Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06183
- Subject:
- XM_011530001.2
- Aligned Length:
- 2016
- Identities:
- 863
- Gaps:
- 1128
Alignment
Query 1 ATGGCGTCCACGGATTACAGTACCTATAGCCAAGCTGCAGCGCAGCAGGGCTACAGTGCTTACACCGCCCAGCC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGTCCACGGATTACAGTACCTATAGCCAAGCTGCAGCGCAGCAGGGCTACAGTGCTTACACCGCCCAGCC 74
Query 75 CACTCAAGGATATGCACAGACCACC---CAGGCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCCACTG 145
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CACTCAAGGATATGCACAGACCACCCAGCAGGCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCCACTG 148
Query 146 ATGTCAGCTATACCCAGGCTCAGACCACTGCAACCTATGGGCAGACCGCCTATGCAACTTCTTATGGACAGCCT 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGTCAGCTATACCCAGGCTCAGACCACTGCAACCTATGGGCAGACCGCCTATGCAACTTCTTATGGACAGCCT 222
Query 220 CCCACTGGTTATACTACTCCAACTGCCCCCCAGGCATACAGCCAGCCTGTCCAGGGGTATGGCACTGGTGCTTA 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCCACTGGTTATACTACTCCAACTGCCCCCCAGGCATACAGCCAGCCTGTCCAGGGGTATGGCACTGGTGCTTA 296
Query 294 TGATACCACCACTGCTACAGTCACCACCACCCAGGCCTCCTATGCAGCTCAGTCTGCATATGGCACTCAGCCTG 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGATACCACCACTGCTACAGTCACCACCACCCAGGCCTCCTATGCAGCTCAGTCTGCATATGGCACTCAGCCTG 370
Query 368 CTTATCCAGCCTATGGGCAGCAGCCAGCAGCCACTGCACCTACAAGACCGCAGGATGGAAACAAGCCCACTGAG 441
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTTATCCAGCCTATGGGCAGCAGCCAGCAGCCACTGCACCTACA------------------------------ 414
Query 442 ACTAGTCAACCTCAATCTAGCACAGGGGGTTACAACCAGCCCAGCCTAGGATATGGACAGAGTAACTACAGTTA 515
Sbjct 415 -------------------------------------------------------------------------- 414
Query 516 TCCCCAGGTACCTGGGAGCTACCCCATGCAGCCAGTCACTGCACCTCCATCCTACCCTCCTACCAGCTATTCCT 589
||||||||||
Sbjct 415 ----------------------------------------------------------------AGCTATTCCT 424
Query 590 CTACACAGCCGACTAGTTATGATCAGAGCAGTTACTCTCAGCAGAACACCTATGGGCAACCGAGCAGCTATGGA 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 425 CTACACAGCCGACTAGTTATGATCAGAGCAGTTACTCTCAGCAGAACACCTATGGGCAACCGAGCAGCTATGGA 498
Query 664 CAGCAGAGTAGCTATGGTCAACAAAGCAGCTATGGGCAGCAGCCTCCCACTAGTTACCCACCCCAAACTGGATC 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 499 CAGCAGAGTAGCTATGGTCAACAAAGCAGCTATGGGCAGCAGCCTCCCACTAGTTACCCACCCCAAACTGGATC 572
Query 738 CTACAGCCAAGCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTACGGGCAGCAGAGTTCATTCCGACAGGACC 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 573 CTACAGCCAAGCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTACGGGCAGCAGAGTTCATTCCGACAGGACC 646
Query 812 ACCCCAGTAGCATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGACCAGGAGAGAACCGGAGCATGAGT 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 ACCCCAGTAGCATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGACCAGGAGAGAACCGGAGCATGAGT 720
Query 886 GGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAGAGGTGGGCGGGGAGGAGG 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 GGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAGAGGTGGGCGGGGAGGAGG 794
Query 960 ACGCGGTGTAATGGG----GTTACAAAGTGAG------------AGCCTTGTATACACTTCAATACTTAAAAAG 1017
||||||||.|||||| |.|..|.||.||| |||||.||..||.|.|..|| .|||
Sbjct 795 ACGCGGTGGAATGGGCAGCGCTGGAGAGCGAGGTGGCTTCAATAAGCCTGGTGGACCCATGGAT------GAAG 862
Query 1018 TACCCGTACT-----------------------CAG-----TACTCAGCCGGCA--GCA---TA---------A 1049
.|||.|..|| ||| .||||.|.|..|| ||| || |
Sbjct 863 GACCAGATCTTGATCTAGGCCCACCTGTAGATCCAGATGAAGACTCTGACAACAGTGCAATTTATGTACAAGGA 936
Query 1050 TGAAA----AGTGGGAC--------------------------------------------------------- 1062
|.||| ||||.|||
Sbjct 937 TTAAATGACAGTGTGACTCTAGATGATCTGGCAGACTTCTTTAAGCAGTGTGGGGTTGTTAAGATGAACAAGAG 1010
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1011 AACTGGGCAACCCATGATCCACATCTACCTGGACAAGGAAACAGGAAAGCCCAAAGGCGATGCCACAGTGTCCT 1084
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1085 ATGAAGACCCACCCACTGCCAAGGCTGCCGTGGAATGGTTTGATGGGAAAGATTTTCAAGGGAGCAAACTTAAA 1158
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1159 GTCTCCCTTGCTCGGAAGAAGCCTCCAATGAACAGTATGCGGGGTGGTCTGCCACCCCGTGAGGGCAGAGGCAT 1232
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1233 GCCACCACCACTCCGTGGAGGTCCAGGAGGCCCAGGAGGTCCTGGGGGACCCATGGGTCGCATGGGAGGCCGTG 1306
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1307 GAGGAGATAGAGGAGGCTTCCCTCCAAGAGGACCCCGGGGTTCCCGAGGGAACCCCTCTGGAGGAGGAAACGTC 1380
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1381 CAGCACCGAGCTGGAGACTGGCAGTGTCCCAATCCTTCAATTGGTGATTTCTGCTGTGATGTAATTGTATGCAG 1454
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1455 GGGTTGTGGAAACCAGAACTTCGCCTGGAGAACAGAGTGCAACCAGTGTAAGGCCCCAAAGCCTGAAGGCTTCC 1528
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1529 TCCCGCCACCCTTTCCGCCCCCGGGTGGTGATCGTGGCAGAGGTGGCCCTGGTGGCATGCGGGGAGGAAGAGGT 1602
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1603 GGCCTCATGGATCGTGGTGGTCCCGGTGGAATGTTCAGAGGTGGCCGTGGTGGAGACAGAGGTGGCTTCCGTGG 1676
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1677 TGGCCGGGGCATGGACCGAGGTGGCTTTGGTGGAGGAAGACGAGGTGGCCCTGGGGGGCCCCCTGGACCTTTGA 1750
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1751 TGGAACAGATGGGAGGAAGAAGAGGAGGACGTGGAGGACCTGGAAAAATGGATAAAGGCGAGCACCGTCAGGAG 1824
Query 1063 ------------------ 1062
Sbjct 1825 CGCAGAGATCGGCCCTAC 1842
