Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06166
- Subject:
- NR_073037.2
- Aligned Length:
- 3275
- Identities:
- 863
- Gaps:
- 2411
Alignment
Query 1 ---------------------------------------------------------------ATGGCCGAGAA 11
|||||||||||
Sbjct 1 GCATTCCCGGCGGCTCCGGGTTTGGCAACGAGGACGGGGGAGTGCGACTGCGTCTCGGGCAGCATGGCCGAGAA 74
Query 12 GCGNCACACACGGGACTCCGAAGCCCAGCGGCTCCCCGACTCCTTCAAG------------------------- 60
|||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCGGCACACACGGGACTCCGAAGCCCAGCGGCTCCCCGACTCCTTCAAGGAAACTTGAACTCCAAGCATTTGGC 148
Query 61 -------------------------------------------------------------------------- 60
Sbjct 149 CTCACATTTCAGAAGATTATCCTTGAAGATACAACCAATAAAGTCCTAAAGTCTCAGACAATGAAAACTATACT 222
Query 61 -------------------------------GACAGCCCCAGTAAGGGCCTTGGACCTTGCGGATGGATTTTGG 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAACTTGTGGTCCAGTTAAAGTGAGCACTATGACAGCCCCAGTAAGGGCCTTGGACCTTGCGGATGGATTTTGG 296
Query 104 TGGCGTTCTCATTCTTATTCACCGTTATAACTTTCCCAATCTCAATATGGATGTGCATAAAGATTATAAAAGAG 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGCGTTCTCATTCTTATTCACCGTTATAACTTTCCCAATCTCAATATGGATGTGCATAAAGATTATAAAAGAG 370
Query 178 TATGAAAGAGCCATCATCTTTAGATTGGGTCGCATTTTACAAGGAGGAGCCAAAGGACCTGGTTTGTTTTTTAT 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TATGAAAGAGCCATCATCTTTAGATTGGGTCGCATTTTACAAGGAGGAGCCAAAGGACCTGGTTTGTTTTTTAT 444
Query 252 TCTGCCATGCACTGACAGCTTCATCAAAGTGGACATGAGAACTATTTCATTTGATATTCCTCCTCAGGAGATCC 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCTGCCATGCACTGACAGCTTCATCAAAGTGGACATGAGAACTATTTCATTTGATATTCCTCCTCAGGAGATCC 518
Query 326 TCACAAAGGATTCAGTGACAATTAGCGTGGATGGTGTGGTCTATTACCGCGTTCAGAATGCAACCCTGGCTGTG 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCACAAAGGATTCAGTGACAATTAGCGTGGATGGTGTGGTCTATTACCGCGTTCAGAATGCAACCCTGGCTGTG 592
Query 400 GCAAATATCACCAACGCTGACTCAGCAACCCGTCTTTTGGCACAAACTACTCTGAGGAATGTTCTGGGCACCAA 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCAAATATCACCAACGCTGACTCAGCAACCCGTCTTTTGGCACAAACTACTCTGAGGAATGTTCTGGGCACCAA 666
Query 474 GAATCTTTCTCAGATCCTCTCTGACAGAGAAGAAATTGCACACAACATGCAGTCTACTCTGGATGATGCCACTG 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAATCTTTCTCAGATCCTCTCTGACAGAGAAGAAATTGCACACAACATGCAGTCTACTCTGGATGATGCCACTG 740
Query 548 ATGCCTGGGGAATAAAGGTGGAGCGTGTGGAAATTAAGGATGTGAAACTACCTGTGCAGCTCCAGAGAGCTATG 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATGCCTGGGGAATAAAGGTGGAGCGTGTGGAAATTAAGGATGTGAAACTACCTGTGCAGCTCCAGAGAGCTATG 814
Query 622 GCTGCAGAAGCAGAAGCGTCCCGCGAGGCCCGCGCCAAGGTTATTGCAGCCGAAGGAGAAATGAATGCATCCAG 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCTGCAGAAGCAGAAGCGTCCCGCGAGGCCCGCGCCAAGGTTATTGCAGCCGAAGGAGAAATGAATGCATCCAG 888
Query 696 GGCTCTGAAAGAAGCCTCCATGGTCATCACTGAATCTCCTGCAGCCCTTCAGCTCCGATACCTGCAGACACTGA 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGCTCTGAAAGAAGCCTCCATGGTCATCACTGAATCTCCTGCAGCCCTTCAGCTCCGATACCTGCAGACACTGA 962
Query 770 CCACCATTGCTGCTGAGAAAAACTCAACAATTGTCTTCCCTCTGCCCATAGATATGCTGCAAGGAATCATAGGG 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCACCATTGCTGCTGAGAAAAACTCAACAATTGTCTTCCCTCTGCCCATAGATATGCTGCAAGGAATCATAGGG 1036
Query 844 GCAAAACACAGCCATCTAGGC----------------------------------------------------- 864
|||||||||||||||||||||
Sbjct 1037 GCAAAACACAGCCATCTAGGCTAGTGTAGAGATGAGCGCTAGCCTTCCAAGCATGAAGTCGGGGACCAAATTAG 1110
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1111 CCTTTAACTCATAAAGAGAGGGTAGGGCTTTTCTTTTTCCATATGTCAATTGTGGTGTTCCCAGAATGTATAGC 1184
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1185 AGTTATAAAAATAGGTGAAAGAATTGTTAGCTTGTAAATACTGAGAGATTGGTGATTTATATAAGGTAATCTGT 1258
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1259 TAGTCTTAAAATAGTTAAAAGTTTGTATTTTTAGATTATTATGTAGTAGGTTAGATCCCTCTTGTTTTGACTTC 1332
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1333 CACTGACTCATTCTGAACCCCCTAAGCACCCAGGCCAGAGGCAAGAACCTGGGCTGTAACTGCCACCTGACACC 1406
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1407 GCTGACTGGCTAAATGCTTTGCAGAAAGTGATGACCTTACACCACAACCAGCTTCTCCAGGTCATATGTGCCTT 1480
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1481 ACCTCCAGAGAGTCTTTTTTTTTTTTTTTCTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATAG 1554
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1555 CATGATCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCCAGTAGCTG 1628
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1629 GGATTACAGGCTCATGCCACCATGCCCAGCTAATTTTTGTATTATTATTATTGTTTTTTAGTAGAGACGGGGTT 1702
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1703 TCACCATGTTGGCCAGGCTAGTCACGAACTCCTAACCTCAGGTGATCCACCCACCTCTGCCTCCCAAAGTGCTG 1776
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1777 GGATTACAGGCATGAGCTACCACACCTGGTTTGGAGAGTCTTAATTAAGGAAATTTCCCTAATGTTCATTTATT 1850
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1851 TTCTAAATCCAGACCGTGTTTCAGAATAATCCTTACTTGAGAGTAGCCATTTTCTTGCCTGTACTTGTCAGAAC 1924
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1925 TAGAGGAAATAGCCAAGACTAATGAAAAAGATTACTCTAACCCTTAAAAGACTTTTAAATTCACTACTAGAGTG 1998
Query 865 -------------------------------------------------------------------------- 864
Sbjct 1999 GTCATTTTAAAAATACATCCATGTTTTAACTTATTTGAGCCTTCTTTATGAGTAAATGATTCCTCCTTGTTCTG 2072
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2073 TCTTTCAAACCAGCTAAATATTTGTCACAAAAGTGCTTTTTTCTCACTGTTGCCTATTTTCATATATCAGGTTT 2146
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2147 TAAATAGTTTTAATTTTTTAATAAAATTTTCTCTACGTTCTATATGCAATTGTTATATATCTATTTGAATAGCT 2220
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2221 GAAGGACTAAAATACTTTTTTAAGAGATAACTTCAGGAAACCATTATATTTTACTATCTGCATGCTGTTAACTG 2294
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2295 TGGTACACTGTGAAATATGTTGATTACAAACCCATTCATTACATAGTATAAGGAATTCACAGTATATTGACTAT 2368
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2369 ATAGTGTCTAATGATCTTGGGCAGATACTGTCAAACTTACAATATCTATATAGATGTAGGTCTTTTTAAATTTA 2442
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2443 CCTAGTCATTCTTCTATCATGTATATTGATGCTGAAAGAGGAACTGGTCAGCTCCTCTGGACAACAAATTCTTA 2516
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2517 GTCTATAATATTAGGAGACATCTTCTGTTTTGCAAATGTCTGTGAATCTGAGCAACCTGGCATTCTGCTTACTG 2590
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2591 GCCAGAAAGCTGGCGGGTGACATTTGTAACATTTCCTCTTTGAGACTCTGAGTTCACCTAGAGAAGTCTAAGCA 2664
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2665 TAACAGCTTTCTTTCCCAGCACGAGCCTTTATAGCTCTCTTTAGCTCAACCACTCTGTCCATCCAGCCAATGGA 2738
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2739 TGTCCCTTCCCCTGTACCCCAATTTCAAGCTTATTTTAGGAAGCCTTGAACTACCATGTATCCTGGCTCCTAGC 2812
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2813 TGAGTTTATTAGAGGTATGGAGCAGTGCAACTTAAACTCAAGTTGCACTTACATTTTGAATTTTAAAATGATGG 2886
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2887 TTTTATCTGTTGTGTGAAGTGGTTCACCCTTGAGGACCAGGAGCCTCCATATCCTGACTGAAAACCTTTTCTGA 2960
Query 865 -------------------------------------------------------------------------- 864
Sbjct 2961 GACTTAGAGTAACAGTGCTTTTGGTTCCTTGAGTTCTCCTGTCTCCAGATACCAAATGACCTTGACTTTTCTGC 3034
Query 865 -------------------------------------------------------------------------- 864
Sbjct 3035 CTTGTGAATTCGTAGTCCAATCAGCTGAAATTAAATCACTTGGGAGGGACGCATAGAAGGAGCTCTAGGAACAC 3108
Query 865 -------------------------------------------------------------------------- 864
Sbjct 3109 AGTGCCAGTGCAGAAGTTTCTCCAGGTGGCCTCCCTTTCCAACAATGTACATAATAAAGTGTATGCACTTTCAC 3182
Query 865 -------------------------------------------------------------------------- 864
Sbjct 3183 TAATATTTTTGGGGTGAGAGTCTGTTTCGGCCTGTATTGAATGTCTGTGGATTTCCGTTTTCAGAAGTAGTACA 3256
Query 865 ------------------- 864
Sbjct 3257 TTAGATCCTCCGGTTCTGA 3275
