Nucleotide Global Alignment

Description

• Query: ccsbBroad304_05188
• Subject: NM_001310521.1
• Aligned Length: 916
• Identities: 500
• Gaps: 341

Alignment

Query   1  ATGGACTTCATCAGCATTCAGCAGTTGGTAAGTGGAGAAAGAGTTGAAGGGAAAGTGTTGGGATTTGGACATGG  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  AGTTCCTGACCCTGGAGCCTGGCCTAGTGACTGGAGGAGGGGCCCCCAAGAGGCTGTGGCCCGGGAGAAGCTGA  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  AATTGGAAGAAGAGAAGAAGAAGAAACTTGAAAGATTTAACAGTACCAGATTTAATCTGGATAACCTGGCTGAC  222
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 223  TTGGAAAACTTGGTTCAAAGACGGAAAAAGCGACTGAGACACAGAGTCCCCCCCAGGAAACCTGAGCCCCTGGT  296
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 297  TAAGCCGCAGTCCCAGGCCCAGGTGGAGCCTGTGGGCCTGGAGATGTTCCTGAAGGCAGCTGCTGAGAACCAGG  370
                                                      |||||||||||||||||||||||||||||||
Sbjct   1  -------------------------------------------ATGTTCCTGAAGGCAGCTGCTGAGAACCAGG  31

Query 371  AGTACCTGATTGACAAGTACTTGACAGACGGAGGGGACCCCAATGCCCATGACAAGCTCCACCGCACCGCCTTG  444
           ||..||||||||||||||||.||.|.|||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  32  AGGCCCTGATTGACAAGTACCTGGCGGACGGAGGGGACCCCAATGCCCATGACAAGCTCCACCGCACAGCCTTG  105

Query 445  CACTGGGCCTGTCTGAAGGGTCACAGCCAGCTGGTGAACAAGCTGCTGGTGGCAGGTGCCACAGTGGACGCGCG  518
           ||||||||||||||||||||.|||||.||||||||||||||||||||||.||||||.||..|..|.||.|..||
Sbjct 106  CACTGGGCCTGTCTGAAGGGCCACAGACAGCTGGTGAACAAGCTGCTGGCGGCAGGAGCTGCTATAGAAGTACG  179

Query 519  AGACTTGCTGGACAGGACACCTGTGTTCTGGGCCTGCCGCGGAGGACATCTGGTCATCCTCAAACAGCTGCTTA  592
           .||.||||||||||||||.||.||||||||||||||||||||||||||.||||.|||.|||||||.||||||||
Sbjct 180  GGATTTGCTGGACAGGACGCCCGTGTTCTGGGCCTGCCGCGGAGGACACCTGGACATTCTCAAACGGCTGCTTA  253

Query 593  ACCAGGGAGCCCGGGTCAATGCCCGGGACAAGATCGGGAGCACCCCCCTGCACGTGGCAGTGCGCACCCGGCAC  666
           ||||||||||.|.||||||.||.|..|||||||||.||||||||||.||.||.|||||||||||||...|.|||
Sbjct 254  ACCAGGGAGCTCAGGTCAACGCACAAGACAAGATCTGGAGCACCCCTCTCCATGTGGCAGTGCGCATGGGCCAC  327

Query 667  CCCGACTGCCTGGAGCACCTCATCGAGTGTGGCGCCCACCTGAACGCACAGGATAAGGAAGGGGACACGGCTCT  740
           .||||||||||.||||||||.||||||||||||||||||.|.||||||||||||||||||||||||||.||.||
Sbjct 328  TCCGACTGCCTAGAGCACCTTATCGAGTGTGGCGCCCACATCAACGCACAGGATAAGGAAGGGGACACAGCACT  401

Query 741  GCACGAGGCCGTGCGGCA-CGGCAGCTACAAAGCCATGAAGCTACTGCTGCTCTATGGGGCCGAGCTGGGGGTG  813
           .||||||||||||||..| .|||| |.|||||||.|.|||.||.||||||||||||||.|||.|||||||.|||
Sbjct 402  CCACGAGGCCGTGCGCTATGGGCA-CCACAAAGCAACGAAACTGCTGCTGCTCTATGGAGCCAAGCTGGGTGTG  474

Query 814  CGGAACGCGGCCTCCGTGACCCCGGTGCAGCTGGCTCGAGACTGGCAGCGCGGCATCCGGGAGGCCCTGCAGGC  887
           ..|||.|.|||.|||..|||.||.||||||||||||||||||||||||||.|||||||||||.||.||.|||||
Sbjct 475  AAGAATGTGGCTTCCCAGACACCAGTGCAGCTGGCTCGAGACTGGCAGCGGGGCATCCGGGACGCACTCCAGGC  548

Query 888  CCACGTGGCGCATCCCCGCACCCGGTGC  915
           ||||||||..||||||||.|||||||||
Sbjct 549  CCACGTGGGCCATCCCCGTACCCGGTGC  576