Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_05828
- Subject:
- XM_017012105.1
- Aligned Length:
- 2083
- Identities:
- 991
- Gaps:
- 1070
Alignment
Query 1 ATGCAGTCCCCCTGGAAAATCCTTACGGTGGCGCCTCTATTCTTGCTCCTGTCTCTTCAGTCCTCAGCCTCTCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGCACACCTGTGTAGGGTGTGTGCTGGTGGTGTCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TAATAGAACAGCTTGCTCAAGTTCACAACTCGACGGTCCAGGCCTCGATGGAGAGACTGTGCAGCTACCTGCCT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAAAACTGTTCTTGAAAACCACCTGCTATTTAGTCATTGACAAGTTTGGATCAGACATCATAAAACTGCTTAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CGCAGATATGAATGCTGATGTGGTATGTCACACTCTGGAGTTTTGTAAACAGAACACTGGCCAACCATTGTGTC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ATCTCTACCCTCTTCCCAAGGAGACATGGAAATTTACACTACAGAAGGCAAGACAAATTGTCAAGAAGTCCCCG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ATTCTGAAATATTCTAGAAGTGGTTCTGACATTTGTTCACTCCCGGTTTTGGCCAAGATCTGCCAGAAAATTAA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ATTAGCTATGGAACAGTCTGTGCCATTCAAAGATGTGGATTCAGACAAATACAGCGTTTTCCCAACACTGCGGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCTATCACTGGCGGGGGAGAGACTGTAATGACAGCGACGAGTCAGTGTACCCAGGTAG------AAGGCCGAAC 660
|||| |||.| |||.|.||| || ||| |||
Sbjct 1 ---------------------------ATGA----GACCA-----TGTCCACAG--AGCCTGCAAAG---GAA- 32
Query 661 AACTGGGATGT----CCATCAGGATT---CAAACTGTAATGGCATTTGGGGTGTC--GATCCAAAAGATGGAGT 725
|||| || ||| ||| |||.|||| ||.|| .|.|| ||..||| ||.
Sbjct 33 ----GGGA-GTGAAGCCA-----ATTCTGCAACCTGT-----CACTT---ATCTCCAGAATCAA-------AGG 81
Query 726 TCCATATGAGAAGAAATTCTGTGAAGGTTCACAGCCCAGGGGAAT---CATTTTGCTGGGAGACTCAGCTGGGG 796
||| |||||| ||..|||.| |||||| ||.|.| |.|.|.|| ||| |||||
Sbjct 82 TCC-----AGAAGA------GTTGAGGCT----------GGGAATGGCCAGTGT-CAGAGGGA--CAG-TGGGG 130
Query 797 CTCA-TTTTCACATCTCTCCTGAATGGATCACAGCGTCGCAGATGTCTTTGAACTCTTTCATCAATCTACCAAC 869
|||| .|||| ||| ||||..|| .||||||||||||||||||||||||
Sbjct 131 CTCAGCTTTC--------CCT--------------GTCGGGGA------AGAACTCTTTCATCAATCTACCAAC 176
Query 870 AGCCCTTACCAACGAGCTTGACTGGCCCCAACTCTCTGGTGCTACAGGATTTCTGGACTCCACTGTTGGAATTA 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 177 AGCCCTTACCAACGAGCTTGACTGGCCCCAACTCTCTGGTGCTACAGGATTTCTGGACTCCACTGTTGGAATTA 250
Query 944 AAGAAAAATCTATTTACCTTCGCTTATGGAAAAGAAACCACTGTAATCACAGGGACTACCAGAATATTTCAAGA 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 251 AAGAAAAATCTATTTACCTTCGCTTATGGAAAAGAAACCACTGTAATCACAGGGACTACCAGAATATTTCAAGA 324
Query 1018 AATGGTGCATCTTCCCGAAACCTGAAGAAATTTATAGAAAGCTTGTCTAGAAACAAGGTGTTGGACTATCCCGC 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 AATGGTGCATCTTCCCGAAACCTGAAGAAATTTATAGAAAGCTTGTCTAGAAACAAGGTGTTGGACTATCCCGC 398
Query 1092 CATCGTTATATATGCCATGATTGGAAATGATGTCTGCAGTGGGAAGAGTGACCCAGTCCCAGCCATGACCACTC 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 399 CATCGTTATATATGCCATGATTGGAAATGATGTCTGCAGTGGGAAGAGTGACCCAGTCCCAGCCATGACCACTC 472
Query 1166 CTGAGAAACTCTACTCCAACGTCATGCAGACTCTGAAGCATCTAAATTCCCACCTGCCCAATGGCAGCCATGTT 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 473 CTGAGAAACTCTACTCCAACGTCATGCAGACTCTGAAGCATCTAAATTCCCACCTGCCCAATGGCAGCCATGTT 546
Query 1240 ATTTTGTATGGCTTACCAGATGGAACCTTTCTCTGGGATAATTTGCACAACAGATATCATCCTCTCGGCCAGCT 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 ATTTTGTATGGCTTACCAGATGGAACCTTTCTCTGGGATAATTTGCACAACAGATATCATCCTCTCGGCCAGCT 620
Query 1314 AAATAAAGACATGACCTATGCGCAGTTGTACTCCTTCCTGAACTGCCTCCAGGTCAGCCCCTGCCACGGCTGGA 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 621 AAATAAAGACATGACCTATGCGCAGTTGTACTCCTTCCTGAACTGCCTCCAGGTCAGCCCCTGCCACGGCTGGA 694
Query 1388 TGTCTTCCAACAAGACGTTGCGGACTCTCACTTCAGAGAGAGCAGAGCAACTCTCCAACACACTGAAAAAAATT 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 695 TGTCTTCCAACAAGACGTTGCGGACTCTCACTTCAGAGAGAGCAGAGCAACTCTCCAACACACTGAAAAAAATT 768
Query 1462 GCAGCCAGTGAGAAATTTACAAACTTCAATCTTTTCTACATGGATTTTGCCTTCCATGAAATCATACAGGAGTG 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 GCAGCCAGTGAGAAATTTACAAACTTCAATCTTTTCTACATGGATTTTGCCTTCCATGAAATCATACAGGAGTG 842
Query 1536 GCAGAAGAGAGGCGGACAGCCCTGGCAGCTCATCGAGCCCGTGGATGGATTCCACCCCAACGAG---------- 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 GCAGAAGAGAGGCGGACAGCCCTGGCAGCTCATCGAGCCCGTGGATGGATTCCACCCCAACGAGAGAAAGAGCA 916
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 917 TCCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACCAAGAATGGACCCAGCTAACATCATGGATA 990
Query 1600 -----------------------------------GTGGCTTTGCTGTTGTTGGCGGATCATTTCTGGAAAAAG 1638
|||||||||||||||||||||||||||||||||||||||
Sbjct 991 AAGGGAAACCTGACATGCGACAGCAGAACCAGAGAGTGGCTTTGCTGTTGTTGGCGGATCATTTCTGGAAAAAG 1064
Query 1639 GTGCAGCTCCAGTGGCCCCAAATCCTGGGAAAGGAGAATCCGTTCAACCCCCAGATTAAACAGGTGTTTGGAGA 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1065 GTGCAGCTCCAGTGGCCCCAAATCCTGGGAAAGGAGAATCCGTTCAACCCCCAGATTAAACAGGTGTTTGGAGA 1138
Query 1713 CCAAGGCGGGCAC------------------------------------------------------------- 1725
|||||||||||||
Sbjct 1139 CCAAGGCGGGCACTGAGCCTCTCAGGAGCATGCACCCCTGGGGAGCACAGGGAGGCAGAGGCTTGGGTAAACTC 1212
Query 1726 -------------------------------------------------------------------------- 1725
Sbjct 1213 ATTCCACAAACCCTATGGGGGCTGCCACGTCACAGGCCCAAAGGACTCTTCTTCAGCAGCATCTTTGCAAAATG 1286
Query 1726 -------------------------------------------------------------------------- 1725
Sbjct 1287 TCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGC 1360
Query 1726 ----------- 1725
Sbjct 1361 TGTTCCTGAAA 1371
