Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06036
- Subject:
- NM_001110859.2
- Aligned Length:
- 1081
- Identities:
- 363
- Gaps:
- 680
Alignment
Query 1 ------------------------------------------------ATGACCATGGTAACAGTTGAATCCCA 26
||||||||||.||||||||||||.||
Sbjct 1 ATGAGCAAATGTGGCAGGAAAAAGTATATGAGGACAAATGTAAGGCAAATGACCATGGAAACAGTTGAATCACA 74
Query 27 GCATGATGGAAGTATAACAGCTTCTTTGACAGAG---AGCAAGTCTGCTCATGTGCAGA--------------- 82
|||.|||.|||||.|||||..||||.||.||||| ||| |||||||||.||||||
Sbjct 75 GCAGGATCGAAGTGTAACACGTTCTGTGGCAGAGCATAGC---TCTGCTCATATGCAGACTGGTCAAATTTCTG 145
Query 83 ------------CTCAG---------------------ACT--------------------------------- 90
||||| |||
Sbjct 146 TTCCTACTCTAGCTCAGGTTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCCCAGCTGTGACTCTAGTACAG 219
Query 91 ---------GGCCAAA--------------------ATTCA--------ATCCCTGCTTTA------------- 114
||||||| ||||| ||||.|...|||
Sbjct 220 TTACCTTCAGGCCAAACTGTACAGGTCCAGGGAGTTATTCAGACACCACATCCATCGGTTATTCAATCACCACA 293
Query 115 ----------GCTCAGGTAGCAGCAATTGCAGAGACAGATGAATCTGCAGAATCAGAAGGTGTAATTGATTCTC 178
|.||||||||||.|||||||||||||||||||.||||||||.|||||| |||||||||||.|
Sbjct 294 AATACAAACTGTTCAGGTAGCAACAATTGCAGAGACAGATGATTCTGCAGACTCAGAA---GTAATTGATTCGC 364
Query 179 ATAAACGTAGAGAAATCCTTTCACGAAGACCCTCTTATAGGAAAATACTGAATGAACTGTCCTCTGATGTGCCT 252
||||||||||||||||.|||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||
Sbjct 365 ATAAACGTAGAGAAATTCTTTCACGAAGACCCTCATATAGAAAAATACTGAATGAACTTTCCTCTGATGTGCCT 438
Query 253 GGTGTTCCCAAGATTGAAGAAGAGAGATCAGAGGAAGAAGGAACACCACCTAGTATTGCTACCATGGCAGTACC 326
|||.|||||||||||||||||||.|.|||||||||||||||.||||||||||..||||||||||||||||||||
Sbjct 439 GGTATTCCCAAGATTGAAGAAGAAAAATCAGAGGAAGAAGGGACACCACCTAACATTGCTACCATGGCAGTACC 512
Query 327 AACTAGCATATATCAGACTAGCACGGGGCAATACAGTATG-TAT-GCTGCAA-----------------TTC-- 379
||||||||||||||||||||||||||||||||||| .|| ||| ||| ||| |||
Sbjct 513 AACTAGCATATATCAGACTAGCACGGGGCAATACA--TTGCTATAGCT-CAAGGTGGAACAATCCAGATTTCTA 583
Query 380 ------GATATGAT------------------------ACAGTGCTAGCTTTA--AGTCTTCTC---------- 411
|||.|||| |||.||..|..||.| || ||.|||
Sbjct 584 ACCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATTAACAATGACAAATTCAGGAG-CTCCTCCGCCAGGTGC 656
Query 412 -------------------------------------------------------------------------- 411
Sbjct 657 TACAATTGTACAGTATGCAGCACAATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTG 730
Query 412 -------------------------------------------------------------------------- 411
Sbjct 731 TTCAAGATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTACCAGATC 804
Query 412 -------------------------------------------------------------------------- 411
Sbjct 805 CGAGCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCTGCCTCACCAGGAAGCCTGCACAGTCCCCAGCA 878
Query 412 -------------------------------------------------------------------------- 411
Sbjct 879 ACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCTAAAGAATGTCGAC 952
Query 412 -------------------------------------------------------------------------- 411
Sbjct 953 GTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA 1026
Query 412 --------------------------------------------- 411
Sbjct 1027 GAGGAGCTTGAAACTTTGAAAGACATTTGCTCTCCCAAAACAGAT 1071