Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06095
- Subject:
- NR_135151.2
- Aligned Length:
- 2920
- Identities:
- 1012
- Gaps:
- 1906
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCCGGCCTGTGCCAGCTTGCAGAGCTCACCAGGTGCAGACCCCTGCGGCCAGGGCGAGGACGGATCTGAGCAG 74
Query 1 ------------------------------------------------------ATGCTCCAGAAGCCCAAGAG 20
||||||||||||||||||||
Sbjct 75 CTGGGCAGCAGGTGCCACCGCCTGTGGGACCCAGAGGGCTTGAGGACATCTGCAATGCTCCAGAAGCCCAAGAG 148
Query 21 CGTGAAGCTGCGGGCCCTGCGCAGCCCGAGGAAGTTCGGCGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCA 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGTGAAGCTGCGGGCCCTGCGCAGCCCGAGGAAGTTCGGCGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCA 222
Query 95 AGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGGTTCCCGGCTGTGCCTGTACGAGGATGGCACGGAGCTGACG 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGGTTCCCGGCTGTGCCTGTACGAGGATGGCACGGAGCTGACG 296
Query 169 GAAGATTACTTCCCCAGTGTTCCCGACAACGCCGAGCTGGTGCTGCTCACCTTGGGCCAGGCCTGGCAGGGCT- 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAAGATTACTTCCCCAGTGTTCCCGACAACGCCGAGCTGGTGCTGCTCACCTTGGGCCAGGCCTGGCAGGGCTG 370
Query 242 -------------------------------------------------------------------------- 241
Sbjct 371 GTTTCGCCATGTTTCCCAGGATAGTCTCACACTCCTGGGCTCAAGCTGTCCTCCTGCCTTGGTCTCCTAAAGTG 444
Query 242 ------------ATGTGAGCGACATCAGGCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGGGCTCATCCAG 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGGGATTACAGATGTGAGCGACATCAGGCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGGGCTCATCCAG 518
Query 304 GCCGCCCAGCAGCTGCTGTGTGATGAGCAGGCCCCACAGAGGCAGAGGCTGCTGGCTGACCTCCTGCACAACGT 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCGCCCAGCAGCTGCTGTGTGATGAGCAGGCCCCACAGAGGCAGAGGCTGCTGGCTGACCTCCTGCACAACGT 592
Query 378 CAGCCAGAACATCGCGGCCGAGACCCGGGCTGAGGACCCGCCGTGGTTTGAAGGCTTGGAGTCCCGATTTCAGA 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGCCAGAACATCGCGGCCGAGACCCGGGCTGAGGACCCGCCGTGGTTTGAAGGCTTGGAGTCCCGATTTCAGA 666
Query 452 GCAAGTCTGGCTATCTGAGATACAGCTGTGAGAGCCGGATCCGGAGTTACCTGAGGGAGGTGAGCTCCTACCCC 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCAAGTCTGGCTATCTGAGATACAGCTGTGAGAGCCGGATCCGGAGTTACCTGAGGGAGGTGAGCTCCTACCCC 740
Query 526 TCCACAGTGGGTGCGGAGGCTCAGGAGGAATTCCTGCGGGTCCTCGGCTCCATGTGCCAGAGGCTCCGGTCCAT 599
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCCACGGTGGGTGCGGAGGCTCAGGAGGAATTCCTGCGGGTCCTCGGCTCCATGTGCCAGAGGCTCCGGTCCAT 814
Query 600 GCAGTACAATGGCAGCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCCTCTGCACACCGGAAGGCTGGTTCT 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCAGTACAATGGCAGCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCCTCTGCACACCGGAAGGCTGGTTCT 888
Query 674 CCTGCCAGGGTCCCTTTGACATGGACAGCTGCTTATCAAGACACTCCATCAACCCCTACAGTAACAGGGAGAGC 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCTGCCAGGGTCCCTTTGACATGGACAGCTGCTTATCAAGACACTCCATCAACCCCTACAGTAACAGGGAGAGC 962
Query 748 AGGATCCTCTTCAGCACCTGGAACCTGGATCACATAATAGAAAAGAAACGCACCATCATTCCTACACTGGTGGA 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGGATCCTCTTCAGCACCTGGAACCTGGATCACATAATAGAAAAGAAACGCACCATCATTCCTACACTGGTGGA 1036
Query 822 AGCAATTAAGGAACAAGATGGAAGAGAAGTGGACTGGGAGTATTTTTATGGCCTGCTTTTTACCTCAGAGAACC 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCAATTAAGGAACAAGATGGAAGAGAAGTGGACTGGGAGTATTTTTATGGCCTGCTTTTTACCTCAGAGAACC 1110
Query 896 TAAAACTAGTGCACATTGTCTGCCATAAGAAAACCACCCACAAGCTCAACTGTGACCCGAGCAGAATCTACAAA 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1111 TAAAACTAGTGCACATTGTCTGCCATAAGAAAACCACCCACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA 1184
Query 970 CCCCAGACAAGGTTGAAGCGGAAGCAGCCTGTGCGGAAACGCCAG----------------------------- 1014
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCCCAGACAAGGTTGAAGCGGAAGCAGCCTGTGCGGAAACGCCAGTGACACGTACACACCACGTCCTGGTCTTT 1258
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1259 GTTTGAGGCCTGACGTGGGCATCATTTTAACAGGTGCCTTTTTTGTTTTTTTGTTTTTCGTTTTTTTGGTCACT 1332
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1333 CCAGTAGCTCCTGGAAAAAACCTTAAAAAATGTTTCCTCCAAATCTGATTTCATTACATTTCTGAATTGTTGGG 1406
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1407 GTTTTTTTTGTTGTTTTGTTTTGTTTTGTAGATGGAGTTTCACTTTTGTTGCCCAGGCTGGAGTGTAGTGGCGC 1480
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1481 GATCTCGGCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCCGGCTAATGTTTGTATTTTT 1554
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1555 AGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCCACCTCAG 1628
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1629 CCTCCCAAAGTGCTGGGATGACAGGTGTGAGCCACTGCGCCCAGCCTGAATCATTTCTTATACCTTCTGACAGC 1702
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1703 CCAACTTCCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGAT 1776
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1777 AAGAATTGTCTCTGGGCTGAGGAATTCTTCTGTTCTCTGGTTTCACCAGCGTTGGGTTTGCTCATGTAATGTGG 1850
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1851 TCACCATACTCAAATGGTGTCATGGCTGAAGTTGGCCACCTTGCTTGAGGGACAAGTTGTTTATGTATCAGCTC 1924
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1925 TCTGCTGGGTCTCCCTTTCCATGGCAAATGGGCAGCTCCATCCTCTTGACTCTTCTAAATGCCCAAAAGAGGTG 1998
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1999 TCATGCTTTGGGGGTACGATGTTTATACTCCGTAAAGAACATACAAGGACATTCACTGCTGATTTTTTTTTTTG 2072
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2073 TTTGTTTGAGACAGGGTCTCACTCTGTCGCTCAGGCTGGAGTGCAGTGATGCAATCTTGGCTCACTGCAACCTC 2146
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2147 CGCCTCTCAGGTTCAAGTGGTTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCTACCACCAGGG 2220
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2221 CCAGCTAATTTTTGTATGTTTAGTAGAAACGGGGTTTCACCATGTTGGCCAGGCTGTTCTCGAACTCCTGACCT 2294
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2295 CAGGTGATCTGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCTGACCTGCTGAA 2368
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2369 TTGTTTATAATGGCAAGAAATAGGAAACCCCCCAATGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACT 2442
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2443 GCTGTTTTCTAGGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACATAGTGCAAA 2516
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2517 ACTGTGTCACAGTTTCAGGCTTTTATGAGGAAAGCGTTTCTGTGTAGAAACTGGAAGCTGTTCAGGGCATCGGC 2590
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2591 AGCTGAACCCTGCTCCGTTGGTCAGCGTTACTATCATCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGGTG 2664
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2665 GCGGGTGCACAGAGACGGTCTGGAAGGAAACACGCGGATCTGAACAGCAGTAATCCTGGGGGATACGGGGGTTG 2738
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2739 GGCTAGATTACAGAGGGCTCATTTTCTACGTCATGTATTTTATGATACTTGAATTTTTTGAAATGGGCATTTAT 2812
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2813 TTTATAACATGTTAAAATGTACTTTTTAAATTAAGTCATTTTGTAATATTTGAATTTTTACATTTGTTGTACAA 2886
Query 1015 ---------------------------------- 1014
Sbjct 2887 TCAGGAAAAGCAATAAAGATTTTTCAAAAATAGA 2920
