Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06597
- Subject:
- NR_002307.1
- Aligned Length:
- 2163
- Identities:
- 736
- Gaps:
- 1363
Alignment
Query 1 -------------ATGGCT-------TCTC-CGTC---------------CA---AAGGCAATGACT--TGTTT 33
.|.||| ||.| |||| || ||||| |||.|| |||||
Sbjct 1 GTCGCCGCTGCGGGTTGCTAGCGGAGTCGCGCGTCGGGAGCTACGTAGGGCAGGGAAGGC-ATGGCTTCTGTTT 73
Query 34 TCGCCCGACGAGGAGGGCCCAGCAGTGGTGGCCGGACCAGGCCCGGGGCCTGGGGGCGCCGAGGGGGCCGCGGA 107
|||.||.|.|||.||||.|||||.||||.||.|||.|||||.|||||||||||||.||||||||.|||||||||
Sbjct 74 TCGTCCAATGAGAAGGGGCCAGCGGTGGCGGTCGGGCCAGGTCCGGGGCCTGGGGACGCCGAGGCGGCCGCGGA 147
Query 108 GGAGCGCCGCGTCAAGGTCTCCAGCCTGCCCTTCAGCGTGGAGGCGCTCATGTCCGACAAGAAGCCGCCCAAGG 181
||||||||||||||||||||||||||||||||.|||.|||||.||||||.||||.|||||||||||||||||||
Sbjct 148 GGAGCGCCGCGTCAAGGTCTCCAGCCTGCCCTACAGTGTGGATGCGCTCGTGTCGGACAAGAAGCCGCCCAAGG 221
Query 182 AGGCGTCCCCGCTGCCGGCCGAAAGCGCCTCGGCCGGGGCCACCCTGCGGCCACTGCTGCTGTCGGGGCACGGC 255
||||.|||||..||||||||.||||||||||..||||||||||||||||||.||||||||||.|||||||||||
Sbjct 222 AGGCATCCCCAGTGCCGGCCAAAAGCGCCTCTTCCGGGGCCACCCTGCGGCTACTGCTGCTGCCGGGGCACGGC 295
Query 256 GCTCGGGAAGCGCACAGCCCCGGGCCGCTGGTGAAGCCCTTCGAGACCGCCTCGGTCAAGTCGGAAAA-TTCAG 328
||||||||||||||||||||||||||||||.|.||||||||||||||||||||||||||||.|||||| |.|..
Sbjct 296 GCTCGGGAAGCGCACAGCCCCGGGCCGCTGATCAAGCCCTTCGAGACCGCCTCGGTCAAGTGGGAAAACTCCCT 369
Query 329 AAGATGGAGCGGCGTGGATGCAGGAACCCGGCCGAT-ATTCGCCGCCGCCAAGACATACGAGCCCTACCACCTG 401
||||.||||||||||||||||||||||||.||.||| |||||||||||||||||||...|||||||||||||||
Sbjct 370 AAGACGGAGCGGCGTGGATGCAGGAACCCTGCTGATAATTCGCCGCCGCCAAGACACGTGAGCCCTACCACCTG 443
Query 402 CACCCTGAGGAAACACAAGACCAATCGGAAGCCGCGCACGCCCTTTACCACATCCCAGCTCCTCGCCCTGGAGC 475
|||||||||.||||||||||||||||.||||||||||||..||||||||||.||||||||||||||.||||||.
Sbjct 444 CACCCTGAGAAAACACAAGACCAATCCGAAGCCGCGCACAGCCTTTACCACGTCCCAGCTCCTCGCTCTGGAGG 517
Query 476 GCAAGTTCCGTCAGAAACAGTACCTCTCCATTGCAGAGCGTGCAGAGTTCTCCAGCTCTCTGAACCTCACAGAG 549
|||||||.|..|||||||||||||||||||||||||||.||||.||.|||||||||||||.|||||||||.|||
Sbjct 518 GCAAGTTGCTCCAGAAACAGTACCTCTCCATTGCAGAGGGTGCGGACTTCTCCAGCTCTCCGAACCTCACGGAG 591
Query 550 ACCCAGGTCAAAATCTGGTTCCAGAACCGAAGGGCCAAGGCGAAAAGACTGCAGGAGGCAGAACTGGAAAAGCT 623
||.|||||||||||||.||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||
Sbjct 592 ACTCAGGTCAAAATCTTGTTCCAGAACCGAAGGGCCAAGACGAAAAGACTGCAGGAGTCAGAACTGGAAAAGCT 665
Query 624 GAAAATGGCTGCAAAACCTATGCTGCCCTCCAGCTTCAGTCTCCCTTTCCCCATCAGCTCGCCCCTGCAGGCAG 697
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 GAAAATGGCTGCAAAACCTATGCTACCCTCCAGCTTCAGTCTCCCTTTCCCCATCAGCTCGCCCCTGCAGGCAG 739
Query 698 CGTCCATATATGGAGCATCCTACCCGTTCCATAGACCTGTGCTTCCCATCCCGCCTGTGGGACTCTATGCCACG 771
||||||||||.|.||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 740 CGTCCATATACGCAGCATCCTACCCGTTCCATAGACCTGTGCTTCCCATCCCGCCCGTGGGACTCTATGCCACG 813
Query 772 CCAGTGGGATATGGCATGTACCACCTGTCC-------------------------------------------- 801
||||||||||||||||||||||||||||||
Sbjct 814 CCAGTGGGATATGGCATGTACCACCTGTCCTAAGGAAGACCAGATCAATAGACTCCATGATGGATGTTTGTTTC 887
Query 802 -------------------------------------------------------------------------- 801
Sbjct 888 AAAGGGTTTCCTCTCCCTCTCCAAGAAGGCAGGACCAGCCAATACTCCTGTTCTGCAAACCCTGAGTGCACCAC 961
Query 802 -------------------------------------------------------------------------- 801
Sbjct 962 CCTAAGCGGCTAGGCCGGCAGGGCCACACGACACAGCTGAAGTTTGTTCTTTAGGCGGAGGCACCAAGCCTTGT 1035
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1036 TTTCTTGGTGTAATCTTCCAGGTGCCCCCTTCTCCTTTCACAAAGATTGGCTCTGATGGTTTTTATGTATAAAT 1109
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1110 ATATATATAATAAAATATAATACATTTGTATACAGTAGATGTAAAAATTCAAATTATTTTAAAAGGCAAAATTT 1183
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1184 ATATACATATGTGCTTTTTTCCTATATGTCACCTTCTTAAAGAGACTGTGTAAGTCCATTTGTTGTGTTTTCTT 1257
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1258 AAAGAGGGAGACAAATTATTTGCAAAACTTGCTAAAGTCAATGATTTTGATGGGATGATTGACTTCTGCTTATG 1331
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1332 GAAAACAAATATTAGAATTGGACATAATGCACATAGAAAGTATTAGATATGGAGAGGTTTTTCAAAGTGAAGGG 1405
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1406 GACACATCACATTTCTGCATTTTACTTGCATTAAAAGAAACCTTTTTATATACTACCATATTTGTTCCTATCTC 1479
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1480 TCCCCACGCCCACCCCCCCCCCACACACACATTTTTACAGTTTTACCTTTTTGAAGAATTTTTTTTTTGTAAGA 1553
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1554 CCAATAACCGGGATGAGAAGAATCCTGAGAATGCCTGGAGGTGAGGTAGAAAATTAGAAATACTTCCTAATTCT 1627
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1628 TCTCAAGGCTGTTGCTTTACTTCATTTCAGATAATTGGAGAGTAAAAAGTTAAAGCCTGTTGGGAGGAGTTGAT 1701
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1702 GGTTTCTGAGAAATACTAGGTACTTTCATCCTCACAGATTGCAAAGATTATTTGGGTGGGGGGGTACAGTAATT 1775
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1776 TTCTGCTTAAAAAATGAGTACCTTGTAACCATTACCTGTATGCTAAATATTCTTGAACAATTGGTAGATCCAGA 1849
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1850 AAGAAAAAAAATTATGCTTTCTCTGTGTGTGTACCTGCTGTATATGCTAAACTTATTAGAAAATTTTATATACT 1923
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1924 TTTTAACATGTCCAGGGCAGAAGATAAAGCCATGTTTTGACTTGGTGAAAATGGAGTTGCCAAACAGCCCATTA 1997
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1998 AGCTCCCTGGTATTTCACCTTCCTCTCCATCTCTCCCATCCCTCCAGTATGCCTTTACCCCTTTGAAAGGGTGC 2071
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2072 CTTGTACAATTGTATATATTTTATTGAAGAGTTATTATATCTTATTCTGAATTAAATTAAACATGTTTTATTGC 2145
Query 802 ----------------- 801
Sbjct 2146 AAAAAAAAGAAGAGAAA 2162
