Nucleotide Global Alignment

Description

• Query: ccsbBroad304_05088
• Subject: XM_017011775.2
• Aligned Length: 1516
• Identities: 819
• Gaps: 644

Alignment

Query    1  ATGCTGCAGTGTAGACCCGCACAGGAGTTCAGCTTCGGGCCCCGGGCCTTGAAGGACGCTCTGGTCTCCACTGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGCAGTGTAGACCCGCACAGGAGTTCAGCTTCGGGCCCCGGGCCTTGAAGGACGCTCTGGTCTCCACTGA  74

Query   75  CGCAGCCCTGCAGCAGCTGTATGTGTCCGCCTTCTCCCCTGCCGAGCGGCTCTTCCTGGCCGAGGCCTACAACC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGCAGCCCTGCAGCAGCTGTATGTGTCCGCCTTCTCCCCTGCCGAGCGGCTCTTCCTGGCCGAGGCCTACAACC  148

Query  149  CGCAGAGGACGCTCTTCTGCACCCTGCTCATCCGCACGGGCTTCGACTGGCTCCTGAGCCGACCCGAGGCTCCC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CGCAGAGGACGCTCTTCTGCACCCTGCTCATCCGCACGGGCTTCGACTGGCTCCTGAGCCGACCCGAGGCTCCC  222

Query  223  GAGGACTTCCAGACCTTCCACGCCTCCCTGCAGCACCGGAAGCCCCGCCTGGCTCGGAAGCACATCTACCTACA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGGACTTCCAGACCTTCCACGCCTCCCTGCAGCACCGGAAGCCCCGCCTGGCTCGGAAGCACATCTACCTACA  296

Query  297  GCCGATAGACCTGAGCGAGGAGCCGGTGGGAAGCTCCCTGCTGCACCAGCTGTGCAGCTGCACAGAGGCCTTCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCGATAGACCTGAGCGAGGAGCCGGTGGGAAGCTCCCTGCTGCACCAGCTGTGCAGCTGCACAGAGGCCTTCT  370

Query  371  TCCTGGGCCTGCGCGTCAAGTGCCTGCCGTCGGTGGCAGCCGCGTCCATCCGCTGCTCCTCGCGGCCCAGCCGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCTGGGCCTGCGCGTCAAGTGCCTGCCGTCGGTGGCAGCCGCGTCCATCCGCTGCTCCTCGCGGCCCAGCCGG  444

Query  445  GACTCTGACAGGCTCCAGCTCCACACAGACGGCATCCTGTCCTTCTTGAAGAACAACAAGCCAGGGGACGCGCT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACTCTGACAGGCTCCAGCTCCACACAGACGGCATCCTGTCCTTCTTGAAGAACAACAAGCCAGGGGACGCGCT  518

Query  519  GTGTGTGCTGGGCCTCACACTGTCTGACCTGTACCCCCATGAGGCCTGGAGCTTCACCTTCAGCAAGTTCCTTC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTGTGTGCTGGGCCTCACACTGTCTGACCTGTACCCCCATGAGGCCTGGAGCTTCACCTTCAGCAAGTTCCTTC  592

Query  593  CAGGGCACGAAGTGGGCGTCTGCAGCTTCGCCCGGTTCTCAGGGGAATTCCCGAAGTCGGGG-CCCAGCGCCCC  665
            |||||||||  |||                                        ||.||||| ||||||     
Sbjct  593  CAGGGCACG--GTG----------------------------------------AGCCGGGGCCCCAGC-----  619

Query  666  TGATCTGGCCCTGGTAGAGGCAGCAGCAG--ACGGCCCCGAGGCCCCC----CTGCAGGACAGGGGCTGGGCCC  733
              |.|||..|.|||  |.||.|||  |.|  |.||..|.|.||||.||    |||||||.||         |||
Sbjct  620  --AGCTGTGCGTGG--GGGGTAGC--CTGGCATGGGGCTGTGGCCTCCGTGGCTGCAGGGCA---------CCC  678

Query  734  TGTGCTTCAGTGCCCTGGGGATGGTTCAGTGCTGCAAGGTCACGTGCCACGAGCTCTGCCACCTTCTGGGCCTG  807
            |   |||              ||.||  .||||.||||                     ||||.|     ||||
Sbjct  679  T---CTT--------------TGCTT--TTGCTTCAAG---------------------CACCCT-----CCTG  707

Query  808  G-GGAA--------CTGCCGCTGGCTCCGCTGCCTCATGCAGGGTGCGCTCAGCCTGGACGAGGCCCTGCGGCG  872
            | ||||        |||                    ||||.||        |..|.||.| |.||||.|  |.
Sbjct  708  GTGGAAGTCAACACCTG--------------------TGCATGG--------GAATAGATG-GCCCCTTC--CA  750

Query  873  GCCCCTGGACCTCTGTCCCATCTGCCTGAGGAAGCTGCAGCATGTCCTGGGTTTCAGGCTCATCGAGAGGTACC  946
            ||.|||                  ||||||||         |||.|.|.||     ||||..||          
Sbjct  751  GCTCCT------------------CCTGAGGA---------ATGGCATAGG-----GGCTGTTC----------  782

Query  947  AGAGACTCTACACCTGGACTCAGGCGGTGGTGGGGACG--TGGCCCAG---CCAGGAGGCGGGGGAGCCGTCAG  1015
                              |||| ||.||||      ||  ||.|||||   |||             .|.||| 
Sbjct  783  ------------------CTCA-GCTGTGG------CGTCTGCCCCAGGGCCCA-------------ACTTCA-  817

Query 1016  TGTGGG-AGGACACCCCGCCTGCCAGCGCCGACTCGGGCATGTGCTGTGAGAGTGACTCGGAGCCCGGCACCAG  1088
            |||||| ||||||  ..||||.||||    ||||  ||.||||             ||..|.|||         
Sbjct  818  TGTGGGCAGGACA--GGGCCTCCCAG----GACT--GGTATGT-------------CTTTGGGCC---------  861

Query 1089  TGTGTCGGAGCCCCTCACCCCTGATGCCGGGAGTCACACCTTCGCCTCAGGGCCAGAGGAAGGGCTGAGCTACC  1162
                                   |||.|        ||.||| ||.|.||.||..|||| .|||.|        
Sbjct  862  -----------------------ATGGC--------CAGCTT-GCATGAGAGCATGAGG-TGGGTT--------  894

Query 1163  TGGCAGCCTCAGAGGCTCCGCTGCCACCTGGGGGCCCTGCGGAGGCCATCAAGGAGCATGAACGGTGGCTGGCC  1236
                                                                                      
Sbjct  895  --------------------------------------------------------------------------  894

Query 1237  ATGTGCATCCAGGCCCTGCAGCGGGAAGTGGCAGAGGAGGACCTGGTGCAGGTGGACAGAGCCGTGGACGCCCT  1310
                                                                                      
Sbjct  895  --------------------------------------------------------------------------  894

Query 1311  CGACCGCTGGGAGATGTTCACGGGCCAGCTCCCGGCCACCAGGCAGGACCCACCCAGCAGCAGGGACAGCGTGG  1384
                                                                                      
Sbjct  895  --------------------------------------------------------------------------  894

Query 1385  GGCTGCGCAAGGTGCTGGGGGACAAGTTCTCCTCCCTGAGGAGGAAGCTGAGTGCCCGAAAACTCGCCAGAGCA  1458
                                                                                      
Sbjct  895  --------------------------------------------------------------------------  894

Query 1459  GAGTCGGCCCCCCGTCCCTGGGATGGGGAAGAGAGT  1494
                                                
Sbjct  895  ------------------------------------  894