Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06233
- Subject:
- XM_011514013.3
- Aligned Length:
- 2586
- Identities:
- 1525
- Gaps:
- 1029
Alignment
Query 1 ------------------------------ATGGCGAAATATAACACGGGGGGCAACCCGACAGAGGATGTCTC 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATGGAAAGGCAGATGTAAAGTCCCTCATGGCGAAATATAACACGGGGGGCAACCCGACAGAGGATGTCTC 74
Query 45 AGTCAATAGCCGACCCTTCAGAGTCACAGGGCCAAACTCATCTTCAGGAATACAAGCAAGAAAGAACTTATTCA 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGTCAATAGCCGACCCTTCAGAGTCACAGGGCCAAACTCATCTTCAGGAATACAAGCAAGAAAGAACTTATTCA 148
Query 119 ACAACCAAGGAAATGCCAGCCCTCCTGCAGGACCCAGCAATGTACCTAAGTTTGGGTCCCCAAAGCCACCTGTG 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACAACCAAGGAAATGCCAGCCCTCCTGCAGGACCCAGCAATGTACCTAAGTTTGGGTCCCCAAAGCCACCTGTG 222
Query 193 GCAGTCAAACCTTCTTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGG 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCAGTCAAACCTTCTTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGG 296
Query 267 CCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGTGGGATTTCTGAAACCTGTAG 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGTGGGATTTCTGAAACCTGTAG 370
Query 341 GCCCCAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACCTACATTTCCCTGGCCTCCTGGAAACAAGCCATCT 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCCCAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACCTACATTTCCCTGGCCTCCTGGAAACAAGCCATCT 444
Query 415 CTTCACAGTGTAAACCAAGACCATGACTTAAAGCCACTAGGCCCGAAATCTGGGCCTACTCCTCCAACCTCAGA 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTTCACAGTGTAAACCAAGACCATGACTTAAAGCCACTAGGCCCGAAATCTGGGCCTACTCCTCCAACCTCAGA 518
Query 489 AAATGAACAGAAGCAAGCGTTTCCCAAATTGACTGGGGTTAAAGGGAAATTTATGTCAGCATCACAAGATCTTG 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAATGAACAGAAGCAAGCGTTTCCCAAATTGACTGGGGTTAAAGGGAAATTTATGTCAGCATCACAAGATCTTG 592
Query 563 AACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCCAGAAGCCGCCCCTAAGTACCGAGAACTCCCATGAAGAC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCCAGAAGCCGCCCCTAAGTACCGAGAACTCCCATGAAGAC 666
Query 637 GAAAGCCCCATGAAGAATGTGTCTTCATCAAAAGGGTCCCCAGCTCCCCTGGGAGTCAGGTCCAAAAGCGGCCC 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAAGCCCCATGAAGAATGTGTCTTCATCAAAAGGGTCCCCAGCTCCCCTGGGAGTCAGGTCCAAAAGCGGCCC 740
Query 711 TTTAAAACCAGCAAGGGAAGACTCAGAAAATAAAGACCATGCAGGGGAGATTTCAAGTTTGCCCTTTCCTGGAG 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTAAAACCAGCAAGGGAAGACTCAGAAAATAAAGACCATGCAGGGGAGATTTCAAGTTTGCCCTTTCCTGGAG 814
Query 785 TGGTTTTGAAACCTGCTGCGAGCAGGGGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAAAAAAGGAAGATAGG 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGTTTTGAAACCTGCTGCGAGCAGGGGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAAAAAAGGAAGATAGG 888
Query 859 AAGATAGATGCTGCTAAGAACACCTTCCAGAGCAAAATAAATCAGGAAGAGTTGGCCTCAGGGACTCCTCCTGC 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAGATAGATGCTGCTAAGAACACCTTCCAGAGCAAAATAAATCAGGAAGAGTTGGCCTCAGGGACTCCTCCTGC 962
Query 933 CAGGTTCCCTAAGGCCCCTTCTAAGCTGACAGTGGGGGGGCCATGGGGCCAAAGTCAGGAAAAGGAAAAGGGAG 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAGGTTCCCTAAGGCCCCTTCTAAGCTGACAGTGGGGGGGCCATGGGGCCAAAGTCAGGAAAAGGAAAAGGGAG 1036
Query 1007 ACAAGAATTCAGCCACCCCGAAACAGAAGCCATTGCCTCCCTTGTTTACCTTGGGTCCACCTCCACCAAAACCC 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACAAGAATTCAGCCACCCCGAAACAGAAGCCATTGCCTCCCTTGTTTACCTTGGGTCCACCTCCACCAAAACCC 1110
Query 1081 AACAGACCACCAAATGTTGACCTGACGAAATTCCACAAAACCTCTTCTGGAAACAGTACTAGCAAAGGCCAGAC 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AACAGACCACCAAATGTTGACCTGACGAAATTCCACAAAACCTCTTCTGGAAACAGTACTAGCAAAGGCCAGAC 1184
Query 1155 GTCTTACTCAACAACTTCCCTGCCACCACCTCCACCATCCCATCCGGCCAGCCAACCACCATTGCCAGCATCTC 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTCTTACTCAACAACTTCCCTGCCACCACCTCCACCATCCCATCCGGCCAGCCAACCACCATTGCCAGCATCTC 1258
Query 1229 ACCCATCACAACCACCAGTCCCAAGCCTACCTCCCAGAAACATTAAACCTCCGTTTGACCTAAAAAGCCCTGTC 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACCCATCACAACCACCAGTCCCAAGCCTACCTCCCAGAAACATTAAACCTCCGTTTGACCTAAAAAGCCCTGTC 1332
Query 1303 AATGAAGACAATCAAGATGGTGTCACGCACTCTGATGGTGCTGGAAATCTAGATGAGGAACAAGACAGTGAAGG 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AATGAAGACAATCAAGATGGTGTCACGCACTCTGATGGTGCTGGAAATCTAGATGAGGAACAAGACAGTGAAGG 1406
Query 1377 AGAAACATATGAAGACATAG---AAGCATCCAA---AGA---AAG----AGAG--AAGAAAAGGGAAAAGGAAG 1435
||||||||||||||||||.| |..||.|||| .|| ||| |||| |||
Sbjct 1407 AGAAACATATGAAGACATTGTTTATTCAACCAATTCTGACTCAAGTTTCAGAGCCAAG---------------- 1464
Query 1436 AAAAGAAGAGGTTAGAGCTG-----GAGAA---AAAGGAAC---------AGAAAGAGAAAGAAAAGAAAGAAC 1492
|.|||.|..|| |.||| |.|||.|| .|||||||
Sbjct 1465 ---------GTTTATATGTGTACCTGTGAATGCACAGGCACGTGTGCATATGAAAGAG---------------- 1513
Query 1493 AAGAAATAAAGAAGAA----ATTTAAACTAACA--------------GGCC-CTATTCAA-----GTCATCCAT 1542
|||||.|.|||.|.| |||||..|.|||| |||| |||| || |.|.||||
Sbjct 1514 -AGAAAAAGAGATGGATTCTATTTATGCGAACATACAGCAAGAATGGGGCCTCTAT--AAACGGTGGCTTCCA- 1583
Query 1543 CTT----GCAAAAGCTTGTTGTGATGTCAAAGGAGGAAAGAATGAACTGAGC--TTCAAGCAAGGAGAGCAAAT 1610
||| |||.|| |||||.| .|||||| |.|||| || |.||||
Sbjct 1584 CTTGCTGGCACAA----GTTGTCA---------GGGAAAG------CAGAGCCTTT---GGAAGG--------- 1626
Query 1611 TGAAATCATCCGCA-------TCACAGACAACCCAGAAGGAAAATGGTTGGGCAGAACAGCAAGGGGTTCATAT 1677
.|||.||.||| || |.|| |||||.
Sbjct 1627 ---TATCCTCAGCAGTGTGCCTC-----CTAC------------TGGTTT------------------------ 1656
Query 1678 GGCTATATTAAAACAACTGCTGTAGAGATTGACTATGATTCTTTGAAACTGAAAAAAGACTCTCTTGGTGCCCC 1751
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 1752 TTCAAGACCTATTGAAGATGACCAAGAAGTATATGATGATGTTGCAGAGCAGGATGATATTAGCAGCCACAGTC 1825
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 1826 AGAGTGGAAGTGGAGGGATATTCCCTCCACCACCAGATGATGACATTTATGATGGGATTGAAGAGGAAGATGCT 1899
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 1900 GATGATGGCTCCACACTACAGGTTCAAGAGAAGAGTAATACGTGGTCCTGGGGGATTTTGAAGATGTTAAAGGG 1973
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 1974 AAAAGATGACAGAAAGAAAAGTATACGAGAGAAACCTAAAGTCTCTGACTCAGACAATAATGAAGGTTCATCTT 2047
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 2048 TCCCTGCTCCTCCTAAACAATTGGACATGGGAGATGAAGTTTACGATGATGTGGATACCTCTGATTTCCCTGTT 2121
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 2122 TCATCAGCAGAGATGAGTCAAGGAACTAATTTTGGAAAAGCTAAGACAGAAGAAAAGGACCTTAAGAAGCTAAA 2195
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 2196 AAAGCAGGAAAAAGAAGAAAAAGACTTCAGGAAAAAATTTAAATATGATGGTGAAATTAGAGTCCTATATTCAA 2269
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 2270 CTAAAGTTACAACTTCCATAACTTCTAAAAAGTGGGGAACCAGAGATCTACAGGTAAAACCTGGTGAATCTCTA 2343
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 2344 GAAGTTATACAAACCACAGATGACACAAAAGTTCTCTGCAGAAATGAAGAAGGGAAATATGGTTATGTCCTTCG 2417
Sbjct 1657 -------------------------------------------------------------------------- 1656
Query 2418 GAGTTACCTAGCGGACAATGATGGAGAGATCTATGATGATATTGCTGATGGCTGCATCTATGACAATGAC 2487
Sbjct 1657 ---------------------------------------------------------------------- 1656
