Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06364
- Subject:
- NM_001322205.2
- Aligned Length:
- 2111
- Identities:
- 870
- Gaps:
- 1234
Alignment
Query 1 ATGGAGATTTATTCCCCAGACATGTCTGAGGTCGCCGCCGAGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGATTTATTCCCCAGACATGTCTGAGGTCGCCGCCGAGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGC 74
Query 75 AGACCCATCTCTTGATGGGCTTCCGGCAGCAGAAGACATGCCAGAGCCCCAGACTGAAGATGGGAGAACCCCTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGACCCATCTCTTGATGGGCTTCCGGCAGCAGAAGACATGCCAGAGCCCCAGACTGAAGATGGGAGAACCCCTG 148
Query 149 GACTCGTGGGCCTGGCCGTGCCCTGCTGTGCGTGCCTAGAAGCTGAGCGCCTGAGAGGTTGCCTCAACTCAGAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GACTCGTGGGCCTGGCCGTGCCCTGCTGTGCGTGCCTAGAAGCTGAGCGCCTGAGAGGTTGCCTCAACTCAGAG 222
Query 223 AAAATCTGCATTGTCCCCATCCTGGCTTGCCTGGTCAGCCTCTGCCTCTGCATCGCCGGCCTCAAGTGGGTATT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAAATCTGCATTGTCCCCATCCTGGCTTGCCTGGTCAGCCTCTGCCTCTGCATCGCCGGCCTCAAGTGGGTATT 296
Query 297 TGTGGACAAGATCTTTGAATATGACTCTCCTACTCACCTTGACCCTGGGGGGTTAGGCCAGGACCCTATTATTT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGTGGACAAGATCTTTGAATATGACTCTCCTACTCACCTTGACCCTGGGGGGTTAGGCCAGGACCCTATTATTT 370
Query 371 CTCTGGACGCAACTGCTGCCTCAGCTCTGTGGGTGTCGTCTGAGGCATACACTTCACCTGTCTCTAGGGCTCAA 444
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCTGGACGCAACTGCTGCCTCAGCTGTGTGGGTGTCGTCTGAGGCATACACTTCACCTGTCTCTAGGGCTCAA 444
Query 445 TCTGAAAGTGAGGTTCAAGTTACAGTGCAAGGTGACAAGGCTGTTGTCTCCTTTGAACCATCAGCGGCACCGAC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCTGAAAGTGAGGTTCAAGTTACAGTGCAAGGTGACAAGGCTGTTGTCTCCTTTGAACCATCAGCGGCACCGAC 518
Query 519 ACCGAAGAATCGTATTTTTGCCTTTTCTTTCTTGCCGTCCACTGCGCCATCCTTCCCTTCACCCACCCGGAACC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCGAAGAATCGTATTTTTGCCTTTTCTTTCTTGCCGTCCACTGCGCCATCCTTCCCTTCACCCACCCGGAACC 592
Query 593 CTGAGGTGAGAACGCCCAAGTCAGCAACTCAGCCACAAACAACAGAAACTAATCTCCAAACTGCTCCTAAACTT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGAGGTGAGAACGCCCAAGTCAGCAACTCAGCCACAAACAACAGAAACTAATCTCCAAACTGCTCCTAAACTT 666
Query 667 TCTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAAATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAAATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAA 740
Query 741 TGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCTCGAGATACTTGTGCAAGTGCCCAAATGAGTTTA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCTCGAGATACTTGTGCAAGTGCCCAAATGAGTTTA 814
Query 815 CTGGTGATCGCTGCCAAAACTACGTAATGGCCAGCTTCTACA--------------GTACGTCCACTCCCTTTC 874
|||||||||||||||||||||||||||||||||||||||||| |.| |||.
Sbjct 815 CTGGTGATCGCTGCCAAAACTACGTAATGGCCAGCTTCTACAAGCATCTTGGGATTGAA-----------TTTA 877
Query 875 TG-----------TCTCTGCCTGAA------------------------------------------------- 888
|| .||.|.||.|||
Sbjct 878 TGGAGGCGGAGGAGCTGTACCAGAAGAGAGTGCTGACCATAACCGGCATCTGCATCGCCCTCCTTGTGGTCGGC 951
Query 889 -------------------------------------------------------------------------- 888
Sbjct 952 ATCATGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGCGGAAAAAGCTGCATGACCGTCTTCGGCAGAGCCT 1025
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1026 TCGGTCTGAACGAAACAATATGATGAACATTGCCAATGGGCCTCACCATCCTAACCCACCCCCCGAGAATGTCC 1099
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1100 AGCTGGTGAATCAATACGTATCTAAAAACGTCATCTCCAGTGAGCATATTGTTGAGAGAGAAGCAGAGACATCC 1173
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1174 TTTTCCACCAGTCACTATACTTCCACAGCCCATCACTCCACTACTGTCACCCAGACTCCTAGCCACAGCTGGAG 1247
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1248 CAACGGACACACTGAAAGCATCCTTTCCGAAAGCCACTCTGTAATCGTGATGTCATCCGTAGAAAACAGTAGGC 1321
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1322 ACAGCAGCCCAACTGGGGGCCCAAGAGGACGTCTTAATGGCACAGGAGGCCCTCGTGAATGTAACAGCTTCCTC 1395
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1396 AGGCATGCCAGAGAAACCCCTGATTCCTACCGAGACTCTCCTCATAGTGAAAGGTATGTGTCAGCCATGACCAC 1469
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1470 CCCGGCTCGTATGTCACCTGTAGATTTCCACACGCCAAGCTCCCCCAAATCGCCCCCTTCGGAAATGTCTCCAC 1543
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1544 CCGTGTCCAGCATGACGGTGTCCATGCCTTCCATGGCGGTCAGCCCCTTCATGGAAGAAGAGAGACCTCTACTT 1617
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1618 CTCGTGACACCACCAAGGCTGCGGGAGAAGAAGTTTGACCATCACCCTCAGCAGTTCAGCTCCTTCCACCACAA 1691
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1692 CCCCGCGCATGACAGTAACAGCCTCCCTGCTAGCCCCTTGAGGATAGTGGAGGATGAGGAGTATGAAACGACCC 1765
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1766 AAGAGTACGAGCCAGCCCAAGAGCCTGTTAAGAAACTCGCCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAAT 1839
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1840 GGCCACATTGCTAACAGATTGGAAGTGGACAGCAACACAAGCTCCCAGAGCAGTAACTCAGAGAGTGAAACAGA 1913
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1914 AGATGAAAGAGTAGGTGAAGATACGCCTTTCCTGGGCATACAGAACCCCCTGGCAGCCAGTCTTGAGGCAACAC 1987
Query 889 -------------------------------------------------------------------------- 888
Sbjct 1988 CTGCCTTCCGCCTGGCTGACAGCAGGACTAACCCAGCAGGCCGCTTCTCGACACAGGAAGAAATCCAGGCCAGG 2061
Query 889 --------------------------------------- 888
Sbjct 2062 CTGTCTAGTGTAATTGCTAACCAAGACCCTATTGCTGTA 2100
