Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05500
- Subject:
- XM_017010830.1
- Aligned Length:
- 2838
- Identities:
- 1680
- Gaps:
- 1155
Alignment
Query 1 ATGGAGAGCTTCCACACCAGATTTAGTGCCTGGACACCTTTTAGCAACAAGTCATTAAATAGACAGCTCTTTCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGAGCTTCCACACCAGATTTAGTGCCTGGACACCTTTTAGCAACAAGTCATTAAATAGACAGCTCTTTCA 74
Query 75 GGAAAGAGTGGCTCTTATAAGTCATTGGTTTGACCTCTGGACTAACAAGCAACGTCAAGAATTCTTATTCGCAA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGAAAGAGTGGCTCTTATAAGTCATTGGTTTGACCTCTGGACTAACAAGCAACGTCAAGAATTCTTATTCGCAA 148
Query 149 TTTTTTTAAGATGCACTAAATCACAATTAAGGTTTGTCCAAGACTGGTTTTCAGAAAGGATGCAAGTGGCCAAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTTTTTTAAGATGCACTAAATCACAATTAAGGTTTGTCCAAGACTGGTTTTCAGAAAGGATGCAAGTGGCCAAA 222
Query 223 GTGGACTTCTCTACAGTGTTACCACGCTTCATTTCTCTATATATCTTTTCCTTTTTGAGTCCGAAAGATTTGTG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTGGACTTCTCTACAGTGTTACCACGCTTCATTTCTCTATATATCTTTTCCTTTTTGAGTCCGAAAGATTTGTG 296
Query 297 TGCCGCTGCCCAAGTCAGCTGGCCCTGGAAGTTTTTAACTGAACAGGATTGCTTATGGATGCCCAAATGCGTTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCCGCTGCCCAAGTCAGCTGGCCCTGGAAGTTTTTAACTGAACAGGATTGCTTATGGATGCCCAAATGCGTTA 370
Query 371 AGTTCGGATGGTTTCTGCCCTATACTCCAACAGATAATGAGTATGGTGCTTGGAAGCGCCATTACATTGCTTGT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTTCGGATGGTTTCTGCCCTATACTCCAACAGATAATGAGTATGGTGCTTGGAAGCGCCATTACATTGCTTGT 444
Query 445 GTGTCCCACTTAGACTGGCTGACACCTAGGGAGGCTGCTGCTACTTATGGGACGCTGAATGAACCCAAAACAGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGTCCCACTTAGACTGGCTGACACCTAGGGAGGCTGCTGCTACTTATGGGACGCTGAATGAACCCAAAACAGA 518
Query 519 AGATGAGGAACTACTGGAGAGACAAAGAGAAAAGTGCCTGAGGAAAAGAATTTGGGAGAAAATTGCACTACGTA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGATGAGGAACTACTGGAGAGACAAAGAGAAAAGTGCCTGAGGAAAAGAATTTGGGAGAAAATTGCACTACGTA 592
Query 593 AGAAGGAGTTATTCAAAGTTCGACCCCCTTGGGTGAGTGGAACTTGCTGCTCTAGCGTGCTAAAGCCCAGATGC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGAAGGAGTTATTCAAAGTTCGACCCCCTTGGGTGAGTGGAACTTGCTGCTCTAGCGTGCTAAAGCCCAGATGC 666
Query 667 CAACCACGCCTCTCCCAGACTGTAAGGGAGCGAGTGGGATTACATGAAGCTTTGGAGAAACAGCTTGTTTTGAC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAACCACGCCTCTCCCAGACTGTAAGGGAGCGAGTGGGATTACATGAAGCTTTGGAGAAACAGCTTGTTTTGAC 740
Query 741 ATCGTTAGAAACCTTGCCCAAGCGAAGCAATATTTCTGGAAGCCATTCCTACCCTTTATTATCAAAGAAAAATT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATCGTTAGAAACCTTGCCCAAGCGAAGCAATATTTCTGGAAGCCATTCCTACCCTTTATTATCAAAGAAAAATT 814
Query 815 GGCATGGAGTTCATAAAAATGATGACAGATCTTCATATGCTCTCCGGCCACACTTCATGTTAATATCATCCCGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGCATGGAGTTCATAAAAATGATGACAGATCTTCATATGCTCTCCGGCCACACTTCATGTTAATATCATCCCGG 888
Query 889 ATTCCTGCGTATGAGATGGTGATGGAGAGTGTGAAGGCTGGTGTTGTTTCTGTGGTATATGAACACAGCGTAAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATTCCTGCGTATGAGATGGTGATGGAGAGTGTGAAGGCTGGTGTTGTTTCTGTGGTATATGAACACAGCGTAAC 962
Query 963 CTTGGAAAGCCTTCTGTATCTTATAGAAAAAGCTCTGGATGGGCAGAAGGCACAGAGCATCGGAATATTTAGCG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTTGGAAAGCCTTCTGTATCTTATAGAAAAAGCTCTGGATGGGCAGAAGGCACAGAGCATCGGAATATTTAGCG 1036
Query 1037 ATGGAGACAGCAGAGAAATCAATTTACTCCAAGGCTATAAAATTGGTGTTAAAAATTTACTGAGGCCTGAAGTG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGGAGACAGCAGAGAAATCAATTTACTCCAAGGCTATAAAATTGGTGTTAAAAATTTACTGAGGCCTGAAGTG 1110
Query 1111 AGAGATTTCTGGGAGAAATTAGGAAGCTATGTGGCCACTGAAGAAGAAGGGGGTCACGTGGACTTCTTCGTGCC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGAGATTTCTGGGAGAAATTAGGAAGCTATGTGGCCACTGAAGAAGAAGGGGGTCACGTGGACTTCTTCGTGCC 1184
Query 1185 CCTTGGAGCATCAGAGGCAGGAATTGAAGTTCTTTCCCAGCTGTCTCAACTAACTGGCACGTTCTTTACGGCCC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCTTGGAGCATCAGAGGCAGGAATTGAAGTTCTTTCCCAGCTGTCTCAACTAACTGGCACGTTCTTTACGGCCC 1258
Query 1259 CCACTGGGATTGCAACTGGCTCTTACCAGCACATTCTTAGTGATTGGCTGGGATCCCAATGGGGAAAGGCCCCC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCACTGGGATTGCAACTGGCTCTTACCAGCACATTCTTAGTGATTGGCTGGGATCCCAATGGGGAAAGGCCCCC 1332
Query 1333 TCTTCCATCTACTTCTGCGAATCGAAGCTACAGACGTGGTCCAGCTTCACAGACTTCCTAGAAGAAACCTTGAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCTTCCATCTACTTCTGCGAATCGAAGCTACAGACGTGGTCCAGCTTCACAGACTTCCTAGAAGAAACCTTGAA 1406
Query 1407 AACAGTAAGGAAGCAGCTGTATCCTTTCTTCAAGGAACTGCAGAAGAGCATCAGTGGCAGGATGATAGGGCAGT 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AACAGTAAGGAAGCAGCTGTATCCTTTCTTCAAGGAACTGCAGAAGAGCATCAGTGGCAGGATGATAGGGCAGT 1480
Query 1481 TTATGTTTGACACCATGGGTATGACCAACATTCTAAACAACCAAGATACTGCGCAAGCTCTGGCAGATGGATTG 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTATGTTTGACACCATGGGTATGACCAACATTCTAAACAACCAAGATACTGCGCAAGCTCTGGCAGATGGATTG 1554
Query 1555 ATGGAGTTGTCAAAAGAAGATTCT-------------------------------------------------- 1578
||||||||||||||||||||||||
Sbjct 1555 ATGGAGTTGTCAAAAGAAGATTCTGACAAACCTCTGGAATTTTTGTCGTATTTTCTGCTGAAGAAATGTGGCAA 1628
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1629 AAAGATCAAAGATGTTGAAGGAAATGTTATTCCAACAAAATGTGACCCAAAGACAACATTCAGTTTATTCATGA 1702
Query 1579 --GAAAGAAATGTTGTAGAAGACAATTCTTGGGACACAAAGTCCAGGCTCAGCAAAAATGATTTAAATTTTGAA 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGGAAAGAAATGTTGTAGAAGACAATTCTTGGGACACAAAGTCCAGGCTCAGCAAAAATGATTTAAATTTTGAA 1776
Query 1651 GCACTGATTAATCTGGAGAGAATACTCCAGAAGGACTCAGCAGAAAAGCGAGCTAGAGTTGTCAGAGAACTCTT 1724
|||||||||||||||| || ||||| ||
Sbjct 1777 GCACTGATTAATCTGG------TA--------------------------AGCTA-----------------TT 1801
Query 1725 ACAGAGTGAGAGAAAATACGTGCAGATACTGGAAATTGTGAGAGATGTTTATGTCGCACCACTGAAAGCAGCAT 1798
|.|.|.||
Sbjct 1802 ATATAATG------------------------------------------------------------------ 1809
Query 1799 TGTCATCAAACAGAGCGATTCTGAGTGCTGCCAATATCCAGATCATTTTCTGTGACATTCTACAGATTTTAAGT 1872
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 1873 CTCAACAGGCAGTTTCTAGATAACCTGAGAGACAGACTGCAGGAATGGGGCCCAGCTCACTGTGTGGGAGAAAT 1946
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 1947 AGTCACGAAGTTTGGAAGCCAGTTAAACACATATACCAATTTCTTCAACAATTACCCTGTCATTCTGAAAACTA 2020
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2021 TTGAGAAGTGCAGAGAAATGATACCAGCATTCCGAACTTTCCTGAAGAGGCATGATAAGACCATTGTTACCAAA 2094
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2095 ATGCTGAGCCTGCCAGAGCTGCTGCTGTACCCATCCCGAAGATTTGAAGAATACCTTAATCTTCTCTACGCTGT 2168
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2169 CAGGCTTCATACCCCTGCAGAGCATGTTGACCGTGGGGACTTGACCACTGCAATTGACCAAATCAAAAAATATA 2242
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2243 AAGGTTATATAGATCAGATGAAGCAAAACATCACTATGAAGGATCATCTGTCAGATATACAGAGAATCATCTGG 2316
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2317 GGATGCCCTACTCTATCAGAAGTAAACAGATATCTGATTAGGGTACAAGATGTAGCCCAACTTCATTGCTGTGA 2390
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2391 TGAAGAAATAAGTTTCTCTTTAAGGCTCTATGAACACATCCATGATCTCAGCCTTTTCCTCTTCAATGATGCCC 2464
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2465 TGCTCGTTTCTAGTCGGGGCACATCTCACACTCCATTTGAGAGGACTTCAAAAACAACCTACCAGTTCATTGCA 2538
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2539 TCAGTGGCCCTTCATCGGTTACTCATAGAAAATATTCCAGATTCCAAGTATGTCAAGAATGCATTTATTCTTCA 2612
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2613 GGGTCCAAAATATAAATGGATTTGTGCTACAGAAATAGAGGATGATAAGTTCCTATGGCTGTCAGTACTTCGAA 2686
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2687 ATGCAATCAAAAGCAGTATGGAGAAG 2712
Sbjct 1810 -------------------------- 1809
