Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06169
- Subject:
- XM_017319954.1
- Aligned Length:
- 2996
- Identities:
- 1652
- Gaps:
- 1183
Alignment
Query 1 ATGGTTTTTCAAACTCGGTACCCTTCATGGATTATTTTATGCTACATCTGGCTGCTCCGCTTTGCACACACAGG 74
||||||.||||||||||||.||||||.|||||||||||.||.||||||||||||||..|||||||||||||.||
Sbjct 1 ATGGTTGTTCAAACTCGGTTCCCTTCGTGGATTATTTTGTGTTACATCTGGCTGCTTGGCTTTGCACACACGGG 74
Query 75 GGAGGCGCAGGCTGCGAAGGAAGTACTACTGCTGGATTCTAAAGCACAACAAACAGAGTTGGAGTGGATTTCCT 148
||||||||||||||||||||||||||||.|.|||||.||.|||||||||||||||||.|||||.||||||||||
Sbjct 75 GGAGGCGCAGGCTGCGAAGGAAGTACTATTACTGGACTCGAAAGCACAACAAACAGAATTGGAATGGATTTCCT 148
Query 149 CTCCACCCAATGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTATACCCCGATACGAACATACCAGGTGTGC 222
|||||||||.||||||||||||||||||||||||||||||||||||.||.||||||.|||||||||||||||||
Sbjct 149 CTCCACCCAGTGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTACACTCCGATAAGAACATACCAGGTGTGC 222
Query 223 CAAGTCATGGAGCCCAACCAAAACAACTGGCTGCGGACTAACTGGATTTCCAAAGGCAATGCACAAAGGATTTT 296
||.|||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||
Sbjct 223 CAGGTCATGGAGCCCAACCAGAACAACTGGCTGCGGACTAACTGGATTTCTAAAGGCAACGCACAAAGGATTTT 296
Query 297 TGTAGAATTGAAATTCACCCTGAGGGATTGTAACAGTCTTCCTGGAGTACTGGGAACTTGCAAGGAAACATTTA 370
|||||||||||||||||||.|||||||||||||.||||||||.|||||.||||||||||||||||||||.||||
Sbjct 297 TGTAGAATTGAAATTCACCTTGAGGGATTGTAATAGTCTTCCCGGAGTCCTGGGAACTTGCAAGGAAACGTTTA 370
Query 371 ATTTGTACTATTATGAAACAGACTATGACACTGGCAGGAATATAAGAGAAAACCTCTATGTAAAAATAGACACC 444
|||||||||||||||||||||||||.|||||.||||||||||||.||||||||||.|||||.||||||||||||
Sbjct 371 ATTTGTACTATTATGAAACAGACTACGACACCGGCAGGAATATACGAGAAAACCTTTATGTTAAAATAGACACC 444
Query 445 ATTGCTGCAGATGAAAGTTTTACCCAAGGTGACCTTGGTGAAAGAAAGATGAAGCTTAACACTGAGGTGAGAGA 518
||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 445 ATTGCTGCAGATGAAAGTTTCACACAAGGTGACCTTGGTGAAAGAAAGATGAAGCTGAACACTGAGGTGAGAGA 518
Query 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCTTTGGTTTCTG 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCATTGGTTTCTG 592
Query 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTATTGAGAACTTAGCTATCTTTCCAGATACAGTGACTGGTTCA 666
||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||.
Sbjct 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTGTTGAGAACTTAGCTGTCTTTCCAGATACAGTGACTGGTTCG 666
Query 667 GAATTTTCCTCTTTAGTCGAGGTTCGAGGGACATGTGTCAGCAGTGCAGAGGAAGAAGCGGAAAACGCCCCCAG 740
|||||||||||.|||||||||||.||.||||||||||||||||||||.||||||||.||.|||||..|||||||
Sbjct 667 GAATTTTCCTCCTTAGTCGAGGTCCGTGGGACATGTGTCAGCAGTGCCGAGGAAGAGGCAGAAAATTCCCCCAG 740
Query 741 GATGCACTGCAGTGCAGAAGGAGAATGGTTAGTGCCCATTGGAAAATGTATCTGCAAAGCAGGCTACCAGCAAA 814
.|||||.|||||||||||||||||.|||.||||.||||||||||||||.|||||||||||||||||.|||||||
Sbjct 741 AATGCATTGCAGTGCAGAAGGAGAGTGGCTAGTACCCATTGGAAAATGCATCTGCAAAGCAGGCTATCAGCAAA 814
Query 815 AAGGAGACACTTGTGAACCCTGTGGCCGTGGGTTCTACAAGTCTTCCTCTCAAGATCTTCAGTGCTCTCGTTGT 888
||||.||||||||.||||||||||||||..||||||||||.|||||||||||.|||||.|||||.|||||||||
Sbjct 815 AAGGGGACACTTGCGAACCCTGTGGCCGCAGGTTCTACAAATCTTCCTCTCAGGATCTCCAGTGTTCTCGTTGT 888
Query 889 CCAACTCACAGTTTTTCTGATAAAGAAGGCTCCTCCAGATGTGAATGTGAAGATGGGTATTACAGGGCTCCATC 962
|||||.|||||.||.|||||...||||||.||.|||||.||||||||||||||||||||.|||||.|||||.||
Sbjct 889 CCAACCCACAGCTTCTCTGACCGAGAAGGATCATCCAGGTGTGAATGTGAAGATGGGTACTACAGAGCTCCTTC 962
Query 963 TGACCCACCATACGTTGCATGCACAAGGCCTCCATCTGCACCACAGAACCTCATTTTCAACATCAACCAAACCA 1036
|||.||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||.|||||.|||||.|
Sbjct 963 TGATCCACCATACGTTGCATGCACGAGGCCTCCCTCTGCACCACAGAACCTTATTTTCAATATCAATCAAACGA 1036
Query 1037 CAGTAAGTTTGGAATGGAGTCCTCCTGCAGACAATGGGGGAAGAAACGATGTGACCTACAGAATATTGTGTAAG 1110
|.|||||||||||||||||||||||.||.|||||.|||||||||||||||||.||||||||||||.||||||||
Sbjct 1037 CTGTAAGTTTGGAATGGAGTCCTCCGGCTGACAACGGGGGAAGAAACGATGTCACCTACAGAATACTGTGTAAG 1110
Query 1111 CGGTGCAGTTGGGAGCAGGGCGAATGTGTTCCCTGTGGGAGTAACATTGGATACATGCCCCAGCAGACTGGATT 1184
||||||||||||||.|||||.||||||||.||.||.||.|||||||||||||||||||||||||||||.|||||
Sbjct 1111 CGGTGCAGTTGGGAACAGGGAGAATGTGTGCCATGCGGAAGTAACATTGGATACATGCCCCAGCAGACGGGATT 1184
Query 1185 AGAGGATAACTATGTCACTGTCATGGACCTGCTAGCCCACGCTAATTATACTTTTGAAGTTGAAGCTGTAAATG 1258
||||||||||||||||||||||||||||||.||.|||||.||.|||||.|||||.|||||||||||||||||||
Sbjct 1185 AGAGGATAACTATGTCACTGTCATGGACCTACTTGCCCATGCAAATTACACTTTCGAAGTTGAAGCTGTAAATG 1258
Query 1259 GAGTTTCTGACTTAAGCCGATCCCAGAGGCTCTTTGCTGCTGTCAGTATCACCACTGGTCAAGCAGCTCCCTCG 1332
|||||||.|||||||||.||||||||||||||||.||||||||.||.||||||||.||||||||||||||||||
Sbjct 1259 GAGTTTCGGACTTAAGCAGATCCCAGAGGCTCTTCGCTGCTGTTAGCATCACCACCGGTCAAGCAGCTCCCTCG 1332
Query 1333 CAAGTGAGCGGAGTAATGAAGGAGAGAGTACTGCAGCGGAGTGTCGAGCTTTCCTGGCAGGAACCAGAGCATCC 1406
||||||||.|||||.|||||||||.|||||||||||||||||||..||||||||||||||||.||.||||||||
Sbjct 1333 CAAGTGAGTGGAGTCATGAAGGAGCGAGTACTGCAGCGGAGTGTGCAGCTTTCCTGGCAGGAGCCGGAGCATCC 1406
Query 1407 CAATGGAGTCATCACAGAATATGAAATCAAGTATTACGAGAAAGATCAAAGGGAACGGACCTACTCAACAGTAA 1480
|||||||||||||||.||||||||||||||||||||.||||||||||||.|||||.||||.|||||||||.|.|
Sbjct 1407 CAATGGAGTCATCACGGAATATGAAATCAAGTATTATGAGAAAGATCAACGGGAAAGGACGTACTCAACACTCA 1480
Query 1481 AAACCAAGTCTACTTCAGCCTCCATTAATAATCTGAAACCAGGAACAGTGTATGTTTTCCAGATTCGGGCTTTT 1554
||||||||||.||.||.|||||||||||||||||||||||.|||||||||||.||.||.|||||.|||||..|.
Sbjct 1481 AAACCAAGTCCACCTCCGCCTCCATTAATAATCTGAAACCGGGAACAGTGTACGTCTTTCAGATCCGGGCGGTC 1554
Query 1555 ACTGCTGCTGGTTATGGAAATTACAGTCCCAGACTTGATGTTGCTACACTAGAGGAAGCTACAGGTAAAATGTT 1628
||||||||.|||||||||||.|||||.||.||.|||||||||||.|||||.|||||||||.|
Sbjct 1555 ACTGCTGCCGGTTATGGAAACTACAGCCCTAGGCTTGATGTTGCCACACTTGAGGAAGCTTC------------ 1616
Query 1629 TGAAGCTACAGCTGTCTCCAGTGAACAGAATCCTGTTATTATCATTGCTGTGGTTGCTGTAGCTGGGACCATCA 1702
|||.|||||.|||||||||||||||||||||||.||.||.||||||||.||.||||||||.||||||||||
Sbjct 1617 ---AGCGACAGCAGTCTCCAGTGAACAGAATCCTGTCATCATAATTGCTGTAGTGGCTGTAGCAGGGACCATCA 1687
Query 1703 TTTTGGTGTTCATGGTCTTTGGCTTCATCATTGGGAGAAGGCACTGTGGTTATAGCAAAGCTGACCAAGAAGGC 1776
|.||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||.||||||||||||||.
Sbjct 1688 TCTTGGTGTTCATGGTGTTCGGCTTCATCATTGGAAGAAGGCACTGTGGTTATAGCAAGGCTGACCAAGAAGGG 1761
Query 1777 GATGAAGAGCTTTACTTTCAT--TTTAAATTTCCAGGCACCAAAACCTACATTGACCCTGAAACCTATGAGGAC 1848
||||||||.||.||||||||| |||| |.|||..|||||.||
Sbjct 1762 GATGAAGAACTCTACTTTCATTCTTTA--------------------------------GTAACAAATGAGCAC 1803
Query 1849 CCAAATAGAGCTGTCCATCAATTCGCCAAGGAGCTAGATGCCTCCTGTATTAAAATTGAGCGTGTGATTGGTGC 1922
|||| |.||.|||
Sbjct 1804 ----------CTGT------------------------------CAGTTTTA---------------------- 1815
Query 1923 AGGAGAATTCGGTGAAGTCTGCAGTGGCCGTTTGAAACTTCCAGGGAAAAGAGATGTTGCAGTAGCCATAAAAA 1996
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 1997 CCCTGAAAGTTGGTTACACAGAAAAACAAAGGAGAGACTTTTTGTGTGAAGCAAGCATCATGGGGCAGTTTGAC 2070
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2071 CACCCGAATGTTGTCCATTTGGAAGGGGTTGTTACAAGAGGGAAACCAGTCATGATAGTAATAGAGTTCATGGA 2144
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2145 AAATGGAGCCCTAGATGCATTTCTCAGGAAACATGATGGGCAATTTACAGTCATTCAGTTAGTAGGAATGCTGA 2218
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2219 GAGGAATTGCTGCTGGAATGAGATATTTGGCTGATATGGGATATGTTCACAGGGACCTTGCAGCTCGCAATATT 2292
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2293 CTTGTCAACAGCAATCTCGTTTGTAAAGTGTCAGATTTTGGCCTGTCCCGAGTTATAGAGGATGATCCAGAAGC 2366
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2367 TGTCTATACAACTACTGGTGGAAAAATTCCAGTAAGGTGGACAGCACCCGAAGCCATCCAGTACCGGAAATTCA 2440
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2441 CATCAGCCAGTGATGTATGGAGCTATGGAATAGTCATGTGGGAAGTTATGTCTTATGGAGAAAGACCTTATTGG 2514
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2515 GACATGTCAAATCAAGATGTTATAAAAGCAATAGAAGAAGGTTATCGTTTACCAGCACCCATGGACTGCCCAGC 2588
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2589 TGGCCTTCACCAGCTAATGTTGGATTGTTGGCAAAAGGAGCGTGCTGAAAGGCCAAAATTTGAACAGATAGTTG 2662
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2663 GAATTCTAGACAAAATGATTCGAAACCCAAATAGTCTGAAAACTCCCCTGGGAACTTGTAGTAGGCCAATAAGC 2736
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2737 CCTCTTCTGGATCAAAACACTCCTGATTTCACTACCTTTTGTTCAGTTGGAGAATGGCTACAAGCTATTAAGAT 2810
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2811 GGAAAGATATAAAGATAATTTCACGGCAGCTGGCTACAATTCCCTTGAATCAGTAGCCAGGATGACTATTGAGG 2884
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2885 ATGTGATGAGTTTAGGGATCACACTGGTTGGTCATCAAAAGAAAATCATGAGCAGCATTCAGACTATGAGAGCA 2958
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2959 CAAATGCTACATTTACATGGAACTGGCATTCAAGTG 2994
Sbjct 1816 ------------------------------------ 1815
