Nucleotide Global Alignment

Description

• Query: ccsbBroad304_06575
• Subject: NM_001365210.2
• Aligned Length: 1512
• Identities: 741
• Gaps: 750

Alignment

Query    1  ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA  74

Query   75  GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA  148

Query  149  GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA  222

Query  223  CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAACACAGAGGGTGCGACAGCCC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAACACAGAGGGTGCGACAGCCC  296

Query  297  AGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGAATTTGATA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGAATTTGATA  370

Query  371  ATATGATGCGGAATCATAAAATCGCACCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTCACAGTTCCAGTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATATGATGCGGAATCATAAAATCGCACCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTCACAGTTCCAGTG  444

Query  445  ACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGCAGCCAGCTCAAC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGCAGCCAGCTCAAC  518

Query  519  GTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTGGAGCTCCTCAGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTGGAGCTCCTCAGA  592

Query  593  GACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGC  666

Query  667  AGTCCAGTGGG-GAATGGATTTGTAAACTCAAGA----GCTTCTCCAAATTTGA-----TTGGAGCTACTGGTG  730
            ||||||||||| ..|||.|.|..|||    ||||    ||.||      .||||     ||..||| ||||   
Sbjct  667  AGTCCAGTGGGCCCATGTACTGCTAA----AAGAAGAGGCATC------CTTGAGACTTTTAAAGC-ACTG---  726

Query  731  CAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAATGAACAGT  804
             ||..|.||.|||.||.|         |||||.||                       ||||        .|.|
Sbjct  727  -AACGAACTCAGGAAAGG---------CAAAGACT-----------------------TCTT--------AAAT  759

Query  805  AGGAAACCAGA-----TCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACTAAATACCCAA  873
            |.|||||||.|     ||                                                        
Sbjct  760  AAGAAACCAAAGAAAGTC--------------------------------------------------------  777

Query  874  AGGATCAGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACAACCCCAAGCTTGCCTCC  947
                                                                                      
Sbjct  778  --------------------------------------------------------------------------  777

Query  948  GCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGACCAGCGCTGACCTGTCAG  1021
                                                                                      
Sbjct  778  --------------------------------------------------------------------------  777

Query 1022  CCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGCAGCAGCACCACCTAGGA  1095
                                                                                      
Sbjct  778  --------------------------------------------------------------------------  777

Query 1096  CAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTATCCATTAATACCAACCA  1169
                                                                                      
Sbjct  778  --------------------------------------------------------------------------  777

Query 1170  AAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATCGGGCTTCCAGCAGCAGC  1243
                                                                                      
Sbjct  778  --------------------------------------------------------------------------  777

Query 1244  AGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCCCGCAGCCCCAGCCCCGA  1317
                                                                                      
Sbjct  778  --------------------------------------------------------------------------  777

Query 1318  CAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGATGGCAGTGATCGGGAGGA  1391
                                                                                      
Sbjct  778  --------------------------------------------------------------------------  777

Query 1392  TCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGACAGAGAAAGCCCTTCTG  1465
                                                                                      
Sbjct  778  --------------------------------------------------------------------------  777

Query 1466  TAAAGCGAATGAGGATGGACGCGTGGGTTACC  1497
                                            
Sbjct  778  --------------------------------  777