Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06508
Subject:
NM_010664.2
Aligned Length:
1308
Identities:
1086
Gaps:
57

Alignment

Query    1  ATGAGCTTCACCACTCGCT---CCACCTTCTCCACCAACTACCGGTCCCTGGGCTCTGTCCAGGCG----CCCA  67
            |||||||||||.|||||||   |||||||||||||||||||||||||||||||||||||    |||    ||||
Sbjct    1  ATGAGCTTCACAACTCGCTCCACCACCTTCTCCACCAACTACCGGTCCCTGGGCTCTGT----GCGAACTCCCA  70

Query   68  GCTA-CGGCGCCCGGCCGGTCAGCAGCGCGGCCAGCGTCTATGCAGGCGCTGGGGGCTCTGGTTCCCGGATCTC  140
            ||.| ||| |.||||||.|.|||||||||.|||||||||||||||||.|||||||||||.||.||||||||.||
Sbjct   71  GCCAGCGG-GTCCGGCCTGCCAGCAGCGCAGCCAGCGTCTATGCAGGTGCTGGGGGCTCCGGGTCCCGGATATC  143

Query  141  CGTGTCCCGCTCCACCAGCT-TCAGGGGCGGC---ATGGGGTCCGGGGGCCTGGCCACCGGGATAGCCGGGGGT  210
            |||||||||||       || ||.||||.|||   .|||||||||..|||                        
Sbjct  144  CGTGTCCCGCT-------CTGTCTGGGGTGGCTCTGTGGGGTCCGCAGGC------------------------  186

Query  211  CTGGCAGGAATGGGAGGCATCCAGAACGAGAAGGAGACCATGCAAAGCCTGAACGACCGCCTGGCCTCTTACCT  284
            |||||.||||||||.||.|||||||.|||||||||||||||||||..|||||||||.|||||||||...|||||
Sbjct  187  CTGGCGGGAATGGGTGGAATCCAGACCGAGAAGGAGACCATGCAAGACCTGAACGATCGCCTGGCCAGCTACCT  260

Query  285  GGACAGAGTGAGGAGCCTGGAGACCGAGAACCGGAGGCTGGAGAGCAAAATCCGGGAGCACTTGGAGAAGAAGG  358
            .||||..||||.|||||||||.||.||||||.||||.||||||||||||||||||||.||..||||||||||||
Sbjct  261  AGACAAGGTGAAGAGCCTGGAAACTGAGAACAGGAGACTGGAGAGCAAAATCCGGGAACATCTGGAGAAGAAGG  334

Query  359  GACCCCAG---GTCAGAGACTGGAGCCATTACTTCAAGATCATCGAGGACCTGAGGGCTCAGATCTTCGCAAAT  429
            |.||||||   ||||||||||||.||||.|||||||||||||||||.||||||||||||||||||||.||.|||
Sbjct  335  GGCCCCAGGGCGTCAGAGACTGGGGCCACTACTTCAAGATCATCGAAGACCTGAGGGCTCAGATCTTTGCGAAT  408

Query  430  ACTGTGGACAATGCCCGCATCGTTCTGCAGATTGACAATGCCCGTCTTGCTGCTGATGACTTTAGAGTCAAGCA  503
            .||||||||||||||||||||||..|||||||.|||||||||||.|||||.||.||||||||||||||||||.|
Sbjct  409  TCTGTGGACAATGCCCGCATCGTCTTGCAGATCGACAATGCCCGCCTTGCCGCCGATGACTTTAGAGTCAAGTA  482

Query  504  TGAGACAGAGCTGGCCATGCGCCAGTCTGTGGAGAACGACATCCATGGGCTCCGCAAGGTCATTGATGACACCA  577
            |||||||||.||.||||||||||||||||||||||.||||||||||||.|||||||||||..|.||||||||||
Sbjct  483  TGAGACAGAACTAGCCATGCGCCAGTCTGTGGAGAGCGACATCCATGGACTCCGCAAGGTGGTAGATGACACCA  556

Query  578  ATATCACACGACTGCAGCTGGAGACAGAGATCGAGGCTCTCAAGGAGGAGCTGCTCTTCATGAAGAAGAACCAC  651
            |.||||||.|.|||||||||||||||||.||||||||.||||||||.||.||.||.||||||||||||||.||.
Sbjct  557  ACATCACAAGGCTGCAGCTGGAGACAGAAATCGAGGCACTCAAGGAAGAACTTCTGTTCATGAAGAAGAATCAT  630

Query  652  GAAGAGGAAGTAAAAGGCCTACAAGCCCAGATTGCCAGCTCTGGGTTGACCGTGGAGGTAGATGCCCCCAAATC  725
            |||||||||||..||||.||..||||||||||||||||||||||.|||||.|||||.||.||||||||||||||
Sbjct  631  GAAGAGGAAGTCCAAGGTCTGGAAGCCCAGATTGCCAGCTCTGGATTGACTGTGGAAGTGGATGCCCCCAAATC  704

Query  726  TCAGGACCTCGCCAAGATCATGGCAGACATCCGGGCCCAATATGACGAGCTGGCTCGGAAGAACCGAGAGGAGC  799
            ||||||||||..||||||||||||.||||||||.|||||.|||||.|.||||||||.|||||||||.|||||.|
Sbjct  705  TCAGGACCTCAGCAAGATCATGGCGGACATCCGCGCCCAGTATGAAGCGCTGGCTCAGAAGAACCGCGAGGAAC  778

Query  800  TAGACAAGTACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGTCACCACACAGTCTGCTGAGGTTGGAGCT  873
            |.||||||||||||||||||||||||||||||||.||||||||.||||||||..|||||||.||..|..|.|..
Sbjct  779  TGGACAAGTACTGGTCTCAGCAGATTGAGGAGAGTACCACAGTTGTCACCACCAAGTCTGCCGAAATCAGGGAC  852

Query  874  GCTGAGACGACGCTCACAGAGCTGAGACGTACAGTCCAGTCCTTGGAGATCGACCTGGACTCCATGAGAAATCT  947
            ||||||||.||.|||||.|||||||||||.||..|||||.||||||||||.|||.||||||||||||.|||.|.
Sbjct  853  GCTGAGACCACACTCACGGAGCTGAGACGCACCCTCCAGACCTTGGAGATTGACTTGGACTCCATGAAAAACCA  926

Query  948  GAAGGCCAGCTTGGAGAACAGCCTGAGGGAGGTGGAGGCCCGCTAC---GCCCTACAGATGGAGCAGCTCAACG  1018
            |||...||.|||||||||||||||..||||.|||||||||||.|||   ||   ||||||||||||||||||.|
Sbjct  927  GAACATCAACTTGGAGAACAGCCTCGGGGATGTGGAGGCCCGATACAAGGC---ACAGATGGAGCAGCTCAATG  997

Query 1019  GGATCCTGCTGCACCTTGAGTCAGAGCTGGCACAGACCCGGGCAGAGGGACAGCGCCAGGCCCAGGAGTATGAG  1092
            ||.||||.|||||.||.|||||||||||||||||.||.|||||||||||.|||||||||||||||||.|||||.
Sbjct  998  GGGTCCTTCTGCATCTGGAGTCAGAGCTGGCACAAACTCGGGCAGAGGGCCAGCGCCAGGCCCAGGAATATGAA  1071

Query 1093  GCCCTGCTGAACATCAAGGTCAAGCTGGAGGCTGAGATCGCCACCTACCGCCGCCTGCTGGAAGATGGCGAGGA  1166
            |||||..|||||||||||||.|||||.|||||.|||||.|||||||||||||||.|||||||.|||||.||.||
Sbjct 1072  GCCCTCTTGAACATCAAGGTGAAGCTTGAGGCAGAGATTGCCACCTACCGCCGCTTGCTGGAGGATGGAGAAGA  1145

Query 1167  CTTTAATCTTGGTGATGCCTTGGACAGCAGCAACTCCATGCAAACCATCCAAAAGACCACCACCCGCCGGATAG  1240
            .||.|.|||....||||||.|||||..||||||||||||||||||..|.||.|||||.||.|||||...|||.|
Sbjct 1146  TTTCAGTCTCAACGATGCCCTGGACTCCAGCAACTCCATGCAAACTGTGCAGAAGACAACTACCCGTAAGATCG  1219

Query 1241  TGGATGGCAAAGTGGTGTCTGAGACCAATGACACCAAAGTTCTGAGGCAT  1290
            |||||||||.|||||||||.|||||.||||||||||.||||||||||||.
Sbjct 1220  TGGATGGCAGAGTGGTGTCCGAGACTAATGACACCAGAGTTCTGAGGCAC  1269

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