Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05771
- Subject:
- NR_027672.2
- Aligned Length:
- 4558
- Identities:
- 1472
- Gaps:
- 3015
Alignment
Query 1 ATGGATATAGAAGATGAAGAAAACATGAGTTCCAGCAGCACTGATGTGAAGGAAAACCGCAATCTGGACAACGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTCCCCCAAGGATGGCAGCACACCTG----GGCC-TGGCGAGGGCTCTCAGCTCTCCAATGGGGGTGGTGGTGG 143
|| ||| .||| |||| |||||..||| ||.||.||.||.||
Sbjct 1 ----------GA-GGC------GCTGAGGCGGCCGTGGCGGCGGC---------------GGCGGCGGCGGCGG 42
Query 144 CCCCGGCAG-AAAGCGGCCCCTGGAGGAGGGCAGCAATGGCCACTCCAAGTACCGCCTGAAGAAAAG-GAGGAA 215
|..||||.| .|||||||| |||..|||.||...|| |||| |..|||| | ||||
Sbjct 43 CAGCGGCGGCCAAGCGGCC-----AGGTTGGCGGCCGGGG---CTCC--GGGCCGC----------GCGAGG-- 94
Query 216 AACACCAGGGCCCGTCCTCCCCAAGAACGCC-CTGATGCAGCTG---------AATGAGATCAAGCCTGGTTTG 279
|||.|||| ||||| | ||.|||| ||.||| |
Sbjct 95 ----CCACGGCC--------------ACGCCGC----GCCGCTGCGCACAACCAACGAG--------------G 132
Query 280 CAGTACACACTCCTGTC-CCAGACTG-GGCC----CGT---GCACGCGCCTTTGTTTGTCATGTCTGTGGAGGT 344
|||..|.| |.||.|.| |.|||||| |||| ||| ||.|||| ||.||||
Sbjct 133 CAGAGCGC-CGCCCGGCGCGAGACTGCGGCCGAAGCGTGGGGCGCGCG-----------------TGCGGAG-- 186
Query 345 GAATGGCCAGGTTTTTGAGG-GCTCTGGTCCCACAAAGAAAAAGGCAAAACTCCATGCTGCTGAGAAGGCCTTG 417
|.||||| .|.|| || ||| |||.||||||| |
Sbjct 187 ----GACCAGG----CGCGGCGC--------------------GGC---------TGCGGCTGAGA-------G 216
Query 418 AGGTCTTTCGTTCAGTTTCCTAATGCCTCTGAGGCCCACCTGGCCATGGGGAGGACCCTGTCTGTCAACACGGA 491
.|| .||||.|.||| |||| |||||.|||
Sbjct 217 TGG--------------------AGCCTTTCAGG-----CTGG-CATGGAGAG--------------------- 243
Query 492 CTTCA----CATCTGACCAGGCCGACTTCCCTGACACGCTCTTCAATGGTTTTGAAACTCCTGACAAG-GCGGA 560
|||.| ||.|||| ||| .|||||.|| .|.|||| |||||
Sbjct 244 CTTAAGGGGCAACTGA--AGG----------AGACACACT---------------------GGCCAAGCGCGGA 284
Query 561 GCCTCCCTTTTACGTGGGCTCCAATGGGGATGACTCCTTCAGTTCCAGCGGGGA-CCTCAGCTTGTCTGCTTCC 633
| ||.| ||| |.|||||| |||.||.|.|| .||| |||
Sbjct 285 G------TTCT------GCT--------------TACTTCAG-TCCTGCTGAGATACTC------TCT------ 319
Query 634 CCGGTGCCTGCCAGCCTAGCCCAGCCTCCTCTCCCTGCCTTACCACCATTCCCACCCCCGAGTGGGAAGAATCC 707
||| |||.|||.| |||
Sbjct 320 -----------CAG------------TCCGCTCGC------ACC------------------------------ 334
Query 708 CGTGATGATCTTGAACGAA-CTGCGCCCAGGACTCAAGTATGACTTCCTCTCCGAGAGCGGGG---AGAGCCAT 777
|||.||| |||| ||| ||| |||||
Sbjct 335 ------------GAAGGAAGCTGC-------------------CTT--------------GGGATCAGAGC--- 360
Query 778 GCCAAGAGCTTCGTCATGTCTGTGGTCGTGGATGGTCAGTTCTTTGAAGGCTCGGGGAGAAA-----CAAGA-A 845
||| ||| ||.||| ||||| ||||| |
Sbjct 361 ----AGA-------CAT-----------------------------AAAGCT-----AGAAAAATTTCAAGACA 389
Query 846 GCTTGCCAAGGCCCGGGCTGCGCAGTCTGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGCCATCTC 919
| || .|||||| ||||||.| || |||..|| |||
Sbjct 390 G------AA------------ACAGTCT-------CCGCCAGT---------CA--------AGAAACC--CTC 419
Query 920 GCCAGCCTATTCCCAGTGAGGGTCTTCAGCTGCATTTACCGCAG---------------GTTTTAGCTGACGCT 978
...||..|.||.||| ||.||.|| |.|| |||||||||||||||
Sbjct 420 AAAAGTATTTTGCCA---------------TGGATATA--GAAGATGAAGAAAACATGAGTTTTAGCTGACGCT 476
Query 979 GTCTCACGCCTGGTCCTGGGTAAGTTTGGTGACCTGACCGACAACTTCTCCTCCCCTCACGCTCGCAGAAAAGT 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 GTCTCACGCCTGGTCCTGGGTAAGTTTGGTGACCTGACCGACAACTTCTCCTCCCCTCACGCTCGCAGAAAAGT 550
Query 1053 GCTGGCTGGAGTCGTCATGACAACAGGCACAGATGTTAAAGATGCCAAGGTGATAAGTGTTTCTACAGGAACAA 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 551 GCTGGCTGGAGTCGTCATGACAACAGGCACAGATGTTAAAGATGCCAAGGTGATAAGTGTTTCTACAGGAACAA 624
Query 1127 AATGTATTAATGGTGAATACATGAGTGATCGTGGCCTTGCATTAAATGACTGCCATGCAGAAATAATATCTCGG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 AATGTATTAATGGTGAATACATGAGTGATCGTGGCCTTGCATTAAATGACTGCCATGCAGAAATAATATCTCGG 698
Query 1201 AGATCCTTGCTCAGATTTCTTTATACACAACTTGAGCTTTACTTAAATAACAAAGATGATCAAAAAAGATCCAT 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 699 AGATCCTTGCTCAGATTTCTTTATACACAACTTGAGCTTTACTTAAATAACAAAGATGATCAAAAAAGATCCAT 772
Query 1275 CTTTCAGAAATCAGAGCGAGGGGGGTTTAGGCTGAAGGAGAATGTCCAGTTTCATCTGTACATCAGCACCTCTC 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 CTTTCAGAAATCAGAGCGAGGGGGGTTTAGGCTGAAGGAGAATGTCCAGTTTCATCTGTACATCAGCACCTCTC 846
Query 1349 CCTGTGGAGATGCCAGAATCTTCTCACCACATGAGCCAATCCTGGAAGAACCAGCAGATAGACACCCAAATCGT 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 CCTGTGGAGATGCCAGAATCTTCTCACCACATGAGCCAATCCTGGAAGAACCAGCAGATAGACACCCAAATCGT 920
Query 1423 AAAGCAAGAGGACAGCTACGGACCAAAATAGAGTCTGGTGAGGGGACGATTCCAGTGCGCTCCAATGCGAGCAT 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 921 AAAGCAAGAGGACAGCTACGGACCAAAATAGAGTCTGGTGAGGGGACGATTCCAGTGCGCTCCAATGCGAGCAT 994
Query 1497 CCAAACGTGGGACGGGGTGCTGCAAGGGGAGCGGCTGCTCACCATGTCCTGCAGTGACAAGATTGCACGCTGGA 1570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 995 CCAAACGTGGGACGGGGTGCTGCAAGGGGAGCGGCTGCTCACCATGTCCTGCAGTGACAAGATTGCACGCTGGA 1068
Query 1571 ACGTGGTGGGCATCCAGGGATCCCTGCTCAGCATTTTCGTGGAGCCCATTTACTTCTCGAGCATCATCCTGGGC 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 ACGTGGTGGGCATCCAGGGATCCCTGCTCAGCATTTTCGTGGAGCCCATTTACTTCTCGAGCATCATCCTGGGC 1142
Query 1645 AGCCTTTACCACGGGGACCACCTTTCCAGGGCCATGTACCAGCGGATCTCCAACATAGAGGACCTGCCACCTCT 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143 AGCCTTTACCACGGGGACCACCTTTCCAGGGCCATGTACCAGCGGATCTCCAACATAGAGGACCTGCCACCTCT 1216
Query 1719 CTACACCCTCAACAAGCCTTTGCTCAGTGGCATCAGCAATGCAGAAGCACGGCAGCCAGGGAAGGCCCCCAACT 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1217 CTACACCCTCAACAAGCCTTTGCTCAGTGGCATCAGCAATGCAGAAGCACGGCAGCCAGGGAAGGCCCCCAACT 1290
Query 1793 TCAGTGTCAACTGGACGGTAGGCGACTCCGCTATTGAGGTCATCAACGCCACGACTGGGAAGGATGAGCTGGGC 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1291 TCAGTGTCAACTGGACGGTAGGCGACTCCGCTATTGAGGTCATCAACGCCACGACTGGGAAGGATGAGCTGGGC 1364
Query 1867 CGCGCGTCCCGCCTGTGTAAGCACGCGTTGTACTGTCGCTGGATGCGTGTGCACGGCAAGGTTCCCTCCCACTT 1940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1365 CGCGCGTCCCGCCTGTGTAAGCACGCGTTGTACTGTCGCTGGATGCGTGTGCACGGCAAGGTTCCCTCCCACTT 1438
Query 1941 ACTACGCTCCAAGATTACCAAACCCAACGTGTACCATGAGTCCAAGCTGGCGGCAAAGGAGTACCAGGCCGCCA 2014
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1439 ACTACGCTCCAAGATTACCAAGCCCAACGTGTACCATGAGTCCAAGCTGGCGGCAAAGGAGTACCAGGCCGCCA 1512
Query 2015 AGGCGCGTCTGTTCACAGCCTTCATCAAGGCGGGGCTGGGGGCCTGGGTGGAGAAGCCCACCGAGCAGGACCAG 2088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1513 AGGCGCGTCTGTTCACAGCCTTCATCAAGGCGGGGCTGGGGGCCTGGGTGGAGAAGCCCACCGAGCAGGACCAG 1586
Query 2089 TTCTCACTCACGCCC----------------------------------------------------------- 2103
|||||||||||||||
Sbjct 1587 TTCTCACTCACGCCCTGACCCGGGCAGACATGATGGGGGGTGCAGGGGGCTGTGGGCATCCAGCGTCATCCTCC 1660
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 1661 AGAACCTCACATCTGAACTGGGGGCAGGTGCATACCTTGGGGAGGGAGTAGGGGGACACGGGGGACCACCAGGT 1734
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 1735 GTCCACGGTTGTCCCCAGCATCTCACATCAGACCTGGGGCAGGTGCGCAGTGTGGGGAGGGGATGGGGTGCGTC 1808
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 1809 AGGGCCCAGCATCGCCGCCTGGCATCTCTCTGCCGCAGCATTTCCCCTTCTGAACCGTCCAGTGACTGCTTTCA 1882
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 1883 ATCTCGGTTTACGTTTAGAAATTGAGTTCTACTGAGTAGGGCTTCCTTAAGTTTAGGAAAATAGAAATTACTTT 1956
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 1957 GTGTGAAATTCTTGAATAAATAATTTATTCAGAGCTAGGAATGTGGTTTATAAAATAGGAAGTAATTGTGTCAG 2030
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2031 GTCACTTTTATGCCACATTATTTTAATTGCAAAAAAGCATCTATATATGGAGGAGGGTGGGAAAATAGAGGTAG 2104
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2105 GAAATAGTAGCCTAAAGGAAATCGCCACACGTCTGTCTAAACTTAGGTCTCTTTTCTCCGTAGGTACCTCCCTG 2178
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2179 GGTAGTTCCACACACTAGGTTGTAACAGTCTCTCCCTGAGGAGCAGACTCCCAGCATGGTGTAGCGTGGCCCTG 2252
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2253 TCATGCACATGGGGTCCCGCAGCAGTGACTGTGTGTCCTGCAGAGGCGTGACCCAGGCCCCTGTAGCCCTCAGC 2326
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2327 CTCCTCTAGAAGCTTCTGTACTCCTTGTAGGATCAGATCATGGAAAACTTTTCTCAGTTTACTTCTAAGTAATC 2400
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2401 ACAGATAATACATGGCCAGTAATCCCAGGCTGGCCATTCATTCAGGTTTTTTAAAGGATATTTAACTTTTATGG 2474
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2475 ACTAGAAGGAATCACGAGGGCTACTGCACAATACATGGCCTAAGTTCCCTCTGTTCCTTCCTCTGAATCGAATG 2548
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2549 GATGTGGGTGACCGCCCGAAGGCCTTCACAGGATGGAAGTAGAATGATTTCAGTAGATACTCATTCTTGGAAAA 2622
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2623 TGCCATAGTTTTAAATTATTGTTTCCAGCTTTATCAAAGACATGTTTGAAAAATAAAAAGCATCCAAGTGAGAG 2696
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2697 CTGGTGAGACCACGTGCTGCTGGCGTAGTGTAGGCCAGACATTGACAGTCCTGACGGGAGCTCAGGGCTGCCCA 2770
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2771 GCGCCCAGCGTGCACGGGACGGCCCCACGACAGAGGGAGTCAGCCCGGGAGGTCAGGAGCGCGGCGGGCGAGGG 2844
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2845 CCCTGTGTGGACCACCTCCACCAAGCTCAGAGATTTGCACCAGGTGCCTTGTTGCCTCCGCTCAGGATGAAAGA 2918
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2919 GGAGCTGAGAGAAGTGCTCTGCCTGCCAGTGCAGTGCCCAGCTCCAAGGCTCTAGAGGGTGTTCAGGTACACTG 2992
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2993 AGGAGGGGACGGCTCCGTCTTCACATTGTGCACAGATCTGAGGATGGGATTAGCGAAGCTGTGGAGACTGCACA 3066
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3067 TCCGGACCTGCCCATGTCTCAAAACAAACACATGTACAGTGGCTCTTTTTCCTTCTCAAACACTTTACCCCAGA 3140
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3141 AGCAGGTGGTCTGCCCCAGGCATAAAGAAGGAAAATTGGCCATCTTTCCCACCTCTAAATTCTGTAAAATTATA 3214
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3215 GACTTGCTCAAAAGATTCCTTTTTATCATCCCCACGCTGTGTAAGTGGAAAGGGCATTGTGTTCCGTGTGTGTC 3288
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3289 CAGTTTACAGCGTCTCTGCCCCCTAGCGTGTTTTGTGACAATCTCCCTGGGTGAGGAGTGGGTGCACCCAGCCC 3362
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3363 CGAGGCCAGTGGTTGCTCGGGGCCTTCCGTGTGAGTTCTAGTGTTCACTTGATGCCGGGGAATAGAATTAGAGA 3436
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3437 AAACTCTGACCTGCCGGGTTCCAGGGACTGGTGGAGGTGGATGGCAGGTCCGACTCGACCATGACTTAGTTGTA 3510
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3511 AGGGTGTGTCGGCTTTTTCAGTCTCATGTGAAAATCCTCCTGTCTCTGGCAGCACTGTCTGCACTTTCTTGTTT 3584
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3585 ACTGTTTGAAGGGACGAGTACCAAGCCACAAGAACACTTCTTTTGGCCACAGCATAAGCTGATGGTATGTAAGG 3658
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3659 AACCGATGGGCCATTAAACATGAACTGAACGGTTAAAAGCACAGTCTATGGAACGCTAATGGAGTCAGCCCCTA 3732
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3733 AAGCTGTTTGCTTTTTCAGGCTTTGGATTACATGCTTTTAATTTGATTTTAGAATCTGGACACTTTCTATGAAT 3806
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3807 GTAATTCGGCTGAGAAACATGTTGCTGAGATGCAATCCTCAGTGTTCTCTGTATGTAAATCTGTGTATACACCA 3880
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3881 CACGTTACAACTGCATGAGCTTCCTCTCGCACAAGACCAGCTGGAACTGAGCATGAGACGCTGTCAAATACAGA 3954
Query 2104 -------------------------------------------- 2103
Sbjct 3955 CAAAGGATTTGAGATGTTCTCAATAAAAAGAAAATGTTTCACTA 3998
