Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06549
- Subject:
- XM_024451173.1
- Aligned Length:
- 1404
- Identities:
- 974
- Gaps:
- 132
Alignment
Query 1 ATGTCGTCCATCCTGCCTTTCACTCCCCCGATCGTGAAGCGCCTGCTGGGCTGGAAGAAG-------------- 60
||||||||||||.||||.|||||.||.||..|.||||||.|.||||||||.|||||||||
Sbjct 1 ATGTCGTCCATCTTGCCATTCACGCCGCCAGTTGTGAAGAGACTGCTGGGATGGAAGAAGTCAGCTGGTGGGTC 74
Query 61 ----------------GGCGAGCAGAACGGGCAGGAGGAGAAATGGTGCGAGAAGGCGGTCAAGAGCCTGGTCA 118
||.||||||||.||||||||.||.||.|||||.|||||.||.||.||.||.|||||.|
Sbjct 75 TGGAGGAGCAGGCGGAGGAGAGCAGAATGGGCAGGAAGAAAAGTGGTGTGAGAAAGCAGTGAAAAGTCTGGTGA 148
Query 119 AGAAACTCAAGAAGACGGGGCAGCTGGACGAGCTGGAGAAGGCCATCACCACGCAGAAC-GT------------ 179
||||.||.|||||.||.||.|...|.||.|||||.|||||.|||||||||||.||.||| ||
Sbjct 149 AGAAGCTAAAGAAAACAGGACGATTAGATGAGCTTGAGAAAGCCATCACCACTCAAAACTGTAATACTAAATGT 222
Query 180 ----CAACACCAAG----TGC------AT--------------CACC-----------ATC------------- 201
|.|.|||||| ||| || |||| |||
Sbjct 223 GTTACCATACCAAGCACTTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGATCAGTGGGATACAAC 296
Query 202 -------------------------CCCAGGTCCCTGGATGGCCGGTTGCAGGTGTCCCATCGGAAGGGGCTCC 250
.|||||||.||.|||||.||..|.|||||.||||||||.||.||..|.|
Sbjct 297 AGGCCTTTACAGCTTCTCTGAACAAACCAGGTCTCTTGATGGTCGTCTCCAGGTATCCCATCGAAAAGGATTGC 370
Query 251 CTCATGTCATCTACTGCCGCCTGTGGCGATGGCCAGACCTGCACAGCCACCACGAGCTGCGGGCCATGGAGCTG 324
|.|||||.||.||.|||||..|.|||||.|||||.||.||.|||||.||.||.||.||...|||.||.||....
Sbjct 371 CACATGTTATATATTGCCGATTATGGCGCTGGCCTGATCTTCACAGTCATCATGAACTCAAGGCAATTGAAAAC 444
Query 325 TGTGAGTTCGCCTTCAATATGAAGAAGGACGAGGTCTGCGTGAATCCCTACCACTACCAGAGAGTAGAGACACC 398
||.||.|..||.||.|||.|.||.|||||.||.||.||.||.||.||.||||||||.||||||||.||||||||
Sbjct 445 TGCGAATATGCTTTTAATCTTAAAAAGGATGAAGTATGTGTAAACCCTTACCACTATCAGAGAGTTGAGACACC 518
Query 399 AGTTCTACCTCCTGTGTTGGTGCCACGCCACACAGAGATCCCGGCCGAGTTCCCCCCACTGGACGACTACAGCC 472
||||.|.|||||.||.||.|||||.||.|||||.|||||||...|.||..|.||.||.|||||.|||||.|..|
Sbjct 519 AGTTTTGCCTCCAGTATTAGTGCCCCGACACACCGAGATCCTAACAGAACTTCCGCCTCTGGATGACTATACTC 592
Query 473 ATTCCATCCCCGAAAACACTAACTTCCCCGCAGGCATCGAGCCCCAGAGCA---ATATTCCAGAGACCCCACCC 543
|.|||||.||.|||||||||||||||||.|||||.||.|||||.|||||.| ||||||||||.||.|||||.
Sbjct 593 ACTCCATTCCAGAAAACACTAACTTCCCAGCAGGAATTGAGCCACAGAGTAATTATATTCCAGAAACGCCACCT 666
Query 544 CCTGGCTACCTGAGTGAAGATGGAGAAACCAGTGACCACCAGATGAACCACAGCATGGACGCAGGTTCTCCA-- 615
|||||.||..|.|||||||||||||||||.||||||||.|||.||||.||.||.||||||.||||.||||||
Sbjct 667 CCTGGATATATCAGTGAAGATGGAGAAACAAGTGACCAACAGTTGAATCAAAGTATGGACACAGGCTCTCCAGC 740
Query 616 --AACCTATCCCCGAATCCGATGTCCCCAGCACATAATAACTTGGACCTGCAGCCAGTTACCTACTGCGAGCCG 687
|| |||||.||.|.|.|..|.|||||.|...||.|||.||||||..|.|||||||||||.||||..||.||.
Sbjct 741 AGAA-CTATCTCCTACTACTCTTTCCCCTGTTAATCATAGCTTGGATTTACAGCCAGTTACTTACTCAGAACCT 813
Query 688 GCCTTCTGGTGCTCCATCTCCTACTACGAGCTGAACCAGCGCGTCGGGGAGACATTCCACGCCTCGCAGCCATC 761
||.||.|||||.||.||..|.||.||.||..|.||.|||.|.||.||.||.||.|||||.||.||.|||||.||
Sbjct 814 GCATTTTGGTGTTCGATAGCATATTATGAATTAAATCAGAGGGTTGGAGAAACCTTCCATGCATCACAGCCCTC 887
Query 762 CATGACTGTGGATGGCTTCACCGACCCCTCCAATTCGGAGCGCTTCTGCCTAGGGCTGCTCTCCAATGTCAACA 835
..|.|||||.||||||||.||.|||||.||.|||||.|||.|.||||||.||||..|.|||||||||||.|||.
Sbjct 888 ACTCACTGTAGATGGCTTTACAGACCCATCAAATTCAGAGAGGTTCTGCTTAGGTTTACTCTCCAATGTTAACC 961
Query 836 GGAATGCAGCAGTGGAGCTGACACGGAGACACATCGGAAGAGGCGTGCGGCTCTACTACATCGGAGGGGAGGTC 909
|.|||||..|.||.||..|||||.|.||.||.||.||||||||.|||||..|.||||||||.||.|||||.||.
Sbjct 962 GAAATGCCACGGTAGAAATGACAAGAAGGCATATAGGAAGAGGAGTGCGCTTATACTACATAGGTGGGGAAGTT 1035
Query 910 TTCGCAGAGTGCCTCAGTGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAACCAGCGCTATGGCTGGCACCC 983
||.||.||||||||.|||||.||.||.||.|||||.|||...|||||.|||||.|||.|.||||||||||||||
Sbjct 1036 TTTGCTGAGTGCCTAAGTGATAGTGCAATCTTTGTGCAGAGCCCCAATTGTAATCAGAGATATGGCTGGCACCC 1109
Query 984 GGCCACCGTCTGCAAGATCCCACCAGGATGCAACCTGAAGATCTTCAACAACCAGGAGTTCGCTGCCCTCCTGG 1057
.||.||.||.||.||.||.||||||||.||.||.|||||||||||||||||||||||.||.|||||.||.||||
Sbjct 1110 TGCAACAGTGTGTAAAATTCCACCAGGCTGTAATCTGAAGATCTTCAACAACCAGGAATTTGCTGCTCTTCTGG 1183
Query 1058 CCCAGTCGGTCAACCAGGGCTTTGAGGCTGTCTACCAGTTGACCCGAATGTGCACCATCCGCATGAGCTTCGTC 1131
|.|||||.||.||.|||||.|||||.||.|||||.|||.|.||..|||||||||||||..|.|||||.||.||.
Sbjct 1184 CTCAGTCTGTTAATCAGGGTTTTGAAGCCGTCTATCAGCTAACTAGAATGTGCACCATAAGAATGAGTTTTGTG 1257
Query 1132 AAAGGCTGGGGAGCGGAGTACAGGAGACAGACTGTGACCAGTACCCCCTGCTGGATTGAGCTGCACCTGAATGG 1205
|||||.||||||||.||.|||.|.||.|||||.||.||.|||||.||.|||||||||||.||.||.||||||||
Sbjct 1258 AAAGGGTGGGGAGCAGAATACCGAAGGCAGACGGTAACAAGTACTCCTTGCTGGATTGAACTTCATCTGAATGG 1331
Query 1206 GCCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGATGGGCTCCCC--AAGCATCCGCTGTTCCAGTGTGTCT 1275
.|||.|.||||||.|.|||||.||..|.||.||||||||.||||| .|| |.||.||.||.||..||||.
Sbjct 1332 ACCTCTACAGTGGTTGGACAAAGTATTAACTCAGATGGGATCCCCTTCAG--TGCGTTGCTCAAGCATGTCA 1401