Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05043
Subject:
NR_037872.1
Aligned Length:
2201
Identities:
657
Gaps:
1466

Alignment

Query    1  ATGGCGCAGACAGTGCCGCCCTGCGAGCTGCCCTGCAAAGAGTACGACGTGGCCCGTAACACGGGCGCCTACAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTCCTCCGGCCTGGCCACCGCCAGCTTCCGCACCTCCAAGTACCTGCTGGAGGAGTGGTTCCAGAACTGCTATG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTCGCTACCACCAGGCCTTCGCCGACCGCGACCAGTCGGAGCGGCAGCGGCACGAGAGCCAGCAGCTGGCCACA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAGACCCAGGCGCTGGCGCAGCGCACGCAGCAAGACTCCACGCGCACAGTGGGCGAGCGACTGCAGGACACGCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGCTGGAAGTCGGAGCTGCAGCGTGAGATGGAGGCGCTGGCTGCGGAGACCAACTTGCTCCTGGCCCAGAAGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AACGGCTGGAGCGCGCCCTGGACGCCACAGAGGTGCCCTTCTCCATCACCACTGACAACCTGCAGTGCCGTGAG  444
                                               |.||||.||||      |..|..||.|.|||||      
Sbjct    1  -----------------------------------CACTTCGCCAT------TTTCCTCCGGAAGTGC------  27

Query  445  CGCCGCGAGCACCCCAACCTCGTGC-GCGACCATGTGGAAACGGAGCTGCTGAAGGAAGCC--GAGCTCATCCG  515
                    |.|.||||       || |||..|.|||        |||||    ||.|.|||  |.|||      
Sbjct   28  --------GGATCCCA-------GCGGCGGTCGTGT--------AGCTG----AGCAGGCCTGGGGCT------  68

Query  516  GAACATTCAGGAGCTGCTGAAGAGAACCATC-ATGCAAGCAGTGAGCCAGATCCGACTGAACCGGGAGCACAAG  588
                          ||.|           || |||                |||  |||               
Sbjct   69  --------------TGGT-----------TCTATG----------------TCC--CTG---------------  84

Query  589  GAGACCTGCGAGATGGACTGGTCAGACAAGATGGAGGCCTACAACATCGACGAGACCTGCGGGCGCCACCACAG  662
                         ||| ||               |.|..|.||        |.|.|||..|||.|...|||   
Sbjct   85  -------------TGG-CT---------------ATGTTTCCA--------GTGTCCTCTGGGTGTTTCCA---  118

Query  663  CCAGAGCACCGAGGTGCAGGCTCATCCGTA-------CTCCACCACCTTCCAAGAGAGCGCCTCCACCCCGGAG  729
              ||||||.|.||          |..||.|       ||.|.||.|          ||||||||||||||.|||
Sbjct  119  --AGAGCAACAAG----------AAACGAATAAATCTCTGCCCCGC----------AGCGCCTCCACCCCAGAG  170

Query  730  ACCCGGGCCAAGTTCACGCAGGACAATCTGTGCCGTGCCCAGCGCGAGCGCCTGGCCTCGGCCAACCTGCGGGT  803
            ||||||.||||||||||.||||||||||||||||..|||||||||||||||||||.|||||||||||||.||||
Sbjct  171  ACCCGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGCCTGGACTCGGCCAACCTGTGGGT  244

Query  804  GCTGGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGCGGCTCCAGTGCGACGCCGTGAACCTGGCCTTCG  877
            |||.||||||||||||||||||||||||||||||||||||.|.||||||||.||||||||||||||||||||||
Sbjct  245  GCTTGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGACTCCAGTGTGACGCCGTGAACCTGGCCTTCG  318

Query  878  GGCGCCGCTGTGAGGAGCTGGAGGACGCGCGGTACAAGCTGCATCACCACCTGCACAAGACACTGCGGGAAATC  951
            ||||||||||||||||.||||||||||.||||.||||||||||.||||||||||||||||..||||||||||||
Sbjct  319  GGCGCCGCTGTGAGGAACTGGAGGACGTGCGGCACAAGCTGCAGCACCACCTGCACAAGATGCTGCGGGAAATC  392

Query  952  ACAGATCAGGAACACAACGTGGCGGCACTGAAGCAGGCCATCAAGGACAAAGAGGCACCTCTGCACGTAGCCCA  1025
            ||||||||||||||||||||||.||||||||||.||||||||||||||||.||||.||||||||||.|||||||
Sbjct  393  ACAGATCAGGAACACAACGTGGTGGCACTGAAGGAGGCCATCAAGGACAAGGAGGAACCTCTGCACATAGCCCA  466

Query 1026  GACCCGGCTGTACCTGCGCTCGCACCGGCCCAACATGGAGCTGTGCCGTGACGCAGCCCAGTTCAG--------  1091
            |||||||||||||||||.|||.|||||||||||||||.||||||||||.||.||||||||||||||        
Sbjct  467  GACCCGGCTGTACCTGCTCTCACACCGGCCCAACATGCAGCTGTGCCGCGAAGCAGCCCAGTTCAGGTACTGCC  540

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct  541  TGGGCCTCTGAGGCAGTCCCAGGTGCCCCCGTCCACCTCCTCGCTGTGACCCTCTCCAATAAACACTCCAATCT  614

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct  615  CCACACACACATCCCCCACAGGTGCTGAGAGGGGAGGGAGAGTTTGCGGCCACACACAACACGCAAGCACGCCT  688

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct  689  TAAACACACAGATATAGACATGACACTGGGCAGGTCATGGGTCGGGGGCCTCCCAGTGCCAGGGACCTGTGCCC  762

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct  763  ACGTGGTCTCACCCCACCCTGTGCTACCTCATCTTCCCGGGAGGAAGCTCCTTCAGACAAGGTGAGCTCCTGGA  836

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct  837  GGCCACGGGGACAGAGAGGCCAGAGAGGGCCATTCCCTGCTGCCTTGAGGGTGCTGTCCCCACCTCTGGTGGAA  910

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct  911  AGTATGACCTACGCCTGGGCTACAGGCATAGATGGGCCGTCCTTTTGTTTCCCTTGTTAACGGATGCCTGGTGG  984

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct  985  CCCCTTCTGAGCCTAAGTACCTTTCTTCCTTCCCTGCCCCTCAGTTCCTTCAAGGAACTGGGTGCCTCCTTCCG  1058

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct 1059  TCAAATATCAGGAATGAAAAGAACTGAGCCTGGTCGGCTGAGGCCAGTCCTGTCCTGTCAGGGTCGAGATTGCA  1132

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct 1133  CGCGGGTCACTCATTCCCACTGAGGCCCGCGCTCCCTGGGAGGACCCTCGTAATTTATGCTCTGCCCTAGAGCC  1206

Query 1092  --------------------------------------------------------------------------  1091
                                                                                      
Sbjct 1207  GCTTTCCTGGTGGGATCCTTTCATGGCGTCTTCCCAGGACCTCCTGCCAGCTCCCATTGGGAGTTTTGGGTCCC  1280

Query 1092  -----------------------------------------------------------------GCTGTTGAG  1100
                                                                             ||||.||||
Sbjct 1281  CTGCACCCCGGTAGGTGCATACTTCTGCCCTCCCCAGCCCCAGCTCACACACCCAACACCCCCAAGCTGGTGAG  1354

Query 1101  TGAGGTGGAGGAGCTGAACATGTCCCTCACAGCACTGCGAGAGAAGCTTCTAGAAGCGGAGCAGTCCCTGCGCA  1174
            |||||||||||||||||||||||||.|||||||.|||.|.||||||||||||||||.||||||||||||..|||
Sbjct 1355  TGAGGTGGAGGAGCTGAACATGTCCATCACAGCGCTGTGGGAGAAGCTTCTAGAAGGGGAGCAGTCCCTTTGCA  1428

Query 1175  ACCTCGAGGACATCCACATGAGCCTGGAGAAGGACATTGCCGCCATGACCAACAGTCTCTTCATCGACCGCCAG  1248
            ||||||||||||||||||||||||||||||||||..||.|||||||||||||||||||||||||||||||||||
Sbjct 1429  ACCTCGAGGACATCCACATGAGCCTGGAGAAGGATGTTACCGCCATGACCAACAGTCTCTTCATCGACCGCCAG  1502

Query 1249  AAGTGCATGGCCCATCGTACTCGCTACCCCACCATCCTGCAGCTGGCTGGCTACCAG-----------------  1305
            |||||||||||||||||||||.|||||.||.||||||||||||||||||||||||||                 
Sbjct 1503  AAGTGCATGGCCCATCGTACTTGCTACACCCCCATCCTGCAGCTGGCTGGCTACCAGTGAGCAGCGGCACGGTG  1576

Query 1306  -------------------------------------------------------  1305
                                                                   
Sbjct 1577  CTTCCCCCCAATCCCCCAAATAAACAGTGCATTAGCTTTCTGCAAAAAAAAAAAA  1631

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