Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06056
- Subject:
- XR_002957961.1
- Aligned Length:
- 4259
- Identities:
- 1244
- Gaps:
- 3014
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAGCGCGATGGCGGCGGCTCCTTTAGGCAGCTGAAAGGGGATTTAGGCCCGGAAGATCCGAGTCCATCCGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGGAGAGGGCAAGCGGGACCGGTAGGGGCCGGAGCAGCGGCGGCGGCGCTCGGACTGTCCCATCCGCCCCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTGAGGCGCTGGGAGCGGCGGGGCGACAGGAAAGCGATGGTGAAAGCGGGGCCGTGAGGGGGGCGGAGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCGGACCCGCAGTAGCGGCAGCAGCGGCGCCGCCTCCCAGAGTTCAGACCCAGGAAGCGGCCGGGAGGGCAG 296
Query 1 -----------------------ATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGCGAATCGGGCCGCCGCCGCCATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC 370
Query 52 GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT 444
Query 126 CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA 518
Query 200 CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC 592
Query 274 CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT 666
Query 348 CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA 740
Query 422 AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC 814
Query 496 CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA 888
Query 570 ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG 962
Query 644 GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG 1036
Query 718 TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC 1110
Query 792 TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG 1184
Query 866 ACTGGAACATGCTCAAATTT------------------------------------------------------ 885
||||||||||||||||||||
Sbjct 1185 ACTGGAACATGCTCAAATTTGTTGCTGTCTCGGCTTAAAATCTGACCTCCCCACCCCCGTGCATCTGGATAGTG 1258
Query 886 -------------------------------------------------------------------------- 885
Sbjct 1259 CAGCACAGATCCGGCTGCCGGCTGCTGGCCACGCCACCACACCTGCACAGGCTGTTGGAGGCTGCAGGGTCCGG 1332
Query 886 -------------------------------------------------------------------------- 885
Sbjct 1333 ACCCTGAGTGTACTCCTCGTCCGACCAAACGCTCTCATCCCCACCCCGCTTTCCTCCCCAGCTGTCACCATTTG 1406
Query 886 -------------------------------------------------------------------------- 885
Sbjct 1407 GGGCCTGTCTTTGGCCTCCGATGGTTCCTGTCCCTCTCCTCTTTCTGCACGTGTTAGTGAGCATGTTCACAGAG 1480
Query 886 -------------------------------------------------------------------------- 885
Sbjct 1481 CAGCAGGGGGTAGCTGCTGCCCATTTGGAAGTTTAAGGAAGTTCTGAGCCCACAGGGAGATGCCATGGCGAGTG 1554
Query 886 -------------------------------------------------------------------------- 885
Sbjct 1555 GGGTTTTTTCGATTGTTGGGGGAGCTGAGAGGCCTGGCTCTGACCCCTTGTGGGGATGATGCTGTCATCCCATG 1628
Query 886 -------------------------------------------------------------------------- 885
Sbjct 1629 AGGAGAAACGTGCAGCCTGTGGGGGGCTTTGCAGGCAGTCTCGTCCCAGTGCCCTTTGGTAGGTATTTTCTCAC 1702
Query 886 -------------------------------------------------------------------------- 885
Sbjct 1703 GTGGCCGGGGCAGCCTAGGACCTAGGGTTGCTTTCTGCCAAAGCTGGTTCCATTCCGGCCTCACCTCCTGCCTC 1776
Query 886 -----GGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAGCGGCTGAGACACTCG 954
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTCAGGGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAGCGGCTGAGACACTCG 1850
Query 955 CGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCAGGAAGTGGCTCCCCC 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCAGGAAGTGGCTCCCCC 1924
Query 1029 CACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCTGTCTCCGGCATGGAGAGAGAGCGGA 1102
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1925 CACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCATGGAGAGAGAGCGGA 1998
Query 1103 AAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACAGGCCGACAAGATACC 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACAGGCCGACAAGATACC 2072
Query 1177 TCTCGCATGTCCACCTCACAGATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGA----- 1245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TCTCGCATGTCCACCTCACAGATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGA 2146
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2147 ACTCTCCTTATTGCTGTGAAGGGCAGACAATGCATGGCTGATCTACTCTGTTACCAATGGCTTTACTAGTGACA 2220
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2221 CGTCCCCCGGTCTAGGATCGAAATGTTAACACCGGGAGCTCTCCAGGCCACTCACCCAGCGACGCTCGTGGGGG 2294
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2295 AAACATACTAAACGGACAGACTCCAAGAGCTGCCACCGCTGGGGCTGCACTGCGGCCCCCCACGTGAACTCGGT 2368
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2369 TGTAACGGGGCTGGGAAGAAAAGCAGAGAGAGAATTGCAGAGAATCAGACTCCTTTTCCAGGGCCTCAGCTCCC 2442
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2443 TCCAGTGGTGGCCGCCCTGTACTCCCTGACGATTCCACTGTAACTACCAATCTTCTACTTGGTTAAGACAGTTT 2516
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2517 TGTATCATTTTGCTAAAAATTATTGGCTTAAATCTGTGTAAAGAAAATCTGTCTTTTTATTGTTTCTTGTCTGT 2590
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2591 TTTTGCAGTCTTACAAAAAAAATGTTGACTAAGGAATTCTGAGACAGGCTGGCTTGGAGTTAGTGTATGAGGTG 2664
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2665 GAGTCGGGCAGGGAGAAGGTGCAGGTGGATCTCAAGGGTGTGTGCTGTGTTTGTTTTGCAGTGTTTTATTGTCC 2738
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2739 GCTTTGGAGAGGAGATTTCTCATCAAAAGTCCGTGGTGTGTGTGTGTGCCCGTGTGTGGTGGGACCTCTTCAAC 2812
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2813 CTGATTTTGGCGTCTCACCCTCCCTCCTCCCGTAATTGACATGCCTGCTGTCAGGAACTCTTGAGGCCCTCGGA 2886
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2887 GAGCAGTTAGGGACCGCAGGCTGCCGCGGGGCAGGGGTGCAGTGGGTGTTACCAGGCAAAGCACTGCGCGCTTC 2960
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2961 TTCCCCAGGAGGTGGGCAGGCAGCTGAGAGCTTGGAAGCAGAGGCTTTGAGACCCTAGCAGGACAATTGGGAGT 3034
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3035 CCCAGGATTCAAGGTGGAAGATGCGTTTCTGGTCCCTTGGGAGAGGACTGTGAACCGAGAGGTGGTTACTGTAG 3108
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3109 TGTTTGTTGCCTTGCTGCCTTTGCACTCAGTCCATTTTCTCAGCACTCAATGCTCCTGTGCGGATTGGCACTCC 3182
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3183 GTCTGTATGAATGCCTGTGCTTAAAACCAGGAGCGGGGCTGTCCTTGCCACGTGCCAAGACTAGCTCAGAAAAG 3256
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3257 CCGGCAGGCCAGAAGGACCCACCCTGAGGTGCCAAGGAGCAGGTGACTCTCCCAACCGGACCCAGAACCTTCAC 3330
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3331 GGCCAGAAAGTAGAGTCTGCGCTGTGACCTTCTGTTGGGCGCGTGTCTGTTGGTCAGAAGTGAAGCAGCGTGCG 3404
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3405 TGGGGCCGAGTCCCACCAGAAGGCAGGTGGCCTCCGTGAGCTGGTGCTGCCCCAGGCTCCATGCTGCTGTGCCC 3478
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3479 TGAGGTTCCCAGGATGCCTTCTCGCCTCTCACTCCGCAGCACTTGGGCGGTAGCCAGTGGCCATGTGCTCCCAA 3552
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3553 CCCCAATGCGCAGGGCAGTCTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACGATGGACGATGTTCCCTTTG 3626
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3627 GACTCTAGGGCTTCGAAGGTGTGCACCTTGGTTCTCCCTTCTCCTCCCCAGAGTTCCCCGGATGCCATAACTGG 3700
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3701 CTGGCGTCCCAGAACACAGTTGTTCACCCCCCCACCAGCTGGCTGGCCGTCTGCCTGAGCCCATGGATGCTTTC 3774
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3775 TCAATCCTAGGCTGGTTACTGTGTAAGCGTTTTGGAGTACGGGGCCTTGAGCGGGTGGGAGCTGTGTGTTGAAG 3848
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3849 TACAGAGGGAGGTTGGGGTGGGTCAGAGCCGAGTTAAGAGATTTTCTTTGTTGCTGGACCCCTTCTTGAAGGTA 3922
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3923 GACGTCCCCCACCCGGAGAGACGTCGCGCTGTGGCCTGAAGTGGCGCAAGCTTGCTTTGTAAATATCTGTGGTC 3996
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3997 CCGATGTAGTGCCCAGAACGTTTGTGCGAGGCAGCTCTGCGCCCGGGTTCCAGCCCGAGCCTCGCCGGGTCGCG 4070
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 4071 TCTTCGGAGTGCTTGTGACAGTCCTTGCCCAGTATCTAGTCCCCGTCGCCCCGTGCAGGAGACGTAGGTAGGAC 4144
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 4145 GTCGTGTCAGCTGTGCACTGACGGCCAGTCTCCGAGCTGTGCGTTTGTATCGCCACTGTATTTGTGTACTTTAA 4218
Query 1246 ----------------------------------------- 1245
Sbjct 4219 CAATCGTGTAAATAATAAATTCATAATGACTTCTACCTTTC 4259
