Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05241
- Subject:
- NR_134858.1
- Aligned Length:
- 2449
- Identities:
- 550
- Gaps:
- 1885
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCCCTTTCGGACTCGGTTATGGAGGAGGCCTTCCGCTCGCAGCGGCCTCTCCAGCACCCCTTTTAGGCCTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCACCCGCAGGGGTGCCCAGGCCGCACGCCAAACGCGGGCCCGCGCCGGTTACCTGGCTGCGCGCTCCCGCTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTCGCGATTCTCCGGAATCGTACCTCTTCGTGGGCTCGCGCCAGCGCTGTGAGCGCACAATTAGTTTAAACT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGGCCCCGCCCCCTCGCGCTGCCCTCTGATTGGCCTCTGTCGGCGGGGCCCGCTTAAGGACCCGGGAAAAGGA 296
Query 1 -----------------------------------------------------------ATGAA--CAAACGGG 13
.|||| ||||..|.
Sbjct 297 AGTTTGAGGGCCACTGGGAAAGAGAAGGGGTATCACCGCTTCCGGACCCCGGCCTGTACTTGAAGGCAAAGAGA 370
Query 14 ACTATATGAA---CA--------------CTTCGGTACAGGAGCCCC-CTCTTGACTACTCCTTCAG------- 62
||||.| || || ||| |.|||||| |.|.||||.| .||..||
Sbjct 371 ACTACA--AATCCCAGCGTCACCCGCGGCCTT-------GAAGCCCCGCCCCTGACAA--ACTGAAGGTCCCGG 433
Query 63 -AAGCATCCACGTCATT--------------------------------------------------------- 78
|||||| |.|||||.|
Sbjct 434 TAAGCAT-CGCGTCAGTACTTATGGCGCCTGCCGGGTTGTGGTGACGAAAGCAGTTGCCATGGAGTTGCTCTGA 506
Query 79 -----------------------CAA----------------------GATCTGGTAAATGAGGAGCCAAGGAC 107
||| ||||||||||||||||||||||||||
Sbjct 507 GTAACCCTGAGGCAGTGGGACGCCAAGACTGGAGAGGAAGCGACTGCGGATCTGGTAAATGAGGAGCCAAGGAC 580
Query 108 AGGACTACGACCACTGAAGCGTTCAAAGTCGGGGAAATCACTGACCCAGTCCCTGTGGCTGAATAACAATGTTC 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 581 AGGACTACGACCACTGAAGCGTTCAAAGTCGGGGAAATCACTGACCCAGTCCCTGTGGCTGAATAACAATGTTC 654
Query 182 TCAATGATCTGAGAGACTTCAACCAGGTGGCTTCACAGCTGTTGGAGCACCCAGAGAACCTGGCCTGGATCGAC 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 TCAATGATCTGAGAGACTTCAACCAGGTGGCTTCACAGCTGTTGGAGCACCCAGAGAACCTGGCCTGGATCGAC 728
Query 256 CTGTCCTTTAATGACCTGACTTCCATTGACCCTGTCCTAACAACTTTCTTCAACCTGAGTGTCCTCTATCTTCA 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 729 CTGTCCTTTAATGACCTGACTTCCATTGACCCTGTCCTAACAACTTTCTTCAACCTGAGTGTCCTCTATCTTCA 802
Query 330 CGGCAACAGCATCCAGCGCCTGGGGGAGGTGAATAAGCTGGCTGTCCTTCCTCGGCTCCGTAGCCTGACACTCC 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 803 CGGCAACAGCATCCAGCGCCTGGGGGAGGTGAATAAGCTGGCTGTCCTTCCTCGGCTCCGTAGCCTGACACTCC 876
Query 404 ATGGGAACCCCATGGAGGAAGAGAAAGGGTATAGGCAATATGTGCTGTGCACCCTGTCCCGTATCACCACGTTC 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 877 ATGGGAACCCCATGGAGGAAGAGAAAGGGTATAGGCAATATGTGCTGTGCACCCTGTCCCGTATCACCACGTTC 950
Query 478 GACTTCAGTGGGGTCACCAAAGCAGACCGCACCACAGCTGAAGTCTGGAAACGCATGAACATCAAGCCCAAGAA 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 GACTTCAGTGGGGTCACCAAAGCAGACCGCACCACAGCTGAAGTCTGGAAACGCATGAACATCAAGCCCAAGAA 1024
Query 552 GGCCTGGACCAAGCAGAATACACTT------------------------------------------------- 576
|||||||||||||||||||||||||
Sbjct 1025 GGCCTGGACCAAGCAGAATACACTTTGAGGCTCCCACGACCCTAGTAGTCCTAAAGGCCTAAGCATAGACAGCA 1098
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1099 TGGTTTGACAATAAATAATTTGAGCTGTTGAGCAGATGAGAAGTCACTTACACCTTGTAGAGATGTTCTCTAAC 1172
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1173 TCAGGCAACTGCAAGTAGCTCTAGCCTTTTCTTTTCTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCACA 1246
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1247 CAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCAGCCTCCCAGGTTCAAGAGATTCTCCTGCCT 1320
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1321 CAGCCTCCCCAGTAGCTGTGATTAAAGGCGCCTGCCACCATGACTGGCTAATTTTGTTGTTGTTGTTGTTGTTT 1394
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1395 TGAGACGGTTTCACTCGTCACCCCAGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCCGCCTGCTG 1468
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1469 GGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCTACCACATCCAGCTAAT 1542
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1543 TTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAA 1616
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1617 CTCCGCCTTCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTATAGGCACCTACTACCA 1690
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1691 CGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCCATCTCCTG 1764
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1765 ACCTTGTGATCCACCCACCTCGGCTTCCCCCAGCTAATTTTTTATATTTTAGTAGAGACAAGGTTTCGCCATGT 1838
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1839 TGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGTCTGCTTTGGCCTCCCAAAGTGCTGGGATTAGAA 1912
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1913 GCGTGAGCCACCACGCCCAGCCTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAGGCTGGT 1986
Query 577 -------------------------------------------------------------------------- 576
Sbjct 1987 CTCAAACTCCTGACCTCAGGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTAGGATTACAGGATAAGCCACTGC 2060
Query 577 -------------------------------------------------------------------------- 576
Sbjct 2061 ACCTGGCCAGCTCTAGTCTTATTTTGCTGAAAAAGGGAGGCAATTGAGGGAAAGGCCTGCTGGCCTGGGACACT 2134
Query 577 -------------------------------------------------------------------------- 576
Sbjct 2135 GGAGACGTGGGTTTACCACACAGCCTTGGGAAATTTATCTAACTCTCTGGGCCCCTTTGTACTTTTCAGCTTAG 2208
Query 577 -------------------------------------------------------------------------- 576
Sbjct 2209 AGATTTGGGGGTTAAAGTAGATCAGTAATTTCCAAACTCTTCACAGAGTACCAGGGTCTGTAGAGATGCCTCAC 2282
Query 577 -------------------------------------------------------------------------- 576
Sbjct 2283 AGGCCTCCATGACAGGCCAAGAAGATGGCCTATGATCTCTGAAACCAGCCCCCACTTCAATCAGATCAAAGTAA 2356
Query 577 -------------------------------------------------------------------------- 576
Sbjct 2357 TTCCATTCTGTTTTATATGCTGGGATTCTGCTTAAGATTTCATTTGATAAAAAGAATCTTCTGCTTAAAAAAAA 2430
Query 577 ------- 576
Sbjct 2431 AAAAAAA 2437
