Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05205
- Subject:
- XM_011516915.2
- Aligned Length:
- 2500
- Identities:
- 1478
- Gaps:
- 980
Alignment
Query 1 ------------------------------------------------ATGTCATACGGATCCATCGCCCGTGG 26
||||||||||||||||||||||||||
Sbjct 1 ATGAACATGCTCAGTGTGGAGGCTGCTGGCCCTGCCATCTGTAAGAAGATGTCATACGGATCCATCGCCCGTGG 74
Query 27 AGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGAT 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGAT 148
Query 101 GTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGG 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGG 222
Query 175 AAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGT 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGT 296
Query 249 TGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTG 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTG 370
Query 323 GGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAG 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAG 444
Query 397 ACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCC 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCC 518
Query 471 CACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTG 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTG 592
Query 545 TGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCC 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCC 666
Query 619 CATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGAC 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGAC 740
Query 693 CTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCA 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCA 814
Query 767 ACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGG 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGG 888
Query 841 AGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGAC 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGAC 962
Query 915 CAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGG 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGG 1036
Query 989 AGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGA 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGA 1110
Query 1063 GTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAA---CAGAG 1133
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1111 GTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAG 1184
Query 1134 TCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCC 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCC 1258
Query 1208 AGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTG 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTG 1332
Query 1282 CAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGA 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGA 1406
Query 1356 AGCTGTTG------ATAGTATTGAAGCCA---GCCTTGAG-GCTGCGTCCTC--GCATGCGGAGGCAGCCCGCC 1417
|||||||| ..||.|...|||||| |||...|| |||||..||.| ||..||.|.||||||||..|
Sbjct 1407 AGCTGTTGGGTCCAGCAGCAGCAAAGCCATCTGCCAGCAGAGCTGCAGCCCCGAGCCGGCCGCGGCAGCCCTGC 1480
Query 1418 AGCT-----CCTGGCTGGAGC----CAGCC---------GGCACCAACTCC-------AGAGACACAAGATCAA 1466
.||| ||.|||.|| || ||.|| |||.||.||||| |||.||.||||..|||
Sbjct 1481 TGCTGGGTGCCGGGCCGG-GCTCCACACCCCTGCGGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAA 1553
Query 1467 ----------------------GTGCTGCTTC----------------CTATCAGCTGGAG-TCACTGCCCTGC 1501
||||||.|.| |||.|.||||..| ||...||.||||
Sbjct 1554 CTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCACTACCCGCTGCTGTTCGGGGCGCTGC 1627
Query 1502 TTGTCATCATCATCATCATCGCCACCTCTGTCCGAAAG------------------------------------ 1539
..|.|| ||| |||.|||||||
Sbjct 1628 GGGGCA----------------CAC--CTGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAAC 1683
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1684 GCGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAGCACAAGTGGCGGGACCTGCGAGGTGCTGTGCGCAA 1757
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1758 GAAGCTGGCGGAGGGCGGCCCCGCCCCCGGCCTCCTCCTCACACCTGTGGAGCGCATGGTGGCAGAGACCTTTT 1831
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1832 CTGCCCACGGTCCCCAAGGCGAGGGCCAGACCACGGAGCCCCTGCCAACTGATGAGGAGGACGAGACCCCCAGC 1905
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1906 TGCTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGCCCAGCCTGCCTGAACCTGACCCCCTGGACTTACGAGGAGT 1979
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1980 CTTCCACGCACCCACCTCCTCACCCTCCCCACCTGCTTCCCCAGCCTCCACCCCACCAGCAACCACACTCATGG 2053
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2054 GGGCCTTCCAGCCTTCCCCGCCCTCTTCGGCGCCAGCACCTCCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCA 2127
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2128 TCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCACCGGCAGCAGGGCGCCCTGCTGTCCTCCTGGGC 2201
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2202 CCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGG 2275
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2276 CCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGAAGCACGCCCTACCCGGGAAGCCTCACCC 2349
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2350 TCACTCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGGGGCCTGCTGGAGGCTCCCAGGACAGCCCCAAGGG 2423
Query 1540 ---------------------------------------------------------- 1539
Sbjct 2424 CACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATA 2481
