Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05043
- Subject:
- NR_046439.2
- Aligned Length:
- 2783
- Identities:
- 1185
- Gaps:
- 1501
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCACTTCGCCATTTTCCTCCGGAAGTGCGGATCCCAGCGGCGGTCGTGTAGCTGAGCAGCCCTGGGGCTTGGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTATGTCCCTGTGGCTATGTTTCCAGTGTCCTCTGGGTGTTTCCAAGAGCAACAAGAAACGAATAAATCTCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCTCTTGGTTTACTGTGTCACCCAAGCGACTGGGAGCCAGGTCCTGCTCTGGGACTGAGCCGTTGGAGCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGATGACTGCACTGGGCTGACCGCAACAAGCTGACCACACACACTCCTCACTCCCCTGGCCCTGGTGGGCGGC 296
Query 1 -------------------------------------ATGG---CGCAGACAGTGCCGCCCTGCGAGCTGCCCT 34
.||| |.|||||||||||.||||.|||||||||||
Sbjct 297 AGACACCATGGTGCAGACGGATGTGCTCCTACCAGAGCTGGCCCCACAGACAGTGCCACCCTACGAGCTGCCCT 370
Query 35 GCAAAGAGTACGACGTGGCCCGTAACACGGGCGCCTACACGTCCTCCGGCCTGGCCACCGCCAGCTTCCGCACC 108
||||||||||.|||||||||.|.|||||||||||||||||||||||||||||||||||||
Sbjct 371 GCAAAGAGTATGACGTGGCCAGAAACACGGGCGCCTACACGTCCTCCGGCCTGGCCACCG-------------- 430
Query 109 TCCAAGTACCT-GCTGGAGGAGTGGTTCCAGAACTGCTATGCTCGCTACCACCAGGCCTTCGCCGACCGCGACC 181
|| ||||||||.|||||||||||||||||||||||||||||.|||||||||||||.||.||.|||
Sbjct 431 ---------CTGGCTGGAGGTGTGGTTCCAGAACTGCTATGCTCGCTACCGCCAGGCCTTCGCCAACTGCAACC 495
Query 182 AGTC------GGAGCGGCAGCGGCACGAGAGCCAGCAGCTGGCCACAGAGACCCAGGCGCTGGCGCAGCGCACG 249
|||| |||||.||||.|||||||||||||||||||||||.|||||||||||||.|||||.||||..||.
Sbjct 496 AGTCAGAGCGGGAGCTGCAGGGGCACGAGAGCCAGCAGCTGGCCGCAGAGACCCAGGCACTGGCACAGCCGACA 569
Query 250 CAGCAAGACTCCACGCGCACAGTGGGCGAGCGACTGCAGGACACGCACAGCTGGAAGTCGGAGCTGCAGCGTGA 323
|||||||||||||||.|||..||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 570 CAGCAAGACTCCACGTGCAGGGTGGGCGAGCGACTGCAGGACACGAACAGCTGGAAGTCGGAGCTGCAGCGTGA 643
Query 324 GATGGAGGCGCTGGCTGCGGAGACCAACTTGCTCCTGGCCCAGAAGCAACGGCTGGAGCGCGCCCTGGACGCCA 397
|.|||||||.|||||||||||||||.||.||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 644 GGTGGAGGCACTGGCTGCGGAGACCGACCTGCTGCTGGCCCAGAAGCAACGGCTGGAGCGCGCCCTGGATGCCA 717
Query 398 CAGAGGTGCCCTTCTCCATCACCACTGACAACCTGCAGTGCCGTGAGCGCCGCGAGCACCCCAACCTCGTGCGC 471
..||||||||||||||||||||||||||||||.||||||||.|..||||||.|.|||||.|||||||..||||.
Sbjct 718 TGGAGGTGCCCTTCTCCATCACCACTGACAACATGCAGTGCAGCCAGCGCCACCAGCACACCAACCTTTTGCGT 791
Query 472 GACCATGTGGAAACGGAGCTGCTGA------------------------------------------------- 496
|||||||||||.||.||||||||||
Sbjct 792 GACCATGTGGAGACAGAGCTGCTGAAGGCCTATCCCCCTGCACCCTCTCAGTGCCTCAAGAACTGCTGCAGCTC 865
Query 497 -------------------------------------------------------------------------- 496
Sbjct 866 CCGCAAACCCTCTGCCTGCAACAAGGGTGCCTGCGAAGTGATGGAGACACTGACAGTGCAGGAAGAGGAAAACC 939
Query 497 -------------------------------------------------------------------------- 496
Sbjct 940 CAGGGACAGAGGGGTGCAGGACTCGGGCTCTGGCACACAAGGAGGTGTTGACCAAGGCCTGCAGCAGCTGGGCC 1013
Query 497 -----------------------------------------------------AGGAAGCCGAGCTCATCCGGA 517
|||||||.|||||||||||||
Sbjct 1014 TCCTGGGATCCTCACCAAGGACCGGCTCTGGTGCTCAGGGCGTCTCCTCCCTCAGGAAGCTGAGCTCATCCGGA 1087
Query 518 ACATTCAGGAGCTGCTGAAGAGAACCATCATGCAAGCAGTGAGCCAGAT------------------------- 566
|||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1088 ACATTCAGGAGCTGCTGAAGAGAGCCATCATGCAAGCAGTGAGCCAGATCTGGTGGGTCGAGGGCTGCCCAAGG 1161
Query 567 -------------------------------------------------------------------------- 566
Sbjct 1162 GATGACTCCTGACCCCACCCACGGCTGGTCCTGGGGCAAGGCATTGAACGACAGGACCCTGAAGCTCAGAGCCG 1235
Query 567 -------------------------------------------------------------------------- 566
Sbjct 1236 GCAGGGGCTGTCCCAGGTCACAGTGGGAGCACAGGGCTGGGTGGGGGAGGTTCCGGACCAGCCTGAGTTTGAGT 1309
Query 567 -------------------------------------------------------------------------- 566
Sbjct 1310 GGCCAAAGCCCAGTGCCACAACTGCTCTGCAGCCTCCCAGCATGGGCGGCAGCTCTTGGTCACTGCTGAGCACG 1383
Query 567 -------------------------------------------------------------------------- 566
Sbjct 1384 AGGACAGCCGGCCCAGAGCTCCCTCCTGAAGCGGGCATGAAGTCCTAGCCTGCAGCATGGAGGGTCCCCAGCGG 1457
Query 567 -------------------------------------------CCGACTGAACCGGGAGCACAAGGAGACCTGC 597
|.||||||||.|.|||||||.|||||.||||
Sbjct 1458 GGCCCTCCCTGGCCACACACCAAGGCCCTGCCCCACCCCGCCCCAGACTGAACTGAGAGCACATGGAGATCTGC 1531
Query 598 GAGATGGACTGGTCAGACAAGATGGAGGCCTACAACATCGACGAGACCTGCGGGCGCCACCACAGCCAGAGCAC 671
||||||||||||||.||||||.||||||||||||||.|||||.||||.||||||||||||||||||||||||||
Sbjct 1532 GAGATGGACTGGTCGGACAAGGTGGAGGCCTACAACCTCGACAAGACTTGCGGGCGCCACCACAGCCAGAGCAC 1605
Query 672 CGAGGTGCAGGCTCATCC-GTACTCCACCACCTTCCAAGAG--------------------------------- 711
|||||||||||||||||| |.||||||||||||||||||||
Sbjct 1606 CGAGGTGCAGGCTCATCCGGCACTCCACCACCTTCCAAGAGAGGGGGGCCCCAGCTCTGCCCCGTGCTTGCCCT 1679
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1680 GGCTGTGGTCTCGCCTCCCTCTGCCTGGGGGCCCCAGCGGCACTGCTTCCCCCAGCCTGGCCCAGAGGCCCTCG 1753
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1754 CCCCCGAGGGCACTTGGGCAACTGTCTGCCCCTGGCATGAGAAAGCATGCAAGACCTCCTCAAGTGCCCAGCGC 1827
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1828 GTGCACAGCCTGGTTGCCCGTAGACAGGACAGGGTGGGGTGCGGTCAGCCCCAGGCACCGGCAGGATTGCATTT 1901
Query 712 ------------------------------------------------------------------AGCGCCTC 719
||||||||
Sbjct 1902 CCACCCAAGGCCAGCAGAGGGAGCACGAACACCGCCCACTTGAGCATAGCAAACTCCTGGCCCCGCAGCGCCTC 1975
Query 720 CACCCCGGAGACCCGGGCCAAGTTCACGCAGGACAATCTGTGCCGTGCCCAGCGCGAGCGCCTGGCCTCGGCCA 793
||||||.|||||||||.||||||||||.||||||||||||||||..|||||||||||||||||||.||||||||
Sbjct 1976 CACCCCAGAGACCCGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGCCTGGACTCGGCCA 2049
Query 794 ACCTGCGGGTGCTGGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGCGGCTCCAGTGCGACGCCGTGAAC 867
|||||.||||||||||||||||||||||||||||||||||||||||||||.|.||||||||.||||||||||||
Sbjct 2050 ACCTGTGGGTGCTGGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGACTCCAGTGTGACGCCGTGAAC 2123
Query 868 CTGGCCTTCGGGCGCCGCTGTGAGGAGCTGGAGGACGCGCGGTACAAGCTGCATCACCACCTGCACAAGACACT 941
||||||||||||||||||||||||||.|||||||||||||||.||||||||||.||||||||||||||||..||
Sbjct 2124 CTGGCCTTCGGGCGCCGCTGTGAGGAACTGGAGGACGCGCGGCACAAGCTGCAGCACCACCTGCACAAGATGCT 2197
Query 942 GCGGGAAATCACAGATCAGGAACACAACGTGGCGGCACTGAAGCAGGCCATCAAGGACAAAGAGGCACCTCTGC 1015
||||||||||||||||||||||||||||||||.||||||||||.||||||||||||||||.||||.||||||||
Sbjct 2198 GCGGGAAATCACAGATCAGGAACACAACGTGGTGGCACTGAAGGAGGCCATCAAGGACAAGGAGGAACCTCTGC 2271
Query 1016 ACGTAGCCCAGACCCGGCTGTACCTGCGCTCGCACCGGCCCAACATGGAGCTGTGCCGTGACGCAGCCCAGTTC 1089
||.|||||||||||||||||||.||||.|||.|||||||||||||||.||||||||||.||.||||||||||||
Sbjct 2272 ACATAGCCCAGACCCGGCTGTAGCTGCTCTCACACCGGCCCAACATGCAGCTGTGCCGCGATGCAGCCCAGTTC 2345
Query 1090 AG-----------------------------GCTGTTGAGTGAGGTGGAGGAGCTGAACATGTCCCTCACAGCA 1134
|| ||||.||||||||||||||||||||.|||.||||.|||||||.
Sbjct 2346 AGCCCCAGCTCACACCCCCCAACACCCCCAAGCTGGTGAGTGAGGTGGAGGAGCTGTACAAGTCCATCACAGCG 2419
Query 1135 CTGCGAGAGAAGCTTCTAGAAGCGGAGCAGTCCCTGCGCAACCTCGAGGACATCCACATGAGCCTGGAGAAGGA 1208
|||||.||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 2420 CTGCGGGAGAAGCTTCTACAAGCGGAGCAGTCCCTGCGCAACCTCAAGGACATCCACATGAGCCTGGAGAAGGA 2493
Query 1209 CATTGCCGCCATGACCAACAGTCTCTTCATCGACCGCCAGAAGTGCATGGCCCATCGTACTCGCTACCCCACCA 1282
|.|..|||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 2494 CGTCACCGCCATGACCAACAGTGTCTTCATCGACCGCCAGAAGTGCATGGCCCATCGTACTTGCTACCCCACCA 2567
Query 1283 TCCTGCAGCTGGCTGGCTACCAG--------------------------------------------------- 1305
|.|||||||||||||||||||||
Sbjct 2568 TTCTGCAGCTGGCTGGCTACCAGTGAGCAGCGGCACGGTGCTTCCCCCCAATCCCCCAAATAAACAGTGCGTTA 2641
Query 1306 -------------------------------------------------------------------------- 1305
Sbjct 2642 GCTTTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2715
Query 1306 --------------------------------------------- 1305
Sbjct 2716 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2760
