Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05196
- Subject:
- XR_001752445.2
- Aligned Length:
- 2263
- Identities:
- 969
- Gaps:
- 1279
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGTCACGCGCCTGGGTGTCGGCGGGGCTGCGGGACCGCGAGTGAGTGTGGTCGCTCCTGGTTCTGCCAGCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGAGAGCCTGAACCCGGGCTTGAGAGCCTCGCCACCCCGGGTGACATCCCTGCCGTGGGCTTGGGGGCTCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTGTGATTCCGCCGGTCCGGGTCCCGCAGCGACCACCTACCCAGCGCAGTCAGGGGCGGGGCTGGGACCCAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGGGACCCCGGCTGCCGAGTCCAGGTGTCCCGCGGGCCTCGATTTGGGGAGCAGAAAACGCCAGGTCTTCAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTGTCTGCCACCACCATGCCTGACCCATTTGGCAGCAGCCTCGTGTGTGGTGGTCTGGTGTGGACGGTGGAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTGATTCTGCTGAGTGTCAGTGTGACCACTCGTGCTCAGCCGTATCTCAGCAGGAGGACAGGTGCCGGAGCAG 444
Query 1 ------------------------------------------------------------ATGAATGCCATCGT 14
||||||||||||||
Sbjct 445 CTCGTGCAGCTAAGCAGCCAACTGCAGAAACGTCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGT 518
Query 15 GGCTCTCTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTCTCTTCTGCACGGAGGTGCTGCACGCCCCACTTC 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCTCTCTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTCTCTTCTGCACGGAGGTGCTGCACGCCCCACTTC 592
Query 89 CTCAAGGGGATGGGAATGAGGACAGTCCTGGCCAGGGTGAGCAGGCGGAAGAAGAGGAAGGTGGCATTCAGATG 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCAAGGGGATGGGAATGAGGACAGTCCTGGCCAGGGTGAGCAGGCGGAAGAAGAGGAAGGTGGCATTCAGATG 666
Query 163 AACAGTCGGATGCGTGCGCACAGCCCCGCAGAGGGGGCCAGCGTCGAGTCCAGCAGCCCGGGGCCCAAAAAGTC 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AACAGTCGGATGCGTGCGCACAGCCCCGCAGAGGGGGCCAGCGTCGAGTCCAGCAGCCCGGGGCCCAAAAAGTC 740
Query 237 GGACATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCACCCGGGATATATCAGCCATGATAAAGAGACCTCCA 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGACATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCACCCGGGATATATCAGCCATGATAAAGAGACCTCCA 814
Query 311 TTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAGC 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAGC 888
Query 385 CTGAGCTGTG------------------------------------------------------AGGTCTGCCC 404
|||||||||| ||||||||||
Sbjct 889 CTGAGCTGTGAGTGCAGGGAGAGTGCAGTGGCTGCTCTGACCTGCTGGTTCTTCTGCATGCTCCAGGTCTGCCC 962
Query 405 TGGCCGTGAAGGCCCCATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAGG 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGGCCGTGAAGGCCCCATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAGG 1036
Query 479 ACAGCCTGGCCAGGGGCTTCCAGCGCTGGTACAGCATCATCACCATCATGATGGACCGGATCTACCTCATCAAC 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACAGCCTGGCCAGGGGCTTCCAGCGCTGGTACAGCATCATCACCATCATGATGGACCGGATCTACCTCATCAAC 1110
Query 553 TCCTGGCCCTTCCTGCTGGGGAAGGTCCGGGGAATCATCGATGAGCTCCAGGGCAAGGCGCTCAAGGTGTTTGA 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCCTGGCCCTTCCTGCTGGGGAAGGTCCGGGGAATCATCGATGAGCTCCAGGGCAAGGCGCTCAAGGTGTTTGA 1184
Query 627 GGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCATTCCTACACCAGAGGA 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCATTCCTACACCAGAGGA 1258
Query 701 ACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTCCTTT 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTCCTTT 1332
Query 775 GCCTGGCTCCTGAAGGCGTGTGGCAGCCGGCTGACCGAGAAGCTCCTGGAAGGTGCTCCGACCGAGGATACCTT 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCCTGGCTCCTGAAGGCGTGTGGCAGCCGGCTGACCGAGAAGCTCCTGGAAGGTGCTCCGACCGAGGATACCTT 1406
Query 849 GGTCCAGATGGAGAAGCTCGCTG---------------------------------GTGAGGC---AGGGG--- 883
||||||||||||||||||||||| .|||||| ||.||
Sbjct 1407 GGTCCAGATGGAGAAGCTCGCTGATTTAGAAGAGGAATCAGAAAGCTGGGACAACTCTGAGGCTGAAGAGGAGG 1480
Query 884 ----------TGCTGTTGCC------------------GGGGCCTTGGCCCGGATGGCCGTGGGGCGGTACCAG 929
|| ||||||| ||.|| ||.||| |.|||| ||| |||
Sbjct 1481 AGAAAGCCCCTG-TGTTGCCAGAGAGTACAGAAGGGCGGGAGC--TGACCC--AGGGCC------CGG---CAG 1540
Query 930 CTGT-CTGCTCTC-CTGGCAGGAATCGCTGAGGGAGGGAAACGCGGCTCTGAATCAGCCCAGAA-----CGAGC 996
.|| ||.||||| || ||| ||||.||||| ||| .||||||.|.| |.||.
Sbjct 1541 -AGTCCTCCTCTCTCT--CAG-----GCTGTGGGAG------------CTG--GCAGCCCCGGAAGCTGCCAGT 1592
Query 997 CTTCGGGAAGCTCACCCTCCG----AT----------CTCGGTG------------------------------ 1026
|||| ||| .||||||| || ||.||||
Sbjct 1593 CTTC---AAG---TCCCTCCGGCACATGAGGCAGGTCCTGGGTGCCCCTTCTTTCCGCATGCTGGCCTGGCACG 1660
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1661 TTCTCATGGGGAACCAGGTGATCTGGAAAAGCAGAGACGTGGACCTCGTCCAGTCAGCTTTTGAAGTACTTCGG 1734
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1735 AGTTTGCTGTCATCGTGGAGGTCCACGCAGCCGCACGTTCCACCCTCCACCCTGTGGGGTGTGAGGATGACCAG 1808
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1809 TCTCTCAGCAAGTACGAGTTTGTGGTGACCAGTGGGAGCCCTGTAGCTGCAGACCGAGTGGGCCCCACCATCCT 1882
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1883 GAATAAGATTGAAGCGGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCCTCGTCTGCCTCA 1956
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1957 AGGAGGAGTGGATGAACAAAGTGAAGGTGCTTTTTAAGTTCACCAAGGTGGACAGTCGACCCAAAGAGGACACA 2030
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2031 CAGAAGCTGCTGAGCATCCTGGGTGCGTCCGAGGAGGACAATGTCAAGCTGCTGAAGTTCTGGATGACTGGCCT 2104
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2105 GAGCAAGACCTACAAGTCACACCTCATGTCCACGGTCCGCAGCCCCACAGCCTCGGAGTCTCGGAACTGACCCG 2178
Query 1027 ------------------------------------------- 1026
Sbjct 2179 TCACACACACCTGCCTAAAGACAGGGATGGCTGTCCACAGGAT 2221
