Nucleotide Global Alignment

Description

• Query: ccsbBroad304_05234
• Subject: XM_006510396.3
• Aligned Length: 1272
• Identities: 795
• Gaps: 375

Alignment

Query    1  ATGGATCAACCTAGTGGAAGAAGTTTCATGCAAGTATTATGTGAAAAATATAGTCCTGAAAATTTTCCTTATCG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCGTGGCCCGGGGATGGGAGTCCATGTCCCAGCCACACCTCAGGGCTCTCCTATGAAAGATCGCCTCAACCTCC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAAGTGTACTAGTGTTGAACAGCTGTGGAATAACCTGTGCAGGAGATGAAAAAGAAATTGCTGCTTTCTGCGCT  222
                                                         ||||||.||||||.||.||.|||||.|||
Sbjct    1  ---------------------------------------------ATGAAAGAGAAATCGCAGCCTTCTGTGCT  29

Query  223  CATGTGTCGGAACTAGATCTTTCTGACAACAAACTCGAAGACTGGCATGAGGTCAGTAAAATTGTGTCAAATGT  296
            ||.|||||.|||||.|||||||||||||||||.|||.|||||||||||||||                      
Sbjct   30  CACGTGTCAGAACTCGATCTTTCTGACAACAAGCTCCAAGACTGGCATGAGG----------------------  81

Query  297  TCCTCAGTTGGAGTTTCTAAACCTGAGTTCCAACCCTCTGAATTTGTCGGTTTTAGAAAGAACATGTGCTGGGT  370
                                                                                      
Sbjct   82  --------------------------------------------------------------------------  81

Query  371  CCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGATACTACAG  444
                                                                                      
Sbjct   82  --------------------------------------------------------------------------  81

Query  445  GAGTTACCAGATTTGGAGGAGCTCTTCCTGTGCCTTAATGACTATGAAACAGTGTCTTGTCCTTCTATTTGCTG  518
                        ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|||||
Sbjct   82  ------------TTGGAGGAGCTCTTCCTGTGCCTTAATGACTATGAAACAGTGTCTTGTCCTTCTGTCTGCTG  143

Query  519  TCATTCTCTTAAGCTACTACATATAACAGACAATAACCTCCAAGACTGGACTGAAATACGAAAGTTAGGAGTTA  592
            ||||||.||.|||||.|||||.||.||||||||.|||||||||||||||||||||||.||||||.|.||.||.|
Sbjct  144  TCATTCCCTCAAGCTCCTACACATCACAGACAACAACCTCCAAGACTGGACTGAAATCCGAAAGCTGGGTGTAA  217

Query  593  TGTTTCCTTCACTGGATACCCTCGTCCTGGCCAACAATCATTTGAATGCTATTGAGGAGCCTGATGATTCATTG  666
            ||||||||||||||||||||||.|||||||||||||||||.||||||||.||.||||||||||.|||.||..||
Sbjct  218  TGTTTCCTTCACTGGATACCCTGGTCCTGGCCAACAATCACTTGAATGCAATCGAGGAGCCTGCTGACTCCCTG  291

Query  667  GCCAGGTTGTTTCCTAATCTTCGATCCATCAGCCTCCACAAGTCAGGTTTGCAGTCCTGGGAAGACATTGATAA  740
            ||.||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  292  GCTAGGTTGTTCCCTAATCTGCGGTCCATCAGCCTCCACAAGTCAGGTTTGCAGTCCTGGGAAGACATTGACAA  365

Query  741  ACTAAATTCATTTCCCAAACTGGAAGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGG  814
            ||||||||||||.|||||.||.|||||||||||||||.||||||||||||||||.|||||.|||||||||||||
Sbjct  366  ACTAAATTCATTCCCCAAGCTTGAAGAAGTGAGATTGCTAGGAATTCCTCTTCTACAGCCGTATACCACCGAGG  439

Query  815  AGCGAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGATGGTGAA  888
            |.||.|||||||||||..|.|||||||||||.||.|||||||||||.||||||||.|||||.||.||||||||.
Sbjct  440  AACGCAGGAAATTGGTGGTGGCCAGATTGCCCTCCGTTTCCAAACTCAATGGCAGTGTTGTGACGGATGGTGAG  513

Query  889  CGAGAAGATTCTGAGAGATTTTTTATTCGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCATTCAGGTATCA  962
            |||||.|||||.|||||.|||||.||.||.|||||.|||||||||||.|||||.||||||||||||||||||||
Sbjct  514  CGAGAGGATTCCGAGAGGTTTTTCATCCGGTACTACGTGGATGTTCCTCAGGAGGAAGTGCCATTCAGGTATCA  587

Query  963  TGAACTGATCACTAAATATGGGAAGTTGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAG  1036
            |||.||.||.||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  588  TGAGCTCATTACAAAATATGGGAAATTGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCGAAAG  661

Query 1037  TAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACAGTGGCAGAACTAAAGAAA  1110
            |||||||.|||||.||.||.||.|||||.|||||||||||.||.||||||||.|||||.||.|||||.||||||
Sbjct  662  TAGAAGTTCACTTCAATGACCAAGTGGAGGAAATGAGCATCCGCCTGGACCAGACAGTAGCCGAACTGAAGAAA  735

Query 1111  CAGTTAAAAACTCTAGTACAATTACCCACAAGCAACATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTGG  1184
            |||.||||.||.||.||.||.||.|||||.||||.|||||||||||||||.||||||||.||.||.||.|||||
Sbjct  736  CAGCTAAAGACCCTGGTGCAGTTGCCCACCAGCAGCATGCTTCTCTACTACTTTGACCACGAGGCCCCGTTTGG  809

Query 1185  CCCAGAGGAAATGAAGTACAGCTCTCGGGCATTGCATTCCTTTGGCATTAGGGATGGAGATAAAATTTACGTGG  1258
            |||||||||.||||||||||||||.||||||.||||.|||||||||||||||||||||||||||||||..||||
Sbjct  810  CCCAGAGGAGATGAAGTACAGCTCCCGGGCACTGCACTCCTTTGGCATTAGGGATGGAGATAAAATTTTTGTGG  883

Query 1259  AATCCAAAACAAAA  1272
            ||||.|||||||||
Sbjct  884  AATCAAAAACAAAA  897