Nucleotide Global Alignment

Description

• Query: ccsbBroad304_06364
• Subject: NM_001322207.2
• Aligned Length: 1460
• Identities: 870
• Gaps: 583

Alignment

Query    1  ATGGAGATTTATTCCCCAGACATGTCTGAGGTCGCCGCCGAGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAGATTTATTCCCCAGACATGTCTGAGGTCGCCGCCGAGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGC  74

Query   75  AGACCCATCTCTTGATGGGCTTCCGGCAGCAGAAGACATGCCAGAGCCCCAGACTGAAGATGGGAGAACCCCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGACCCATCTCTTGATGGGCTTCCGGCAGCAGAAGACATGCCAGAGCCCCAGACTGAAGATGGGAGAACCCCTG  148

Query  149  GACTCGTGGGCCTGGCCGTGCCCTGCTGTGCGTGCCTAGAAGCTGAGCGCCTGAGAGGTTGCCTCAACTCAGAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GACTCGTGGGCCTGGCCGTGCCCTGCTGTGCGTGCCTAGAAGCTGAGCGCCTGAGAGGTTGCCTCAACTCAGAG  222

Query  223  AAAATCTGCATTGTCCCCATCCTGGCTTGCCTGGTCAGCCTCTGCCTCTGCATCGCCGGCCTCAAGTGGGTATT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAAATCTGCATTGTCCCCATCCTGGCTTGCCTGGTCAGCCTCTGCCTCTGCATCGCCGGCCTCAAGTGGGTATT  296

Query  297  TGTGGACAAGATCTTTGAATATGACTCTCCTACTCACCTTGACCCTGGGGGGTTAGGCCAGGACCCTATTATTT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGTGGACAAGATCTTTGAATATGACTCTCCTACTCACCTTGACCCTGGGGGGTTAGGCCAGGACCCTATTATTT  370

Query  371  CTCTGGACGCAACTGCTGCCTCAGCTCTGTGGGTGTCGTCTGAGGCATACACTTCACCTGTCTCTAGGGCTCAA  444
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTCTGGACGCAACTGCTGCCTCAGCTGTGTGGGTGTCGTCTGAGGCATACACTTCACCTGTCTCTAGGGCTCAA  444

Query  445  TCTGAAAGTGAGGTTCAAGTTACAGTGCAAGGTGACAAGGCTGTTGTCTCCTTTGAACCATCAGCGGCACCGAC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCTGAAAGTGAGGTTCAAGTTACAGTGCAAGGTGACAAGGCTGTTGTCTCCTTTGAACCATCAGCGGCACCGAC  518

Query  519  ACCGAAGAATCGTATTTTTGCCTTTTCTTTCTTGCCGTCCACTGCGCCATCCTTCCCTTCACCCACCCGGAACC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACCGAAGAATCGTATTTTTGCCTTTTCTTTCTTGCCGTCCACTGCGCCATCCTTCCCTTCACCCACCCGGAACC  592

Query  593  CTGAGGTGAGAACGCCCAAGTCAGCAACTCAGCCACAAACAACAGAAACTAATCTCCAAACTGCTCCTAAACTT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGAGGTGAGAACGCCCAAGTCAGCAACTCAGCCACAAACAACAGAAACTAATCTCCAAACTGCTCCTAAACTT  666

Query  667  TCTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAAATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAAATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAA  740

Query  741  TGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCTCGAGATACTTGTGCAAGTGCCCAAATGAGTTTA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCTCGAGATACTTGTGCAAGTGCCCAAATGAGTTTA  814

Query  815  CTGGTGATCGCTGCCAAAACTACGTAATGGCCAGCTTCTACA--------------GTACGTCCACTCCCTTTC  874
            ||||||||||||||||||||||||||||||||||||||||||              |.|           |||.
Sbjct  815  CTGGTGATCGCTGCCAAAACTACGTAATGGCCAGCTTCTACAAGCATCTTGGGATTGAA-----------TTTA  877

Query  875  TG-----------TCTCTGCCTGAA-------------------------------------------------  888
            ||           .||.|.||.|||                                                 
Sbjct  878  TGGAGGCGGAGGAGCTGTACCAGAAGAGAGTGCTGACCATAACCGGCATCTGCATCGCCCTCCTTGTGGTCGGC  951

Query  889  --------------------------------------------------------------------------  888
                                                                                      
Sbjct  952  ATCATGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGCGGAAAAAGCTGCATGACCGTCTTCGGCAGAGCCT  1025

Query  889  --------------------------------------------------------------------------  888
                                                                                      
Sbjct 1026  TCGGTCTGAACGAAACAATATGATGAACATTGCCAATGGGCCTCACCATCCTAACCCACCCCCCGAGAATGTCC  1099

Query  889  --------------------------------------------------------------------------  888
                                                                                      
Sbjct 1100  AGCTGGTGAATCAATACGTATCTAAAAACGTCATCTCCAGTGAGCATATTGTTGAGAGAGAAGCAGAGACATCC  1173

Query  889  --------------------------------------------------------------------------  888
                                                                                      
Sbjct 1174  TTTTCCACCAGTCACTATACTTCCACAGCCCATCACTCCACTACTGTCACCCAGACTCCTAGCCACAGCTGGAG  1247

Query  889  --------------------------------------------------------------------------  888
                                                                                      
Sbjct 1248  CAACGGACACACTGAAAGCATCCTTTCCGAAAGCCACTCTGTAATCGTGATGTCATCCGTAGAAAACAGTAGGC  1321

Query  889  --------------------------------------------------------------------------  888
                                                                                      
Sbjct 1322  ACAGCAGCCCAACTGGGGGCCCAAGAGGACGTCTTAATGGCACAGGAGGCCCTCGTGAATGTAACAGCTTCCTC  1395

Query  889  ------------------------------------------------------  888
                                                                  
Sbjct 1396  AGGCATGCCAGAGAAACCCCTGATTCCTACCGAGACTCTCCTCATAGTGAAAGG  1449