Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06603
Subject:
NM_001204293.2
Aligned Length:
819
Identities:
539
Gaps:
279

Alignment

Query   1  ATGACACCGGGCACCCAGTCTCCTTTCTTCCTGCTGCTGCTCCTCACAGTGCTTACAGTTGTTACAGGTTCTGG  74
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct   1  ATGACACCGGGCACCCAGTCTCCTTTCTTCCTGCTGCTGCTCCTCACAGTGCTTACAGTTGTTACGGGTTCTGG  74

Query  75  TCATGCAAGCTCTACCCCAGGTGGAGAAAAGGAGACTTCGGCTACCCAGAGAAGTTCAGTGCCCAGCTCTACTG  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  TCATGCAAGCTCTACCCCAGGTGGAGAAAAGGAGACTTCGGCTACCCAGAGAAGTTCAGTGCCCAGCTCTACTG  148

Query 149  AGAAGAATGCT------------------------------------------------------TTTAATTCC  168
           |||||||||||                                                      |||||||||
Sbjct 149  AGAAGAATGCTTTGTCTACTGGGGTCTCTTTCTTTTTCCTGTCTTTTCACATTTCAAACCTCCAGTTTAATTCC  222

Query 169  TCTCTGGAAGATCCCAGCACCGACTACTACCAAGAGCTGCAGAGAGACATTTCTGAAATGTTTTTGCAGATTTA  242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  TCTCTGGAAGATCCCAGCACCGACTACTACCAAGAGCTGCAGAGAGACATTTCTGAAATGTTTTTGCAGATTTA  296

Query 243  TAAACAAGGGGGTTTTCTGGGCCTCTCCAATATTAAGTTCAGGCCAGGATCTGTGGTGGTACAATTGACTCTGG  316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297  TAAACAAGGGGGTTTTCTGGGCCTCTCCAATATTAAGTTCAGGCCAGGATCTGTGGTGGTACAATTGACTCTGG  370

Query 317  CCTTCCGAGAAGGTACCATCAATGTCCACGACGTGGAGACACAGTTCAATCAGTATAAAACGGAAGCAGCCTCT  390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371  CCTTCCGAGAAGGTACCATCAATGTCCACGACGTGGAGACACAGTTCAATCAGTATAAAACGGAAGCAGCCTCT  444

Query 391  CGATATAACCTGACGATCTCAGACGTCAGCGTGAGTGATGTGCCATTTCCTTTCTCTGCCCAGTCTGGGGCTGG  464
           ||||||||||||||||||||||||||||||                                            
Sbjct 445  CGATATAACCTGACGATCTCAGACGTCAGC--------------------------------------------  474

Query 465  GGTGCCAGGCTGGGGCATCGCGCTGCTGGTGCTGGTCTGTGTTCTGGTTGCGCTGGCCATTGTCTATCTCATTG  538
                                                                                     
Sbjct 475  --------------------------------------------------------------------------  474

Query 539  CCTTGGCTGTCTGTCAGTGCCGCCGAAAGAACTACGGGCAGCTGGACATCTTTCCAGCCCGGGATACCTACCAT  612
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475  ----GGCTGTCTGTCAGTGCCGCCGAAAGAACTACGGGCAGCTGGACATCTTTCCAGCCCGGGATACCTACCAT  544

Query 613  CCTATGAGCGAGTACCCCACCTACCACACCCATGGGCGCTATGTGCCCCCTAGCAGTACCGATCGTAGCCCCTA  686
           ||||||||||||||||||||||||||||||||||||||||||||||||||                        
Sbjct 545  CCTATGAGCGAGTACCCCACCTACCACACCCATGGGCGCTATGTGCCCCC------------------------  594

Query 687  TGAGAAGGTTTCTGCAGGTAATGGTGGCAGCAGCCTCTCTTACACAAACCCAGCAGTGGCAGCCACTTCTGCCA  760
                                                                                     
Sbjct 595  --------------------------------------------------------------------------  594

Query 761  ACTTG  765
                
Sbjct 595  -----  594