Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05974
Subject:
XM_005255760.4
Aligned Length:
2405
Identities:
2121
Gaps:
280

Alignment

Query    1  ATGCCAGAACGGCTAGCGGAAATGCTCTTGGATCTCTGGACTCCATTAATAATATTATGGATTACTCTTCCCCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCCAGAACGGCTAGCGGAAATGCTCTTGGATCTCTGGACTCCATTAATAATATTATGGATTACTCTTCCCCC  74

Query   75  TTGCATTTACATGGCTCCGATGAATCAGTCTCAAGTTTTAATGAGTGGATCCCCTTTGGAACTAAACAGTCTGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TTGCATTTACATGGCTCCGATGAATCAGTCTCAAGTTTTAATGAGTGGATCCCCTTTGGAACTAAACAGTCTGG  148

Query  149  GTGAAGAACAGCGAATTTTGAACCGCTCCAAAAGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGAAGAGTTT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GTGAAGAACAGCGAATTTTGAACCGCTCCAAAAGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGAAGAGTTT  222

Query  223  TCTGGACCTGAACCGATTCTTGTTGGCCGGCTACACACAGACCTGGATCCTGGGAGCAAAAAAATCAAGTATAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCTGGACCTGAACCGATTCTTGTTGGCCGGCTACACACAGACCTGGATCCTGGGAGCAAAAAAATCAAGTATAT  296

Query  297  CCTATCAGGTGATGGAGCTGGGACCATATTTCAAATAAATGATGTAACTGGAGATATCCATGCTATAAAAAGAC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCTATCAGGTGATGGAGCTGGGACCATATTTCAAATAAATGATGTAACTGGAGATATCCATGCTATAAAAAGAC  370

Query  371  TTGACCGGGAGGAAAAGGCTGAGTATACCCTAACAGCTCAAGCAGTGGACTGGGAGACAAGCAAACCTCTGGAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTGACCGGGAGGAAAAGGCTGAGTATACCCTAACAGCTCAAGCAGTGGACTGGGAGACAAGCAAACCTCTGGAG  444

Query  445  CCTCCTTCTGAATTTATTATTAAAGTTCAAGACATCAATGACAATGCACCAGAGTTTCTTAATGGACCCTATCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCTCCTTCTGAATTTATTATTAAAGTTCAAGACATCAATGACAATGCACCAGAGTTTCTTAATGGACCCTATCA  518

Query  519  TGCTACTGTGCCAGAAATGTCCATTTTGGGTACATCTGTCACTAACGTCACTGCGACCGACGCTGATGACCCAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGCTACTGTGCCAGAAATGTCCATTTTGGGTACATCTGTCACTAACGTCACTGCGACCGACGCTGATGACCCAG  592

Query  593  TTTATGGAAACAGTGCAAAGTTGGTTTATAGTATATTGGAAGGGCAGCCTTATTTTTCCATTGAGCCTGAAACA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTTATGGAAACAGTGCAAAGTTGGTTTATAGTATATTGGAAGGGCAGCCTTATTTTTCCATTGAGCCTGAAACA  666

Query  667  GCTATTATAAAAACTGCCCTTCCCAACATGGACAGAGAAGCCAAGGAGGAGTACCTGGTTGTTATCCAAGCCAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCTATTATAAAAACTGCCCTTCCCAACATGGACAGAGAAGCCAAGGAGGAGTACCTGGTTGTTATCCAAGCCAA  740

Query  741  AGATATGGGTGGACACTCTGGTGGCCTGTCTGGGACCACGACACTTACAGTGACTCTTACTGATGTTAATGACA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGATATGGGTGGACACTCTGGTGGCCTGTCTGGGACCACGACACTTACAGTGACTCTTACTGATGTTAATGACA  814

Query  815  ATCCTCCAAAATTTGCACAGAGCCTGTATCACTTCTCAGTACCGGAAGATGTGGTTCTTGGCACTGCAATAGGA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATCCTCCAAAATTTGCACAGAGCCTGTATCACTTCTCAGTACCGGAAGATGTGGTTCTTGGCACTGCAATAGGA  888

Query  889  AGGGTGAAGGCCAATGATCAGGATATTGGTGAAAATGCACAGTCATCATATGATATCATCGATGGAGATGGAAC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGGGTGAAGGCCAATGATCAGGATATTGGTGAAAATGCACAGTCATCATATGATATCATCGATGGAGATGGAAC  962

Query  963  AGCACTTTTTGAAATCACTTCTGATGCCCAGGCCCAGGATGGCATTATAAGGCTAAGAAAACCTCTGGACTTTG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGCACTTTTTGAAATCACTTCTGATGCCCAGGCCCAGGATGGCATTATAAGGCTAAGAAAACCTCTGGACTTTG  1036

Query 1037  AGACCAAAAAATCCTATACGCTAAAGGTAGAGGCAGCCAATGTCCATATTGACCCACGCTTCAGTGGCAGGGGG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGACCAAAAAATCCTATACGCTAAAGGTAGAGGCAGCCAATGTCCATATTGACCCACGCTTCAGTGGCAGGGGG  1110

Query 1111  CCCTTTAAAGACACGGCGACAGTCAAAATCGTGGTTGAAGATGCTGATGAGCCTCCGGTCTTCTCTTCACCGAC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCCTTTAAAGACACGGCGACAGTCAAAATCGTGGTTGAAGATGCTGATGAGCCTCCGGTCTTCTCTTCACCGAC  1184

Query 1185  TTACCTACTTGAAGTTCATGAAAATGCTGCTCTAAACTCCGTGATTGGGCAAGTGACTGCTCGTGACCCTGATA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TTACCTACTTGAAGTTCATGAAAATGCTGCTCTAAACTCCGTGATTGGGCAAGTGACTGCTCGTGACCCTGATA  1258

Query 1259  TCACTTCCAGTCCTATAAGGTTTTCCATCGACCGGCACACTGACCTGGAGAGGCAGTTCAACATTAATGCAGAC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCACTTCCAGTCCTATAAGGTTTTCCATCGACCGGCACACTGACCTGGAGAGGCAGTTCAACATTAATGCAGAC  1332

Query 1333  GATGGGAAGATAACGCTGGCAACACCACTTGACAGAGAATTAAGTGTATGGCACAACATAACAATCATTGCTAC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GATGGGAAGATAACGCTGGCAACACCACTTGACAGAGAATTAAGTGTATGGCACAACATAACAATCATTGCTAC  1406

Query 1407  TGAAATTAGGAACCACAGTCAGATATCACGAGTACCTGTTGCTATTAAAGTGCTGGATGTCAATGACAACGCCC  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGAAATTAGGAACCACAGTCAGATATCACGAGTACCTGTTGCTATTAAAGTGCTGGATGTCAATGACAACGCCC  1480

Query 1481  CTGAATTCGCATCCGAATATGAGGCATTTTTATGTGAAAATGGAAAACCCGGCCAAGTCATTCAAACTGTTAGC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CTGAATTCGCATCCGAATATGAGGCATTTTTATGTGAAAATGGAAAACCCGGCCAAGTCATTCAAACTGTTAGC  1554

Query 1555  GCCATGGACAAAGATGATCCCAAAAACGGACATTATTTCTTATACAGTCTCCTTCCAGAAATGGTCAACAATCC  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GCCATGGACAAAGATGATCCCAAAAACGGACATTATTTCTTATACAGTCTCCTTCCAGAAATGGTCAACAATCC  1628

Query 1629  GAATTTCACCATCAAGAAAAATGAAGATAATTCCCTCAGTATTTTGGCAAAGCATAATGGATTCAACCGCCAGA  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GAATTTCACCATCAAGAAAAATGAAGATAATTCCCTCAGTATTTTGGCAAAGCATAATGGATTCAACCGCCAGA  1702

Query 1703  AGCAAGAAGTCTATCTTTTACCAATCATAATCAGTGATAGTGGAAATCCTCCACTGAGCAGCACTAGCACCTTG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AGCAAGAAGTCTATCTTTTACCAATCATAATCAGTGATAGTGGAAATCCTCCACTGAGCAGCACTAGCACCTTG  1776

Query 1777  ACAATCAGGGTCTGTGGCTGCAGCAATGACGGTGTCGTCCAGTCTTGCAATGTCGAAGCTTATGTCCTTCCAAT  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ACAATCAGGGTCTGTGGCTGCAGCAATGACGGTGTCGTCCAGTCTTGCAATGTCGAAGCTTATGTCCTTCCAAT  1850

Query 1851  TGGACTCAGTATGGGCGCCTTAATTGCCATATTAGCATGCATCATTTTGCTGTTAGTCATCGTGGTGCTGTTTG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TGGACTCAGTATGGGCGCCTTAATTGCCATATTAGCATGCATCATTTTGCTGTTAGTCATCGTGGTGCTGTTTG  1924

Query 1925  TAACTCTACGGCGGCATAAAAATGAACCATTAATTATCAAAGATGATGAAGACGTTCGAGAAAACATCATTCGC  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TAACTCTACGGCGGCATAAAAATGAACCATTAATTATCAAAGATGATGAAGACGTTCGAGAAAACATCATTCGC  1998

Query 1999  TACGATGATGAAGGAGGAGGGGAGGAGGACACAGAGGCTTTTGACATTGCAACTTTACAAAATCCAGATGGAAT  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TACGATGATGAAGGAGGAGGGGAGGAGGACACAGAGGCTTTTGACATTGCAACTTTACAAAATCCAGATGGAAT  2072

Query 2073  TAATGGATTTTTACCCCGTAAGGATATTAAACCAGATTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAG---  2143
            |||||||||||||||||        ||||   ||||     ||              |||| |||||  ||   
Sbjct 2073  TAATGGATTTTTACCCC--------ATTA---CAGA-----AG--------------AGGG-TTGCT--AGGAG  2113

Query 2144  -----TTCCAAATGGTGTTGATGTCGATGAATTTATAAATGTAAGGCTGCATGAGGCAGATAATGATCCCACAG  2212
                 |..|||     |.||.||||                                                 
Sbjct 2114  GAATATCACAA-----GATGCTGTC-------------------------------------------------  2133

Query 2213  CCCCGCCATATGACTCCATTCAGATATATGGCTATGAAGGCCGAGGGTCAGTGGCTGGCTCCCTCAGCTCCTTG  2286
                                                                                      
Sbjct 2134  --------------------------------------------------------------------------  2133

Query 2287  GAGTCCACCACATCAGACTCAGACCAGAATTTTGACTACCTCAGTGACTGGGGTCCCCGCTTTAAGAGACTGGG  2360
                                                                                      
Sbjct 2134  --------------------------------------------------------------------------  2133

Query 2361  CGAACTCTACTCTGTTGGTGAAAGTGACAAAGAAACT  2397
                                                 
Sbjct 2134  -------------------------------------  2133

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