Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06063
- Subject:
- XM_011532557.2
- Aligned Length:
- 2859
- Identities:
- 1367
- Gaps:
- 1491
Alignment
Query 1 ATGACTTCGGCAACTTCACCTATCATTCTGAAATGGGACCCCAAAAGTTTGGAAATCCGGACGCTAACAGTGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AAGGCTGTTGGAGCCACTTGTTACACAGGTGACTACACTTGTCAACACAAGCAACAAAGGCCCATCTGGTAAAA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGAAAGGGAGGTCAAAGAAAGCCCATGTACTAGCTGCCTCTGTAGAGCAAGCCACTCAGAATTTCCTGGAAAAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGTGAACAGATCGCTAAGGAGAGTCAAGATCTCAAAGAAGAGTTGGTGGCTGCTGTAGAGGATGTGCGCAAACA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGGTGAGACGATGCGGATCGCCTCCTCCGAGTTTGCAGATGACCCTTGCTCGTCGGTAAAGCGCGGCACCATGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TACGGGCGGCAAGGGCTTTGCTCTCCGCGGTGACACGCTTACTCATCCTGGCGGACATGGCAGATGTCATGAGA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CTTTTATCCCATCTGAAAATTGTGGAAGAGGCCCTGGAAGCTGTCAAAAATGCTACAAATGAGCAAGACCTTGC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AAACCGTTTTAAAGAGTTTGGGAAAGAGATGGTGAAACTTAACTATGTAGCAGCAAGAAGACAACAGGAGCTGA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGGATCCTCACTGTCGGGATGAGATGGCAGCCGCCCGAGGGGCTCTGAAGAAGAATGCCACAATGCTGTACACG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GCCTCTCAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACGAGAGCCAACCGAGATTATGTGTTCAAACAAGT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CCAGGAGGCCATCGCCGGCATCTCCAATGCTGCTCAAGCTACCTCGCCCACTGACGAAGCCAAGGGCCACACGG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GCATCGGCGAGCTGGCTGCGGCTCTTAATGAGTTTGACAATAAGATTATCCTGGACCCCATGACGTTCAGCGAG 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GCCAGGTTCCGGCCGTCCCTGGAGGAGAGGCTGGAGAGCATCATCAGCGGCGCAGCGCTGATGGCCGACTCCTC 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CTGCACGCGAGACGACCGGCGCGAGAGGATCGTGGCGGAGTGCAACGCCGTGCGGCAGGCGCTCCAGGACCTGC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 TCAGCGAGTACATGAATAATACTGGAAGGAAAGAAAAAGGAGATCCTCTCAACATTGCGATTGATAAGATGACT 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 AAGAAAACAAGAGATCTAAGGAGACAGCTTCGGAAAGCAGTGATGGATCACATATCTGACTCTTTCCTGGAAAC 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CAATGTTCCTTTGCTAGTTCTCATTGAGGCTGCAAAGAGCGGAAATGAAAAGGAAGTGAAAGAATATGCCCAAG 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 TTTTCCGTGAGCATGCCAACAAACTGGTAGAGGTTGCCAATTTGGCCTGTTCCATCTCCAACAATGAAGAAGGG 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 GTGAAATTAGTTCGGATGGCAGCCACCCAGATTGACAGCCTGTGTCCCCAGGTCATCAATGCCGCTCTGACACT 1406
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ---------------ATGGCAGCCACCCAGATTGACAGCCTGTGTCCCCAGGTCATCAATGCCGCTCTGACACT 59
Query 1407 GGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATAACATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGTCC 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 GGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATAACATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGTCC 133
Query 1481 GAGTGTTGACAGAGGCCGTGGATGACATCACCTCAGTGGATGACTTCCTCTCTGTCTCAGAAAATCACATCTTG 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 134 GAGTGTTGACAGAGGCCGTGGATGACATCACCTCAGTGGATGACTTCCTCTCTGTCTCAGAAAATCACATCTTG 207
Query 1555 GAGGATGTGAACAAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGACACTCTGGACCGGACTGCAGGGGCCAT 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 208 GAGGATGTGAACAAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGACACTCTGGACCGGACTGCAGGGGCCAT 281
Query 1629 CAGGGGCCGGGCAGCTCGAGTCATACACATCATCAATGCTGAGATGGAGAACTATGAAGCTGGGGTTTATACTG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 282 CAGGGGCCGGGCAGCTCGAGTCATACACATCATCAATGCTGAGATGGAGAACTATGAAGCTGGGGTTTATACTG 355
Query 1703 AGAAGGTGTTGGAAGCTACAAAATTGCTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAAGTAGAGGTTGCC 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 AGAAGGTGTTGGAAGCTACAAAATTGCTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAAGTAGAGGTTGCC 429
Query 1777 ATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAATGAGTTCATCGATGCCTCTCGCCTGGTGTA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 430 ATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAATGAGTTCATCGATGCCTCTCGCCTGGTGTA 503
Query 1851 TGATGGCGTTCGGGACATCAGAAAGGCTGTGCTGATGATCAGGACCCCAGAAGAACTAGAGGATGATTCTGACT 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 504 TGATGGCGTTCGGGACATCAGAAAGGCTGTGCTGATGATCAGGACCCCAGAAGAACTAGAGGATGATTCTGACT 577
Query 1925 TTGAGCAAGAAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGACTGAGGATGACCAGCTCATTGCAGGGCAG 1998
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 578 TTGAGCAGGAAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGACTGAGGATGACCAGCTCATTGCAGGGCAG 651
Query 1999 AGCGCACGGGCCATCATGGCGCAACTACCGCAGGAGGAGAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 AGCGCACGGGCCATCATGGCGCAACTACCGCAGGAGGAGAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA 725
Query 2073 TCAAGAGAAAAGCAAGCTGGATGCAGAAGTGGCCAAATGGGACGACAGCGGCAATGATATCATTGTACTGGCCA 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 726 TCAAGAGAAAAGCAAGCTGGATGCAGAAGTGGCCAAATGGGACGACAGCGGCAATGATATCATTGTACTGGCCA 799
Query 2147 AGCAGATGTGTATGATCATGATGGAAATGACAGACTTCACAAGAGGCAAAGGCCCATTGAAAAATACATCTGAT 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 800 AGCAGATGTGTATGATCATGATGGAAATGACAGACTTCACAAGAGGCAAAGGCCCATTGAAAAATACATCTGAT 873
Query 2221 GTCATTAATGCTGCCAAGAAAATTGCCGAAGCAGGTTCTCGAATGGACAAATTAGCTCGTGCTGTGGCTGATCA 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 874 GTCATTAATGCTGCCAAGAAAATTGCCGAAGCAGGTTCTCGAATGGACAAATTAGCTCGTGCTGTGGCTGATCA 947
Query 2295 GTGTCCTGATTCAGCATGTAAGCAGGATTTATTAGCCTACCTTCAACGAATTGCCTTGTATTGCCATCAGCTTA 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 948 GTGTCCTGATTCAGCATGTAAGCAGGATTTATTAGCCTACCTTCAACGAATTGCCTTGTATTGCCATCAGCTTA 1021
Query 2369 ATATCTGCAGCAAGGTGAAGGCAGAAGTGCAGAATCTGGGAGGAGAGCTCATTGTGTCAGG------------- 2429
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022 ATATCTGCAGCAAGGTGAAGGCAGAAGTGCAGAATCTGGGAGGAGAGCTCATTGTGTCAGGGACAGGAGTTCAG 1095
Query 2430 -------------------------------------------------------------------------- 2429
Sbjct 1096 AGCACTTTCACTACCTTTTATGAGGTAGATTGTGATGTCATAGATGGGGGCAGGGCTAGTCAACTTTCTACCCA 1169
Query 2430 ---------------------------------------------------------GCTGGACAGTGCCACAT 2446
|||||||||||||||||
Sbjct 1170 CCTCCCAACCTGTGCTGAGGGAGCTCCGATCGGGAGTGGAAGCAGTGATTCCTCCATGCTGGACAGTGCCACAT 1243
Query 2447 CGCTTATCCAGGCAGCTAAAAACCTGATGAATGCTGTTGTCCTCACGGTGAAAGCATCCTATGTGGCCTCAACC 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1244 CGCTTATCCAGGCAGCTAAAAACCTGATGAATGCTGTTGTCCTCACGGTGAAAGCATCCTATGTGGCCTCAACC 1317
Query 2521 AAATACCAGAAGGTCTATGGGACAGCAGCTGTCAACTCACCTGTTGTGTCTTGGAAGATGAAGGCTCCAGAGAA 2594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 AAATACCAGAAGGTCTATGGGACAGCAGCTGTCAACTCACCTGTTGTGTCTTGGAAGATGAAGGCTCCAGAGAA 1391
Query 2595 GAAGCCCCTTGTGAAGAGAGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACGAGGTTCTCAGAAGAAACACA 2668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1392 GAAGCCCCTTGTGAAGAGAGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACGAGGTTCTCAGAAGAAACACA 1465
Query 2669 TTTCGCCTGTACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTTC 2715
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1466 TTTCGCCTGTACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTTC 1512
