Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06376
Subject:
XM_017010814.1
Aligned Length:
1340
Identities:
609
Gaps:
649

Alignment

Query    1  ATGGTAGATGGAACCCTCCTTTTACTCCTCTCGGAGGCCCTGGCCCTTACCCAGACCTGGGCGGGCTCCCACTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTTGAAGTATTTCCACACTTCCGTGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCTCTGTGGGCTACGTGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACGACACCCAGTTCGTGCGCTTCGACAACGACGCCGCGAGTCCGAGGATGGTGCCGCGGGCGCCGTGGATGGAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CAGGAGGGGTCAGAGTATTGGGACCGGGAGACACGGAGCGCCAGGGACACCGCACAGATTTTCCGAGTGAACCT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GCGGACGCTGCGCGGCTACTACAATCAGAGCGAGGCCGGGTCTCACACCCTGCAGTGGATGCATGGCTGCGAGC  370
                                                                      |||.||||||||||..
Sbjct    1  ----------------------------------------------------------ATGAATGGCTGCGACA  16

Query  371  TGGGGCCCGACAGGCGCTTCCTCCGCGGGTATGAACAGTTCGCCTACGACGGCAAGGATTATCTCACCCTGAAT  444
            |||||||||||.|.|||.||||||||||||||.|.|||..|||.|||||||||||||||||..||.|||||||.
Sbjct   17  TGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGATTACATCTCCCTGAAC  90

Query  445  GAGGACCTGCGCTCCTGGACCGCGGTGGACACGGCGGCTCAGATCTCCGAGCAAAAGTCAAATGATGC--CTCT  516
            |||||||||||||||||||||||||.||||||.|.||||||||||.||.|||              ||  ||.|
Sbjct   91  GAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGC--------------GCTTCTAT  150

Query  517  GAGGCGGAGCA----CCAGA-GAG-------CCTACCTGGAAGACACATGCGTGGAGTGGCTCCACAAATACCT  578
            |||||.|||.|    .|||| |||       ||||||||||.|.|...|||.||||||.|||||.||.||||.|
Sbjct  151  GAGGCAGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCAGATACTT  224

Query  579  GGAGAAGGGGAAGGAGACGCTGCTTCACCTGGAGCCCCCAAAGACACACGTGACTCACCACCCCATCTCTGACC  652
            ||||||.||||||||||||||.|..|.|...||.||.||||||.|||||||..|.|||||||||||||||||||
Sbjct  225  GGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCACCACCCCATCTCTGACC  298

Query  653  ATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCAGGATGGG  726
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||.|||||||
Sbjct  299  ATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGACCTGGCAGCGGGATGGG  372

Query  727  GAGGGCCATACCCAGGACACGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCAGC  800
            ||||..||.|||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  373  GAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCCGC  446

Query  801  TGTGGTGGTGCCTTCTGGAGAGGAGCAGAGATACACGTGCCATGTGCAGCATGAGGGGCTACCCGAGCCCGTCA  874
            |||||||||||||.||||||||||.|||||||||||.||||||||||||||.||||||||.|||.|||||.|||
Sbjct  447  TGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGGCTGCCCCAGCCCCTCA  520

Query  875  CCCTGAGATGGAAGCCGGCTTCCCAGCCCACCATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCTCCTTGGA  948
            .||||||||||.|||.|.||.|||||||||||||||||||||||||||||.||||||||||.|||.||||||||
Sbjct  521  TCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGTCCTTGGA  594

Query  949  TCTGTGGTCTCTGGAGCTGTGGTTGCTGCTGTGATATGGAGGAAGAAGAGCTCAGGTGGAAAAGGAGGGAGCTA  1022
            .||||||||.|||||||||||||.|||||||||||.|||||||||||||||||||.|.||||..||||||||||
Sbjct  595  GCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATAGAAACAGAGGGAGCTA  668

Query 1023  CTCTAAGGCTG----------AGTGG--AGCG--------------ACA--GTG---------------CCCAG  1053
            ||||.||||||          |||||  ||||              |||  |||               ||..|
Sbjct  669  CTCTCAGGCTGCAGCCTACTCAGTGGTCAGCGGAAACTTGATGATAACATGGTGGTCAAGCTTATTTCTCCTGG  742

Query 1054  GGGT-CT-------------------------------------------------------------------  1059
            |||| ||                                                                   
Sbjct  743  GGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCGGAAGGTGGGTGACATG  816

Query 1060  --------------------------------------------------------------------------  1059
                                                                                      
Sbjct  817  TGGATCTTGTTTTTTTTGTGGCTGTGGACATCTTTCAACACTGCCTTCTTGGCCTTGCAAAGCCTTCGCTTTGG  890

Query 1060  --------------------------------------------------------------------------  1059
                                                                                      
Sbjct  891  CTTCGGCTTTAGGAGGGGCAGGAGCTTCCTTCTTCGTTCTTGGCACCATCTTATGAAAAGGGTCCAGATTAAGA  964

Query 1060  --------  1059
                    
Sbjct  965  TTTTTGAC  972