Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05771
- Subject:
- NR_073200.2
- Aligned Length:
- 5053
- Identities:
- 2101
- Gaps:
- 2950
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGCGCTGAGGCGGCCGTGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCCAAGCGGCCAGGTTGGCGGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCTCCGGGCCGCGCGAGGCCACGGCCACGCCGCGCCGCTGCGCACAACCAACGAGGCAGAGCGCCGCCCGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGAGACTGCGGCCGAAGCGTGGGGCGCGCGTGCGGAGGACCAGGCGCGGCGCGGCTGCGGCTGAGAGTGGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTTCAGGCTGGCATGGAGAGCTTAAGGGGCAACTGAAGGAGACACACTGGCCAAGCGCGGAGTTCTGCTTACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGTCCTGCTGAGATACTCTCTCAGTCCGCTCGCACCGAAGGAAGCTGCCTTGGGATCAGAGCAGACATAAAG 370
Query 1 ---------------------------------------------------------------ATGGATATAGA 11
|||||||||||
Sbjct 371 CTAGAAAAATTTCAAGACAGAAACAGTCTCCGCCAGTCAAGAAACCCTCAAAAGTATTTTGCCATGGATATAGA 444
Query 12 AGATGAAGAAAACATGAGTTCCAGCAGCACTGATGTGAAGGAAAACCGCAATCTGGACAACGTGTCCCCCAAGG 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGATGAAGAAAACATGAGTTCCAGCAGCACTGATGTGAAGGAAAACCGCAATCTGGACAACGTGTCCCCCAAGG 518
Query 86 ATGGCAGCACACCTGGGCCTGGCGAGGGCTCTCAGCTCTCCAATGGGGGTGGTGGTGGCCCCGGCAGAAAGCGG 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATGGCAGCACACCTGGGCCTGGCGAGGGCTCTCAGCTCTCCAATGGGGGTGGTGGTGGCCCCGGCAGAAAGCGG 592
Query 160 CCCCTGGAGGAGGGCAGCAATGGCCACTCCAAGTACCGCCTGAAGAAAAGGAGGAAAACACCAGGGCCCGTCCT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCCCTGGAGGAGGGCAGCAATGGCCACTCCAAGTACCGCCTGAAGAAAAGGAGGAAAACACCAGGGCCCGTCCT 666
Query 234 CCCCAAGAACGCCCTGATGCAGCTGAATGAGATCAAGCCTGGTTTGCAGTACACACTCCTGTCCCAGACTGGGC 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCCAAGAACGCCCTGATGCAGCTGAATGAGATCAAGCCTGGTTTGCAGTACACACTCCTGTCCCAGACTGGGC 740
Query 308 CCGTGCACGCGCCTTTGTTTGTCATGTCTGTGGAGGTGAATGGCCAGGTTTTTGAGGGCTCTGGTCCCACAAAG 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCGTGCACGCGCCTTTGTTTGTCATGTCTGTGGAGGTGAATGGCCAGGTTTTTGAGGGCTCTGGTCCCACAAAG 814
Query 382 AAAAAGGCAAAACTCCATGCTGCTGAGAAGGCCTTGAGGTCTTTCGTTCAGTTTCCTAATGCCTCTGAGGCCCA 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAAAAGGCAAAACTCCATGCTGCTGAGAAGGCCTTGAGGTCTTTCGTTCAGTTTCCTAATGCCTCTGAGGCCCA 888
Query 456 CCTGGCCATGGGGAGGACCCTGTCTGTCAACACGGACTTCACATCTGACCAGGCCGACTTCCCTGACACGCTCT 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCTGGCCATGGGGAGGACCCTGTCTGTCAACACGGACTTCACATCTGACCAGGCCGACTTCCCTGACACGCTCT 962
Query 530 TCAATGGTTTTGAAACTCCTGACAAGGCGGAGCCTCCCTTTTACGTGGGCTCCAATGGGGATGACTCCTTCAGT 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCAATGGTTTTGAAACTCCTGACAAGGCGGAGCCTCCCTTTTACGTGGGCTCCAATGGGGATGACTCCTTCAGT 1036
Query 604 TCCAGCGGGGACCTCAGCTTGTCTGCTTCCCCGGTGCCTGCCAGCCTAGCCCAGCCTCCTCTCCCTGCCTTACC 677
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1037 TCCAGCGGGGACCTCAGCTTGTCTGCTTCCCCGGTGCCTGCCAGCCTAGCCCAGCCTCCTCTCCCTGTCTTACC 1110
Query 678 ACCATTCCCACCCCCGAGTGGGAAGAATCCCGTGATGATCTTGAACGAACTGCGCCCAGGACTCAAGTATGACT 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACCATTCCCACCCCCGAGTGGGAAGAATCCCGTGATGATCTTGAACGAACTGCGCCCAGGACTCAAGTATGACT 1184
Query 752 TCCTCTCCGAGAGCGGGGAGAGCCATGCCAAGAGCTTCGTCATGTCTGTGGTCGTGGATGGTCAGTTCTTTGAA 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCTCTCCGAGAGCGGGGAGAGCCATGCCAAGAGCTTCGTCATGTCTGTGGTCGTGGATGGTCAGTTCTTTGAA 1258
Query 826 GGCTCGGGGAGAAACAAGAAGCTTGCCAAGGCCCGGGCTGCGCAGTCTGCCCTGGCCGCCATTTTTAACTTGCA 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGCTCGGGGAGAAACAAGAAGCTTGCCAAGGCCCGGGCTGCGCAGTCTGCCCTGGCCGCCATTTTTAACTTGCA 1332
Query 900 CTTGGATCAGACGCCATCTCGCCAGCCTATTCCCAGTGAGGGTCTTCAGCTGCATTTACCGCAGGTTTTAGCTG 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTTGGATCAGACGCCATCTCGCCAGCCTATTCCCAGTGAGGGTCTTCAGCTGCATTTACCGCAGGTTTTAGCTG 1406
Query 974 ACGCTGTCTCACGCCTGGTCCTGGGTAAGTTTGGTGACCTGACCGACAACTTCTCCTCCCCTCACGCTCGCAGA 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACGCTGTCTCACGCCTGGTCCTGGGTAAGTTTGGTGACCTGACCGACAACTTCTCCTCCCCTCACGCTCGCAGA 1480
Query 1048 AAAGTGCTGGCTGGAGTCGTCATGACAACAGGCACAGATGTTAAAGATGCCAAGGTGATAAGTGTTTCTACAGG 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAAGTGCTGGCTGGAGTCGTCATGACAACAGGCACAGATGTTAAAGATGCCAAGGTGATAAGTGTTTCTACAGG 1554
Query 1122 AACAAAATGTATTAATGGTGAATACATGAGTGATCGTGGCCTTGCATTAAATGACTGCCATGCAGAAATAATAT 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AACAAAATGTATTAATGGTGAATACATGAGTGATCGTGGCCTTGCATTAAATGACTGCCATGCAGAAATAATAT 1628
Query 1196 CTCGGAGATCCTTGCTCAGATTTCTTTATACACAACTTGAGCTTTACTTAAATAACAAAGATGATCAAAAAAGA 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CTCGGAGATCCTTGCTCAGATTTCTTTATACACAACTTGAGCTTTACTTAAATAACAAAGATGATCAAAAAAGA 1702
Query 1270 TCCATCTTTCAGAAATCAGAGCGAGGGGGGTTTAGGCTGAAGGAGAATGTCCAGTTTCATCTGTACATCAGCAC 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCCATCTTTCAGAAATCAGAGCGAGGGGGGTTTAGGCTGAAGGAGAATGTCCAGTTTCATCTGTACATCAGCAC 1776
Query 1344 CTCTCCCTGTGGAGATGCCAGAATCTTCTCACCACATGAGCCAATCCTGGA----------------------- 1394
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTCTCCCTGTGGAGATGCCAGAATCTTCTCACCACATGAGCCAATCCTGGAAGGGTCTCGCTCTTACACCCAGG 1850
Query 1395 -------------------------------------------------------------------------- 1394
Sbjct 1851 CTGGAGTGCAGTGGTGCAATCATGGCTCACTGCAGCCTCGACCTCCTGGGCTCTTAAGCGATCCTTCCACCTCA 1924
Query 1395 -----------------------AGAACCAGCAGATAGACACCCAAATCGTAAAGCAAGAGGACAGCTACGGAC 1445
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ACCTTCCAAGGAGCTGGGACTACAGAACCAGCAGATAGACACCCAAATCGTAAAGCAAGAGGACAGCTACGGAC 1998
Query 1446 CAAAATAGAGTCTGGTGAGGGGACGATTCCAGTGCGCTCCAATGCGAGCATCCAAACGTGGGACGGGGTGCTGC 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CAAAATAGAGTCTGGTGAGGGGACGATTCCAGTGCGCTCCAATGCGAGCATCCAAACGTGGGACGGGGTGCTGC 2072
Query 1520 AAGGGGAGCGGCTGCTCACCATGTCCTGCAGTGACAAGATTGCACGCTGGAACGTGGTGGGCATCCAGGGATCC 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AAGGGGAGCGGCTGCTCACCATGTCCTGCAGTGACAAGATTGCACGCTGGAACGTGGTGGGCATCCAGGGATCC 2146
Query 1594 CTGCTCAGCATTTTCGTGGAGCCCATTTACTTCTCGAGCATCATCCTGGGCAGCCTTTACCACGGGGACCACCT 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CTGCTCAGCATTTTCGTGGAGCCCATTTACTTCTCGAGCATCATCCTGGGCAGCCTTTACCACGGGGACCACCT 2220
Query 1668 TTCCAGGGCCATGTACCAGCGGATCTCCAACATAGAGGACCTGCCACCTCTCTACACCCTCAACAAGCCTTTGC 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TTCCAGGGCCATGTACCAGCGGATCTCCAACATAGAGGACCTGCCACCTCTCTACACCCTCAACAAGCCTTTGC 2294
Query 1742 TCAGTGGCATCAGCAATGCAGAAGCACGGCAGCCAGGGAAGGCCCCCAACTTCAGTGTCAACTGGACGGTAGGC 1815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TCAGTGGCATCAGCAATGCAGAAGCACGGCAGCCAGGGAAGGCCCCCAACTTCAGTGTCAACTGGACGGTAGGC 2368
Query 1816 GACTCCGCTATTGAGGTCATCAACGCCACGACTGGGAAGGATGAGCTGGGCCGCGCGTCCCGCCTGTGTAAGCA 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GACTCCGCTATTGAGGTCATCAACGCCACGACTGGGAAGGATGAGCTGGGCCGCGCGTCCCGCCTGTGTAAGCA 2442
Query 1890 CGCGTTGTACTGTCGCTGGATGCGTGTGCACGGCAAGGTTCCCTCCCACTTACTACGCTCCAAGATTACCAAAC 1963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 2443 CGCGTTGTACTGTCGCTGGATGCGTGTGCACGGCAAGGTTCCCTCCCACTTACTACGCTCCAAGATTACCAAGC 2516
Query 1964 CCAACGTGTACCATGAGTCCAAGCTGGCGGCAAAGGAGTACCAGGCCGCCAAGGCGCGTCTGTTCACAGCCTTC 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CCAACGTGTACCATGAGTCCAAGCTGGCGGCAAAGGAGTACCAGGCCGCCAAGGCGCGTCTGTTCACAGCCTTC 2590
Query 2038 ATCAAGGCGGGGCTGGGGGCCTGGGTGGAGAAGCCCACCGAGCAGGACCAGTTCTCACTCACGCCC-------- 2103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 ATCAAGGCGGGGCTGGGGGCCTGGGTGGAGAAGCCCACCGAGCAGGACCAGTTCTCACTCACGCCCTGACCCGG 2664
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2665 GCAGACATGATGGGGGGTGCAGGGGGCTGTGGGCATCCAGCGTCATCCTCCAGAACCTCACATCTGAACTGGGG 2738
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2739 GCAGGTGCATACCTTGGGGAGGGAGTAGGGGGACACGGGGGACCACCAGGTGTCCACGGTTGTCCCCAGCATCT 2812
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2813 CACATCAGACCTGGGGCAGGTGCGCAGTGTGGGGAGGGGATGGGGTGCGTCAGGGCCCAGCATCGCCGCCTGGC 2886
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2887 ATCTCTCTGCCGCAGCATTTCCCCTTCTGAACCGTCCAGTGACTGCTTTCAATCTCGGTTTACGTTTAGAAATT 2960
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2961 GAGTTCTACTGAGTAGGGCTTCCTTAAGTTTAGGAAAATAGAAATTACTTTGTGTGAAATTCTTGAATAAATAA 3034
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3035 TTTATTCAGAGCTAGGAATGTGGTTTATAAAATAGGAAGTAATTGTGTCAGGTCACTTTTATGCCACATTATTT 3108
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3109 TAATTGCAAAAAAGCATCTATATATGGAGGAGGGTGGGAAAATAGAGGTAGGAAATAGTAGCCTAAAGGAAATC 3182
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3183 GCCACACGTCTGTCTAAACTTAGGTCTCTTTTCTCCGTAGGTACCTCCCTGGGTAGTTCCACACACTAGGTTGT 3256
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3257 AACAGTCTCTCCCTGAGGAGCAGACTCCCAGCATGGTGTAGCGTGGCCCTGTCATGCACATGGGGTCCCGCAGC 3330
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3331 AGTGACTGTGTGTCCTGCAGAGGCGTGACCCAGGCCCCTGTAGCCCTCAGCCTCCTCTAGAAGCTTCTGTACTC 3404
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3405 CTTGTAGGATCAGATCATGGAAAACTTTTCTCAGTTTACTTCTAAGTAATCACAGATAATACATGGCCAGTAAT 3478
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3479 CCCAGGCTGGCCATTCATTCAGGTTTTTTAAAGGATATTTAACTTTTATGGACTAGAAGGAATCACGAGGGCTA 3552
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3553 CTGCACAATACATGGCCTAAGTTCCCTCTGTTCCTTCCTCTGAATCGAATGGATGTGGGTGACCGCCCGAAGGC 3626
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3627 CTTCACAGGATGGAAGTAGAATGATTTCAGTAGATACTCATTCTTGGAAAATGCCATAGTTTTAAATTATTGTT 3700
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3701 TCCAGCTTTATCAAAGACATGTTTGAAAAATAAAAAGCATCCAAGTGAGAGCTGGTGAGACCACGTGCTGCTGG 3774
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3775 CGTAGTGTAGGCCAGACATTGACAGTCCTGACGGGAGCTCAGGGCTGCCCAGCGCCCAGCGTGCACGGGACGGC 3848
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3849 CCCACGACAGAGGGAGTCAGCCCGGGAGGTCAGGAGCGCGGCGGGCGAGGGCCCTGTGTGGACCACCTCCACCA 3922
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3923 AGCTCAGAGATTTGCACCAGGTGCCTTGTTGCCTCCGCTCAGGATGAAAGAGGAGCTGAGAGAAGTGCTCTGCC 3996
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3997 TGCCAGTGCAGTGCCCAGCTCCAAGGCTCTAGAGGGTGTTCAGGTACACTGAGGAGGGGACGGCTCCGTCTTCA 4070
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4071 CATTGTGCACAGATCTGAGGATGGGATTAGCGAAGCTGTGGAGACTGCACATCCGGACCTGCCCATGTCTCAAA 4144
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4145 ACAAACACATGTACAGTGGCTCTTTTTCCTTCTCAAACACTTTACCCCAGAAGCAGGTGGTCTGCCCCAGGCAT 4218
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4219 AAAGAAGGAAAATTGGCCATCTTTCCCACCTCTAAATTCTGTAAAATTATAGACTTGCTCAAAAGATTCCTTTT 4292
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4293 TATCATCCCCACGCTGTGTAAGTGGAAAGGGCATTGTGTTCCGTGTGTGTCCAGTTTACAGCGTCTCTGCCCCC 4366
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4367 TAGCGTGTTTTGTGACAATCTCCCTGGGTGAGGAGTGGGTGCACCCAGCCCCGAGGCCAGTGGTTGCTCGGGGC 4440
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4441 CTTCCGTGTGAGTTCTAGTGTTCACTTGATGCCGGGGAATAGAATTAGAGAAAACTCTGACCTGCCGGGTTCCA 4514
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4515 GGGACTGGTGGAGGTGGATGGCAGGTCCGACTCGACCATGACTTAGTTGTAAGGGTGTGTCGGCTTTTTCAGTC 4588
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4589 TCATGTGAAAATCCTCCTGTCTCTGGCAGCACTGTCTGCACTTTCTTGTTTACTGTTTGAAGGGACGAGTACCA 4662
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4663 AGCCACAAGAACACTTCTTTTGGCCACAGCATAAGCTGATGGTATGTAAGGAACCGATGGGCCATTAAACATGA 4736
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4737 ACTGAACGGTTAAAAGCACAGTCTATGGAACGCTAATGGAGTCAGCCCCTAAAGCTGTTTGCTTTTTCAGGCTT 4810
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4811 TGGATTACATGCTTTTAATTTGATTTTAGAATCTGGACACTTTCTATGAATGTAATTCGGCTGAGAAACATGTT 4884
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4885 GCTGAGATGCAATCCTCAGTGTTCTCTGTATGTAAATCTGTGTATACACCACACGTTACAACTGCATGAGCTTC 4958
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4959 CTCTCGCACAAGACCAGCTGGAACTGAGCATGAGACGCTGTCAAATACAGACAAAGGATTTGAGATGTTCTCAA 5032
Query 2104 --------------------- 2103
Sbjct 5033 TAAAAAGAAAATGTTTCACTA 5053
