Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05289
- Subject:
- NR_104300.2
- Aligned Length:
- 2051
- Identities:
- 907
- Gaps:
- 1144
Alignment
Query 1 -----------------------------------------------------------------ATGAGTGAG 9
|||||||||
Sbjct 1 ACTCTGCTCCTGCGACCTAGCCAGGCGTGAGGGAGTGACAGCAGCGCATTCGCGGGACGAGAGCGATGAGTGAG 74
Query 10 AACGCCGCACCAGGTCTGATCTCAGAGCTGAAGCTGGCTGTGCCCTGGGGCCACATCGCAGCCAAAGCCTGGGG 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AACGCCGCACCAGGTCTGATCTCAGAGCTGAAGCTGGCTGTGCCCTGGGGCCACATCGCAGCCAAAGCCTGGGG 148
Query 84 CTCCCTGCAGGGCCCTCCAGTTCTCTGCCTGCACGGCTGGCTGGACAATGCCAGCTCCTTCGACAGACTCATCC 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTCCCTGCAGGGCCCTCCAGTTCTCTGCCTGCACGGCTGGCTGGACAATGCCAGCTCCTTCGACAGACTCATCC 222
Query 158 CTCTTCTCCCGCAAGACTTTTATTACGTTGCCATGGATTTCGGAGGTCATGGGCTCTCGTCCCATTACAGCCCA 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTCTTCTCCCGCAAGACTTTTATTACGTTGCCATGGATTTCGGAGGTCATGGGCTCTCGTCCCATTACAGCCCA 296
Query 232 GGTGTCCCATATTACCTCCAGACTTTTGTGAGTGAGATCCGAAGAGTTGTGGCAGCCTTGAAATGGAATCGATT 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTGTCCCATATTACCTCCAGACTTTTGTGAGTGAGATCCGAAGAGTTGTGGCAGCCTTGAAATGGAATCGATT 370
Query 306 CTCCATTCTGGGCCACAGCTTC----------------GGTGGCGTCGTGGGCGGAATGTTTTTCTGTACCTTC 363
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCCATTCTGGGCCACAGCTTCGCTCTTTTGTCCCCCAGGTGGCGTCGTGGGCGGAATGTTTTTCTGTACCTTC 444
Query 364 CCCGAGATGGTGGATAAACTTATCTTGCTGGACACGCCGCTCTTTCTCCTGGAATCAGATGAAATGGAGAACTT 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCGAGATGGTGGATAAACTTATCTTGCTGGACACGCCGCTCTTTCTCCTGGAATCAGATGAAATGGAGAACTT 518
Query 438 GCTGACCTACAAGCGGAGAGCCATAGAGCACGTGCTGCAGGTAGAGGCCTCCCAGGAGCCCTCGCACGTGTTCA 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGACCTACAAGCGGAGAGCCATAGAGCACGTGCTGCAGGTAGAGGCCTCCCAGGAGCCCTCGCACGTGTTCA 592
Query 512 GCCTGAAGCAGCTGCTGCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTGCGGGGAGCTTCTCCTG 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCTGAAGCAGCTGCTGCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTGCGGGGAGCTTCTCCTG 666
Query 586 CAAAGAGGAACCACGAAGGTGGCCACAGGTCTGGTTCTGAACAGAGACCAGAGGCTCGCCTGGGCAGAGAACAG 659
||||||||||||||||||||||||||| ||||||||||||
Sbjct 667 CAAAGAGGAACCACGAAGGTGGCCACA-----------------------------------GGCAGAGAACAG 705
Query 660 CATTGACTTCATCAGCAGGGAGCTGTGTGCGCATTCCATCAGGAAGCTGCAGGCCCATGTCCTGTTGATCAA-- 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 CATTGACTTCATCAGCAGGGAGCTGTGTGCGCATTCCATCAGGAAGCTGCAGGCCCATGTCCTGTTGATCAAGT 779
Query 732 -------------------------------------------------------------------------- 731
Sbjct 780 AAGTCTGGACCCATCCCCTTCAGCCACCCGCCAAGGAGACATGGGCGCCAGGAATCTCCGGGAGGGGGCCCTGG 853
Query 732 -------------------------------------------------------------------------- 731
Sbjct 854 CATGAGGCTCCAAGTTCTCTGCGTGTCGACCACATCGCTAAGGCTCAAGATCTTTTTTGGGAAGCCCCCCTGGC 927
Query 732 -------------------------------------------------------------------------- 731
Sbjct 928 AGCAGGGTCATGGAAGGAGGAAGGTCAGAGGAGGGGAGGGCTCGGGCAGCAGGGGATGGGCCGGGGCTGTCCCA 1001
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1002 TGCCTTTCCACAGGTGTCAGCGGGGGGCATGCCCAGGTAAGGCTCCATAACCAGTGAGCCCAGTCTCGGCTGAC 1075
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1076 TGCAACCTCTGTCTCCTGGATTCAAACGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCG 1149
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1150 CCACCAGGCCTGGCTTATTTTTGTATTTTTAGTAGAGACGAGGTTTCGCCATGTTGGCCAGGCTGCTCTCCATC 1223
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1224 TCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAGTGTTGGGATTACAGGCGTGAGCCACCGTGCGTGGCCCA 1297
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1298 CCATAGACGATTTTTAAGCCATAAAAAGAAACGAAGCACTGACACGGGCTCCAGCATGGATGAGCCTTTAAAAC 1371
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1372 ATCGCGCTAAGTGGACGAATTCAGACACAACCGTCTACGTGTTGTATGGCTGCATTCACGTTCAAGTCAAGTCC 1445
Query 732 ------------------------------AGCAGTCCACGGATATTTTGATTCAAGACAGAATTACTCTGAGA 775
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 AAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTTGATTCAAGACAGAATTACTCTGAGA 1519
Query 776 AGGAGTCCCTGTCGTTCATGATAGACACGATGAAATCCACCCTCAAAGAGCAGTTCCAGTTTGTGGAAGTCCCA 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1520 AGGAGTCCCTGTCGTTCATGATAGACACGATGAAATCCACCCTCAAAGAGCAGTTCCAGTTTGTGGAAGTCCCA 1593
Query 850 GGCAATCACTGTGTCCACATGAGCGAACCCCAGCACGTGGCCAGTATCATCAGCTCCTTCTTACAGTGCACACA 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1594 GGCAATCACTGTGTCCACATGAGCGAACCCCAGCACGTGGCCAGTATCATCAGCTCCTTCTTACAGTGCACACA 1667
Query 924 CATGCTCCCAGCCCAGCTG------------------------------------------------------- 942
|||||||||||||||||||
Sbjct 1668 CATGCTCCCAGCCCAGCTGTAGCTCTGGGCCTGGAACTATGAAGACCTAGTGCTCCCAGACTCAACACTGGGAC 1741
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1742 TCTGAGTTCCTGAGCCCCACAACAAGGCCAGGGATGGTGGGGACAGGCCTCACTAGTCTTGAGGCCCAGCCTAG 1815
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1816 GATGGTAGTCAGGGGAAGGAGCGAGATTCCAACTTCAACATCTGTGACCTCAAGGGGGAGACAGAGTCTGGGTT 1889
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1890 CCAGGGCTGCTTTCTCCTGGCTAATAATAAATATCCAGCCAGCTGGAGGAAGGAAGGGCAGGCTGGGCCCACCT 1963
Query 943 ----------------------------------------------------- 942
Sbjct 1964 AGCCTTTCCCTGCTGCCCAACTGGATGGAAAATAAAAGGTTCTTGTATTCTCA 2016
