Nucleotide Global Alignment

Description

• Query: ccsbBroad304_06036
• Subject: XM_006525565.3
• Aligned Length: 890
• Identities: 363
• Gaps: 487

Alignment

Query   1  ------------------------------------------------ATGACCATGGTAACAGTTGAATCCCA  26
                                                           ||||||||||.||||||||||||.||
Sbjct   1  ATGAGCAAATGTGGCAGGAAAAAGTATATGAGGACAAATGTAAGGCAAATGACCATGGAAACAGTTGAATCACA  74

Query  27  GCATGATGGAAGTATAACAGCTTCTTTGACAGAG---AGCAAGTCTGCTCATGTGCAGA---------------  82
           |||.|||.|||||.|||||..||||.||.|||||   |||   |||||||||.||||||               
Sbjct  75  GCAGGATCGAAGTGTAACACGTTCTGTGGCAGAGCATAGC---TCTGCTCATATGCAGACTGGTCAAATTTCTG  145

Query  83  ------------CTCAG---------------------ACT---------------------------------  90
                       |||||                     |||                                 
Sbjct 146  TTCCTACTCTAGCTCAGGTTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCCCAGCTGTGACTCTAGTACAG  219

Query  91  ---------GGCCAAA--------------------ATTCA--------ATCCCTGCTTTA-------------  114
                    |||||||                    |||||        ||||.|...|||             
Sbjct 220  TTACCTTCAGGCCAAACTGTACAGGTCCAGGGAGTTATTCAGACACCACATCCATCGGTTATTCAATCACCACA  293

Query 115  ----------GCTCAGGTAGCAGCAATTGCAGAGACAGATGAATCTGCAGAATCAGAAGGTGTAATTGATTCTC  178
                     |.||||||||||.|||||||||||||||||||.||||||||.||||||   |||||||||||.|
Sbjct 294  AATACAAACTGTTCAGGTAGCAACAATTGCAGAGACAGATGATTCTGCAGACTCAGAA---GTAATTGATTCGC  364

Query 179  ATAAACGTAGAGAAATCCTTTCACGAAGACCCTCTTATAGGAAAATACTGAATGAACTGTCCTCTGATGTGCCT  252
           ||||||||||||||||.|||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||
Sbjct 365  ATAAACGTAGAGAAATTCTTTCACGAAGACCCTCATATAGAAAAATACTGAATGAACTTTCCTCTGATGTGCCT  438

Query 253  GGTGTTCCCAAGATTGAAGAAGAGAGATCAGAGGAAGAAGGAACACCACCTAGTATTGCTACCATGGCAGTACC  326
           |||.|||||||||||||||||||.|.|||||||||||||||.||||||||||..||||||||||||||||||||
Sbjct 439  GGTATTCCCAAGATTGAAGAAGAAAAATCAGAGGAAGAAGGGACACCACCTAACATTGCTACCATGGCAGTACC  512

Query 327  AACTAGCATATATCAGACTAGCACGGGGCAATACAGT---------------------------ATGTATGCTG  373
           |||||||||||||||||||||||||||||||||||.|                           |||..|||||
Sbjct 513  AACTAGCATATATCAGACTAGCACGGGGCAATACAATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG  586

Query 374  CAATTC----GATATGATA------CAG--------TGCTA-----GCTTT-----------------------  401
           |.|  |    ||.|||..|      |||        |.|||     |||||                       
Sbjct 587  CCA--CAGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCTG  658

Query 402  ----------AAGTCTTCTC------------------------------------------------------  411
                     |||.||.|.|                                                      
Sbjct 659  CCTCACCAGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATG  732

Query 412  --------------------------------------------------------------------------  411
                                                                                     
Sbjct 733  AAAAACAGGGAAGCTGCCCGGGAGTGTCGCAGGAAGAAGAAAGAATATGTCAAATGTCTTGAAAATCGTGTGGC  806

Query 412  --------------------------------------------------------------------------  411
                                                                                     
Sbjct 807  TGTGCTTGAAAATCAAAACAAGACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCTTTATTGCCATAAAGCAG  880

Query 412  --  411
             
Sbjct 881  AG  882