Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05405
- Subject:
- XR_001742057.1
- Aligned Length:
- 1924
- Identities:
- 1242
- Gaps:
- 677
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAACCGGCATCGCCGCCGCCGGAGCCGCAGCGAGTCCTCAGAGCCTGGCTGCTGGCGGCCGGGAGCGCCGGGAC 74
Query 1 -------------------------------------ATGAAAAGAAGCAAAGAATTGATAACTAAAAATCATA 37
|||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGGCGCGAAGCCGGAGGCTCCGGGACGTGGATACAGATGAAAAGAAGCAAAGAATTGATAACTAAAAATCATA 148
Query 38 GTCAAGAGGAAACAAGTATTCTTCGTTGTTGGAAATGTAGAAAATGTATAGCAAGCTCTGGTTGTTTTATGGAG 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTCAAGAGGAAACAAGTATTCTTCGTTGTTGGAAATGTAGAAAATGTATAGCAAGCTCTGGTTGTTTTATGGAG 222
Query 112 TATCTTGAGAATCAAGTGATTAAGGATAAAGATGATTCAGTTGATGCTCAAAATATTTGTCATGTGTGGCACAT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TATCTTGAGAATCAAGTGATTAAGGATAAAGATGATTCAGTTGATGCTCAAAATATTTGTCATGTGTGGCACAT 296
Query 186 GAATGTAGAAGCCCTTCCAGAATGGATAAGCTGCCTAATCCAAAAAGCCCAGTGGACAGTTGGAAAACTGAATT 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAATGTAGAAGCCCTTCCAGAATGGATAAGCTGCCTAATCCAAAAAGCCCAGTGGACAGTTGGAAAACTGAATT 370
Query 260 GTCCTTTCTGTGGGGCCCGTTTAGGGGGCTTTAATTTTGTCAGCACTCCAAAATGTTCCTGTGGCCAGCTTGCA 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTCCTTTCTGTGGGGCCCGTTTAGGGGGCTTTAATTTTGTCAGCACTCCAAAATGTTCCTGTGGCCAGCTTGCA 444
Query 334 GCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGCAGGCAGACTAATGAGACCATCAGTGAA 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGCAGGCAGACTAATGAGACCATCAGTGAA 518
Query 408 ATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTCTGCTGACAGGTGGTGGCTCTGAAAACA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTCTGCTGACAGGTGGTGGCTCTGAAAACA 592
Query 482 GAAATCACAGGCTTTTAAACATGGCCCGAAATAATAATGACCCTGGAAGATTAACAGAAGCACTCTGCCTGGAG 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAAATCACAGGCTTTTAAACATGGCCCGAAATAATAATGACCCTGGAAGATTAACAGAAGCACTCTGCCTGGAG 666
Query 556 GTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCAAAGCATCAGAACCAAAATACCAGCTTTT 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCAAAGCATCAGAACCAAAATACCAGCTTTT 740
Query 630 TGTTCCCCAGCTTGTGACTGGCAGATGCGCTACAAGAGCTTTTCATAGAAAATCACATAGTTTGGATCTGAACA 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGTTCCCCAGCTTGTGACTGGCAGATGCGCTACAAGAGCTTTTCATAGAAAATCACATAGTTTGGATCTGAACA 814
Query 704 TCAGTGAGAAACTGACTTTATTACCCACTTTATATGAAATACATAGTAAGACTACTGCCTATTCCAGACTAAAT 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCAGTGAGAAACTGACTTTATTACCCACTTTATATGAAATACATAGTAAGACTACTGCCTATTCCAGACTAAAT 888
Query 778 GAAACACAGCCTATTGACCTTTCAGGCTTGCCTTTACAATCTAGTAAAAATAGCTATTCCTTTCAGAATCCATC 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAAACACAGCCTATTGACCTTTCAGGCTTGCCTTTACAATCTAGTAAAAATAGCTATTCCTTTCAGAATCCATC 962
Query 852 CAGTTTTGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGCCCCCCATGAGACCCAGACACAAAGAGGAGGAG 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAGTTTTGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGCCCCCCATGAGACCCAGACACAAAGAGGAGGAG 1036
Query 926 AATTTCAGTGTGGTCTAGAAGCTGCTTCAGTGTATTCTGACCATACTAATACTAACAATCTGACTTTCCTGATG 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AATTTCAGTGTGGTCTAGAAGCTGCTTCAGTGTATTCTGACCATACTAATACTAACAATCTGACTTTCCTGATG 1110
Query 1000 GACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGAAGAGCACCTCTCCCCTCTGGACTTCCT 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGAAGAGCACCTCTCCCCTCTGGACTTCCT 1184
Query 1074 GCACTCAGCCAATTTTTCATTGGGCAGCATTAATCAGAGGCTTAATAAGAGAGAAAGGAGCAAGTTGAAGAATC 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCACTCAGCCAATTTTTCATTGGGCAGCATTAATCAGAGGCTTAATAAGAGAGAAAGGAGCAAGTTGAAGAATC 1258
Query 1148 TAAGAAGGAAACAACGAAGGCGTGAAAGATGGCTACAGAAGCAGGGTAAATACTCAGGAGTGGGATTGCTGGAT 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TAAGAAGGAAACAACGAAGGCGTGAAAGATGGCTACAGAAGCAGGGTAAATACTCAGGAGTGGGATTGCTGGAT 1332
Query 1222 CATATGGTAAGTATATATTT-----ACTT---ATA--------------------------------------- 1248
||||||.|...| |||.||| |||| |||
Sbjct 1333 CATATGTTTTCT-TATGTTTTGCAGACTTTGAATAATGAGATGAGTACAGATGAAGACAATGAATATGCAGAAG 1405
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1406 AAAAGGATAGCTACATCTGTGCAGTGTGTCTGGACGTTTATTTCAACCCTTATATGTGTTACCCTTGCCATCAC 1479
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1480 ATCTTCTGTGAGCCCTGCTTACGGACTCTGGCCAAAGACAATCCTTCAAGCACTCCATGCCCATTGTGTCGGAC 1553
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1554 AATTATTTCTAGAGTCTTTTTCCAAACAGAAGGAGGAGGAAGAGGGAGAGGAAAAGGAAGGGAAGGGAAGGAAT 1627
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1628 AATAAGAATCCTTAAGTTGCAAACTGTTCACCTTCGTTTGTATTATCTGCCATGACACACCACATGGATCTCAT 1701
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1702 TTCCAAGGACATTTAGAAAGTTGTAAAAATCAACCCAAGGCAGTGATTAAGAAAAATTGAGAAAATTTAATTCA 1775
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1776 AATCACTTGAGCCAAAGCTTAAGGCAGTTGAAGTAGGATGGAAACTGAGGAAATGCTACAGAATTGAACAATGC 1849
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1850 CACAAAAACTTTCTTTACTAAAGAATATTTGAAAATAAAACAAAGCTTTCAGAAATCCAACTCTGCAAAATGGC 1923
