Nucleotide Global Alignment

Description

• Query: ccsbBroad304_05088
• Subject: NM_001321766.1
• Aligned Length: 1502
• Identities: 978
• Gaps: 520

Alignment

Query    1  ATGCTGCAGTGTAGACCCGCACAGGAGTTCAGCTTCGGGCCCCGGGCCTTGAAGGACGCTCTGGTCTCCACTGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGCAGTGTAGACCCGCACAGGAGTTCAGCTTCGGGCCCCGGGCCTTGAAGGACGCTCTGGTCTCCACTGA  74

Query   75  CGCAGCCCTGCAGCAGCTGTATGTGTCCGCCTTCTCCCCTGCCGAGCGGCTCTTCCTGGCCGAGGCCTACAACC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGCAGCCCTGCAGCAGCTGTATGTGTCCGCCTTCTCCCCTGCCGAGCGGCTCTTCCTGGCCGAGGCCTACAACC  148

Query  149  CGCAGAGGACGCTCTTCTGCACCCTGCTCATCCGCACGGGCTTCGACTGGCTCCTGAGCCGACCCGAGGCTCCC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CGCAGAGGACGCTCTTCTGCACCCTGCTCATCCGCACGGGCTTCGACTGGCTCCTGAGCCGACCCGAGGCTCCC  222

Query  223  GAGGACTTCCAGACCTTCCACGCCTCCCTGCAGCACCGGAAGCCCCGCCTGGCTCGGAAGCACATCTACCTACA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGGACTTCCAGACCTTCCACGCCTCCCTGCAGCACCGGAAGCCCCGCCTGGCTCGGAAGCACATCTACCTACA  296

Query  297  GCCGATAGACCTGAGCGAGGAGCCGGTGGGAAGCTCCCTGCTGCACCAGCTGTGCAGCTGCACAGAGGCCTTCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCGATAGACCTGAGCGAGGAGCCGGTGGGAAGCTCCCTGCTGCACCAGCTGTGCAGCTGCACAGAGGCCTTCT  370

Query  371  TCCTGGGCCTGCGCGTCAAGTGCCTGCCGTCGGTGGCAGCCGCGTCCATCCGCTGCTCCTCGCGGCCCAGCCGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCTGGGCCTGCGCGTCAAGTGCCTGCCGTCGGTGGCAGCCGCGTCCATCCGCTGCTCCTCGCGGCCCAGCCGG  444

Query  445  GACTCTGACAGGCTCCAGCTCCACACAGACGGCATCCTGTCCTTCTTGAAGAACAACAAGCCAGGGGACGCGCT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACTCTGACAGGCTCCAGCTCCACACAGACGGCATCCTGTCCTTCTTGAAGAACAACAAGCCAGGGGACGCGCT  518

Query  519  GTGTGTGCTGGGCCTCACACTGTCTGACCTGTACCCCCATGAGGCCTGGAGCTTCACCTTCAGCAAGTTCCTTC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTGTGTGCTGGGCCTCACACTGTCTGACCTGTACCCCCATGAGGCCTGGAGCTTCACCTTCAGCAAGTTCCTTC  592

Query  593  CAGGGCACGAAGTGGGCGTCTGCAGCTTCGCCCGGTTCTCAGGGGAATTCCCGAAGTCGGGGCCCAGCGCCCCT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAGGGCACGAAGTGGGCGTCTGCAGCTTCGCCCGGTTCTCAGGGGAATTCCCGAAGTCGGGGCCCAGCGCCCCT  666

Query  667  GATCTGGCCCTGGTAGAGGCAGCAGCAGACGGCCCCGAGGCCCCCCTGCAGGACAGGGGCTGGGCCCTGTGCTT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GATCTGGCCCTGGTAGAGGCAGCAGCAGACGGCCCCGAGGCCCCCCTGCAGGACAGGGGCTGGGCCCTGTGCTT  740

Query  741  CAGTGCCCTGGGGATGGTTCAGTGCTGCAAGGTCACGTGCCACGAGCTCTGCCACCTTCTGGGCCTGGGGAACT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAGTGCCCTGGGGATGGTTCAGTGCTGCAAGGTCACGTGCCACGAGCTCTGCCACCTTCTGGGCCTGGGGAACT  814

Query  815  GCCGCTGGCTCCGCTGCCTCATGCAGGGTGCGCTCAGCCTGGACGAGGCCCTGCGGCGGCCCCTGGACCTCTGT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCCGCTGGCTCCGCTGCCTCATGCAGGGTGCGCTCAGCCTGGACGAGGCCCTGCGGCGGCCCCTGGACCTCTGT  888

Query  889  CCCATCTGCCTGAGGAAGCTGCAGCATGTCCTGGGTTTCAGGCTCATCGAGAGGTACCA---GAGACTCTACAC  959
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||         
Sbjct  889  CCCATCTGCCTGAGGAAGCTGCAGCATGTCCTGGGTTTCAGGCTCATCGAGAGGTACCAGGTGAG---------  953

Query  960  CTGG----ACTCAGGCGGTGGTGGGGACGTGGC-CCAGCCAGGAGGCGGGGGAGCCGTCAGTGTGGGAGGACAC  1028
            ||||    ||.||               ||.|| .||||||                 ||| .|||||  ||  
Sbjct  954  CTGGGTGAACCCA---------------GTAGCTTCAGCCA-----------------CAG-CTGGGA--AC--  990

Query 1029  CCCGCCTGCCAGCGCCGACTCGGGCATGTGCTGTGAGAGTGACTCGGAGCCCGGCACCAGTGTGTCGGAGCCCC  1102
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1103  TCACCCCTGATGCCGGGAGTCACACCTTCGCCTCAGGGCCAGAGGAAGGGCTGAGCTACCTGGCAGCCTCAGAG  1176
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1177  GCTCCGCTGCCACCTGGGGGCCCTGCGGAGGCCATCAAGGAGCATGAACGGTGGCTGGCCATGTGCATCCAGGC  1250
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1251  CCTGCAGCGGGAAGTGGCAGAGGAGGACCTGGTGCAGGTGGACAGAGCCGTGGACGCCCTCGACCGCTGGGAGA  1324
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1325  TGTTCACGGGCCAGCTCCCGGCCACCAGGCAGGACCCACCCAGCAGCAGGGACAGCGTGGGGCTGCGCAAGGTG  1398
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1399  CTGGGGGACAAGTTCTCCTCCCTGAGGAGGAAGCTGAGTGCCCGAAAACTCGCCAGAGCAGAGTCGGCCCCCCG  1472
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1473  TCCCTGGGATGGGGAAGAGAGT  1494
                                  
Sbjct  991  ----------------------  990