCCTTGGTGACATTCACACTGATGCCACCCAGAGGATGTTCTACCGGCC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTCGACCACCTGGTCGAGGAGCTCTTCCTTGGTGACATTCACACTGATGCCACCCAGAGGATGTTCTACCGGCC  740

Query  741  CTCCAGTTACCAGCCCCCTCTGCAGAATGCCAAGAACCACGACCATGCCTGCATCGCCTGTCGGATCATCTATC  814
            ||||||||||||||||||||||||||||||||||           ||  ||||       .||||  .||| ||
Sbjct  741  CTCCAGTTACCAGCCCCCTCTGCAGAATGCCAAG-----------TG--TGCA-------GCGGA--GTCT-TC  791

Query  815  GG-------TCAGACGAGCACCACCCTCCCATCCTGCCCCCAAAGG-CAGACCTGACCATCGGCCTGCACGGGG  880
            .|       ||||                 |||||.||||   ||| |||..||||..|             ||
Sbjct  792  AGGAAGTTTTCAG-----------------ATCCTTCCCC---AGGACAGCTCTGAGAA-------------GG  832

Query  881  -----AGTGG-GTGAGCCAGCGCTGTGAGGTGCGCCCCGAAGTCCTCTTCCTCACCCGCCACTTCATCTTCCAT  948
                 |.||| .|.|||||..|.|||                  || ||||..|||||                
Sbjct  833  AACAAAATGGACTCAGCCATTGGTGT------------------CT-TTCCAGACCCG----------------  871

Query  949  GACAACAACAACACCTGGGAGGGCCACTACTACCACTACTCAGACCCGGTGTGCAAGCACCCCACCTTCTCCAT  1022
            |.||.||..||.| |||||     ||||                    ||||||                    
Sbjct  872  GGCACCAGAAAGA-CTGGG-----CACT--------------------GTGTGC--------------------  899

Query 1023  CTACGCCCGGGGCC--GCTACAGCCGCGGCGTCC------TCTCGT-----CCAG-GGTCATGGG-----AGGC  1077
            |.||||   |||||  ||.|||||.| |..||||      ||| ||     |||| ||..|..||     ||||
Sbjct  900  CCACGC---GGGCCCAGCCACAGCAG-GTTGTCCGAGCTGTCT-GTGGCCGCCAGCGGAGACAGGAAGAAAGGC  968

Query 1078  ACCGAGTTCGTGTTCAAAGTGAATC--ACATGAAGGTCACC--CCCATGGATGCGGCCACAGCCTCACTGC--T  1145
            ...|||..|||.|||||||   |.|  |||       |.||  |||| ||| |.|||...|.|||| ||.|  |
Sbjct  969  TGGGAGAACGTCTTCAAAG---ACCGTACA-------CGCCTGCCCA-GGA-GAGGCTGGAACCTC-CTCCTTT  1029

Query 1146  CAACGTCTTCAACGGGAATGAGTGCGGGGCCGAGGGCTCC----TGGCAGGTGGGCATCCAGCAGGATGTGACC  1215
            .||| |||||.||                       .|||    |.||.|||  .|||..||            
Sbjct 1030  GAAC-TCTTCTAC-----------------------TTCCCTAATTGCTGGT--CCATAGAG------------  1065

Query 1216  CACACCAATGGCTGCGTGGCCCTGGGCATCAAACTACCTCACACGGAGTACGAGATCTTCAAAATGGAACAGGA  1289
               |||||  ||||                |||.|          .|||        ||  ||||         
Sbjct 1066  ---ACCAA--GCTG----------------AAAAT----------TAGT--------TT--AAAT---------  1089

Query 1290  TGCCCGGGGGCGCTATCTGCTG---TTC-AACGGTCA-GAGGCCCAGCGACGGGTCCAGCCCAGACAGGCCA--  1356
                       ||||..|  ||   ||| |||   || |||.|.||||..|   ||.||   |.|||||.||  
Sbjct 1090  -----------GCTAAAT--TGAGTTTCAAAC---CACGAGCCTCAGCCCC---TCTAG---AAACAGGACACC  1141

Query 1357  ----GAGAAGAGAGCC---ACGTC-----------CTACCAGATGCCCTTGGTCCAGTGTGCCTCCTCTTCGCC  1412
                .|.||.|||..|   |.|||           |||  ||     |||..|.|||          |||.||.
Sbjct 1142  GTGTAAAAATAGAAACTTTAAGTCAACTTGTTTTTCTA--AG-----CTTTATACAG----------CTTTGCT  1198

Query 1413  GAGGG---CAGAGGACCT----CGCAGAAGACAGTGGAAGCAGCCTGTATGGCCGGGCCCCTGGGAGGCACACC  1479
            |.|.|   |||| |.|||    |..|.|||                                            
Sbjct 1199  GTGAGGTCCAGA-GTCCTTTGGCAAATAAG--------------------------------------------  1227

Query 1480  TGGTCCCTGCTGCTGGCTGCACTTGCCTGCCTTGTCCCTCTGCTGCATTGGAACATCCGCAGA  1542
                                                                           
Sbjct 1228  ---------------------------------------------------------------  1227