Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05828
- Subject:
- XM_011515342.2
- Aligned Length:
- 2068
- Identities:
- 889
- Gaps:
- 1178
Alignment
Query 1 ATGCAGTCCCCCTGGAAAATCCTTACGGTGGCGCCTCTATTCTTGCTCCTGTCTCTTCAGTCCTCAGCCTCTCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGCACACCTGTGTAGGGTGTGTGCTGGTGGTGTCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TAATAGAACAGCTTGCTCAAGTTCACAACTCGACGGTCCAGGCCTCGATGGAGAGACTGTGCAGCTACCTGCCT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAAAACTGTTCTTGAAAACCACCTGCTATTTAGTCATTGACAAGTTTGGATCAGACATCATAAAACTGCTTAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CGCAGATATGAATGCTGATGTGGTATGTCACACTCTGGAGTTTTGTAAACAGAACACTGGCCAACCATTGTGTC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ATCTCTACCCTCTTCCCAAGGAGACATGGAAATTTACACTACAGAAGGCAAGACAAATTGTCAAGAAGTCCCCG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ATTCTGAAATATTCTAGAAGTGGTTCTGACATTTGTTCACTCCCGGTTTTGGCCAAGATCTGCCAGAAAATTAA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ATTAGCTATGGAACAGTCTGTGCCATTCAAAGATGTGGATTCAGACAAATACAGCGTTTTCCCAACACTGCGGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCTATCACTGGCGGGGGAGAGACTGTAATGACAGCGACGAGTCAGTGTACCCAGGTAGAAGGCCGAACAACTGG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GATGTCCATCAGGATTCAAACTGTAATGGCATTTGGGGTGTCGATCCAAAAGATGGAGTTCCATATGAGAAGAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 ATTCTGTGAAGGTTCACAGCCCAGGGGAATCATTTTGCTGGGAGACTCAGCTGGGGCTCATTTTCACATCTCTC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CTGAATGGATCACAGCGTCGCAGATGTCTTT----GAACTCTTTCATCAATCTACCAACAGCCCTTACCAACGA 884
||.|||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1 --------ATGACAG------AGA-------AAAAGAACTCTTTCATCAATCTACCAACAGCCCTTACCAACGA 53
Query 885 GCTTGACTGGCCCCAACTCTCTGGTGCTACAGGATTTCTGGACTCCACTGTTGGAATTAAAGAAAAATCTATTT 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 54 GCTTGACTGGCCCCAACTCTCTGGTGCTACAGGATTTCTGGACTCCACTGTTGGAATTAAAGAAAAATCTATTT 127
Query 959 ACCTTCGCTTATGGAAAAGAAACCACTGTAATCACAGGGACTACCAGAATATTTCAAGAAATGGTGCATCTTCC 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 128 ACCTTCGCTTATGGAAAAGAAACCACTGTAATCACAGGGACTACCAGAATATTTCAAGAAATGGTGCATCTTCC 201
Query 1033 CGAAACCTGAAGAAATTTATAGAAAGCTTGTCTAGAAACAAGGTGTTGGACTATCCCGCCATCGTTATATATGC 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 CGAAACCTGAAGAAATTTATAGAAAGCTTGTCTAGAAACAAGGTGTTGGACTATCCCGCCATCGTTATATATGC 275
Query 1107 CATGATTGGAAATGATGTCTGCAGTGGGAAGAGTGACCCAGTCCCAGCCATGACCACTCCTGAGAAACTCTACT 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 276 CATGATTGGAAATGATGTCTGCAGTGGGAAGAGTGACCCAGTCCCAGCCATGACCACTCCTGAGAAACTCTACT 349
Query 1181 CCAACGTCATGCAGACTCTGAAGCATCTAAATTCCCACCTGCCCAATGGCAGCCATGTTATTTTGTATGGCTTA 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 350 CCAACGTCATGCAGACTCTGAAGCATCTAAATTCCCACCTGCCCAATGGCAGCCATGTTATTTTGTATGGCTTA 423
Query 1255 CCAGATGGAACCTTTCTCTGGGATAATTTGCACAACAGATATCATCCTCTCGGCCAGCTAAATAAAGACATGAC 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 424 CCAGATGGAACCTTTCTCTGGGATAATTTGCACAACAGATATCATCCTCTCGGCCAGCTAAATAAAGACATGAC 497
Query 1329 CTATGCGCAGTTGTACTCCTTCCTGAACTGCCTCCAGGTCAGCCCCTGCCACGGCTGGATGTCTTCCAACAAGA 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 498 CTATGCGCAGTTGTACTCCTTCCTGAACTGCCTCCAGGTCAGCCCCTGCCACGGCTGGATGTCTTCCAACAAGA 571
Query 1403 CGTTGCGGACTCTCACTTCAGAGAGAGCAGAGCAACTCTCCAACACACTGAAAAAAATTGCAGCCAGTGAGAAA 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 CGTTGCGGACTCTCACTTCAGAGAGAGCAGAGCAACTCTCCAACACACTGAAAAAAATTGCAGCCAGTGAGAAA 645
Query 1477 TTTACAAACTTCAATCTTTTCTACATGGATTTTGCCTTCCATGAAATCATACAGGAGTGGCAGAAGAGAGGCGG 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 646 TTTACAAACTTCAATCTTTTCTACATGGATTTTGCCTTCCATGAAATCATACAGGAGTGGCAGAAGAGAGGCGG 719
Query 1551 ACAGCCCTGGCAGCTCATCGAGCCCGTGGATGGATTCCACCCCAACGAG------------------------- 1599
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 ACAGCCCTGGCAGCTCATCGAGCCCGTGGATGGATTCCACCCCAACGAGAGAAAGAGCATCCTCCTCAAAGGCA 793
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 794 TATTAATGACAAGCCAGACACTGGACAACCAAGAATGGACCCAGCTAACATCATGGATAAAGGGAAACCTGACA 867
Query 1600 --------------------GTGGCTTTGCTGTTGTTGGCGGATCATTTCTGGAAAAAGGTGCAGCTCCAGTGG 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 868 TGCGACAGCAGAACCAGAGAGTGGCTTTGCTGTTGTTGGCGGATCATTTCTGGAAAAAGGTGCAGCTCCAGTGG 941
Query 1654 CCCCAAATCCTGGGAAAGGAGAATCCGTTCAACCCCCAGATTAAACAGGTGTTTGGAGACCAAGGCGGGCAC-- 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 CCCCAAATCCTGGGAAAGGAGAATCCGTTCAACCCCCAGATTAAACAGGTGTTTGGAGACCAAGGCGGGCACTG 1015
Query 1726 -------------------------------------------------------------------------- 1725
Sbjct 1016 AGCCTCTCAGGAGCATGCACCCCTGGGGAGCACAGGGAGGCAGAGGCTTGGGTAAACTCATTCCACAAACCCTA 1089
Query 1726 -------------------------------------------------------------------------- 1725
Sbjct 1090 TGGGGGCTGCCACGTCACAGGCCCAAAGGACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGA 1163
Query 1726 ---------------------------------------------------------------------- 1725
Sbjct 1164 AGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAA 1233
