Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05196
- Subject:
- NM_001353231.2
- Aligned Length:
- 1779
- Identities:
- 969
- Gaps:
- 795
Alignment
Query 1 ATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTCTCTTCTGCACGGAGGTGCT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTCTCTTCTGCACGGAGGTGCT 74
Query 75 GCACGCCCCACTTCCTCAAGGGGATGGGAATGAGGACAGTCCTGGCCAGGGTGAGCAGGCGGAAGAAGAGGAAG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCACGCCCCACTTCCTCAAGGGGATGGGAATGAGGACAGTCCTGGCCAGGGTGAGCAGGCGGAAGAAGAGGAAG 148
Query 149 GTGGCATTCAGATGAACAGTCGGATGCGTGCGCACAGCCCCGCAGAGGGGGCCAGCGTCGAGTCCAGCAGCCCG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTGGCATTCAGATGAACAGTCGGATGCGTGCGCACAGCCCCGCAGAGGGGGCCAGCGTCGAGTCCAGCAGCCCG 222
Query 223 GGGCCCAAAAAGTCGGACATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCACCCGGGATATATCAGCCATGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGCCCAAAAAGTCGGACATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCACCCGGGATATATCAGCCATGA 296
Query 297 TAAAGAGACCTCCATTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAAAGAGACCTCCATTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGG 370
Query 371 CCTGTGTCCGGAGCCTGAGCTGTGAGGTCTGCCCTGGCCGTGAAGGCCCCATCTTCTTCGGAGATGAGCAGCAC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTGTGTCCGGAGCCTGAGCTGTGAGGTCTGCCCTGGCCGTGAAGGCCCCATCTTCTTCGGAGATGAGCAGCAC 444
Query 445 GGCTTTGTGTTCAGCCACACCTTCTTCATCAAGGACAGCCTGGCCAGGGGCTTCCAGCGCTGGTACAGCATCAT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCTTTGTGTTCAGCCACACCTTCTTCATCAAGGACAGCCTGGCCAGGGGCTTCCAGCGCTGGTACAGCATCAT 518
Query 519 CACCATCATGATGGACCGGATCTACCTCATCAACTCCTGGCCCTTCCTGCTGGGGAAGGTCCGGGGAATCATCG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCATCATGATGGACCGGATCTACCTCATCAACTCCTGGCCCTTCCTGCTGGGGAAGGTCCGGGGAATCATCG 592
Query 593 ATGAGCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGAGCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATG 666
Query 667 AACACAGCCTTCACGCCATTCCTACACCAGAGGAACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AACACAGCCTTCACGCCATTCCTACACCAGAGGAACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGA 740
Query 741 TGACAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTGGCTCCTGAAGGCGTGTGGCAGCCGGCTGACCGAGA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGACAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTGGCTCCTGAAGGCGTGTGGCAGCCGGCTGACCGAGA 814
Query 815 AGCTCCTGGAAGGTGCTCCGACCGAGGATACCTTGGTCCAGATGGAGAAGCTCGCTG----------------- 871
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCTCCTGGAAGGTGCTCCGACCGAGGATACCTTGGTCCAGATGGAGAAGCTCGCTGATTTAGAAGAGGAATCA 888
Query 872 ----------------GTGAGGC---AGGGG-------------TGCTGTTGCC------------------GG 895
.|||||| ||.|| || ||||||| ||
Sbjct 889 GAAAGCTGGGACAACTCTGAGGCTGAAGAGGAGGAGAAAGCCCCTG-TGTTGCCAGAGAGTACAGAAGGGCGGG 961
Query 896 GGCCTTGGCCCGGATGGCCGTGGGGCGGTACCAGCTGT-CTGCTCTC-CTGGCAGGAATCGCTGAGGGAGGGAA 967
.|| ||.||| |.|||| ||| ||| .|| ||.||||| || ||| ||||.|||||
Sbjct 962 AGC--TGACCC--AGGGCC------CGG---CAG-AGTCCTCCTCTCTCT--CAG-----GCTGTGGGAG---- 1010
Query 968 ACGCGGCTCTGAATCAGCCCAGAA-----CGAGCCTTCGGGAAGCTCACCCTCCG----AT----------CTC 1022
||| .||||||.|.| |.||.|||| ||| .||||||| || ||.
Sbjct 1011 --------CTG--GCAGCCCCGGAAGCTGCCAGTCTTC---AAG---TCCCTCCGGCACATGAGGCAGGTCCTG 1068
Query 1023 GGTG---------------------------------------------------------------------- 1026
||||
Sbjct 1069 GGTGCCCCTTCTTTCCGCATGCTGGCCTGGCACGTTCTCATGGGGAACCAGGTGATCTGGAAAAGCAGAGACGT 1142
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1143 GGACCTCGTCCAGTCAGCTTTTGAAGTACTTCGGACCATGCTTCCCGTGGGCTGCGTCCGCATCATCCCATACA 1216
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1217 GCAGCCAGTACGAGGAGGCCTATCGGTGCAACTTCCTGGGGCTCAGCCCGCACGTGCAGATCCCCCCCCACGTG 1290
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1291 CTCTCCTCAGAGTTTGCTGTCATCGTGGAGGTCCACGCAGCCGCACGTTCCACCCTCCACCCTGTGGGGTGTGA 1364
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1365 GGATGACCAGTCTCTCAGCAAGTACGAGTTTGTGGTGACCAGTGGGAGCCCTGTAGCTGCAGACCGAGTGGGCC 1438
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1439 CCACCATCCTGAATAAGATTGAAGCGGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCCTC 1512
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1513 GTCTGCCTCAAGGAGGAGTGGATGAACAAAGTGAAGGTGCTTTTTAAGTTCACCAAGGTGGACAGTCGACCCAA 1586
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1587 AGAGGACACACAGAAGCTGCTGAGCATCCTGGGTGCGTCCGAGGAGGACAATGTCAAGCTGCTGAAGTTCTGGA 1660
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1661 TGACTGGCCTGAGCAAGACCTACAAGTCACACCTCATGTCCACGGTCCGCAGCCCCACAGCCTCGGAGTCTCGG 1734
Query 1027 --- 1026
Sbjct 1735 AAC 1737
